BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029885
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20785.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002280771.1| PREDICTED: cryptochrome DASH, chloroplastic/...   134   6e-30
emb|CAN79842.1| hypothetical protein VITISV_014519 [Vitis vinifera]   133   2e-29
ref|XP_003603524.1| Cryptochrome DASH [Medicago truncatula] gi|3...   131   5e-29
ref|XP_002527975.1| DNA photolyase, putative [Ricinus communis] ...   123   1e-26

>emb|CBI20785.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/107 (60%), Positives = 81/107 (75%), Gaps = 1/107 (0%)
 Frame = -2

Query: 318 SNHIHIMN-NIASNSQPKPHSSTTSFHVPSLSSDEVDQITNETFQRYTTSSNVERNGAGV 142
           S H H+   N    S+P   +S T+  VP L S+E+ +I  +TFQRY++S   +RNG+GV
Sbjct: 30  STHPHLSAMNFPPRSKPGSAASATTSEVPDLPSNEMGKIVEQTFQRYSSSDEAKRNGSGV 89

Query: 141 AIVWFRNDLRLLDNEALYRAWMSSEAVLPVYCVDPRLFGTTHHFRFP 1
           AIVWFRNDLR+LDNEAL +AW SS+AVLPVYCVDPRLFGTTH+F FP
Sbjct: 90  AIVWFRNDLRVLDNEALVKAWASSQAVLPVYCVDPRLFGTTHYFGFP 136


>ref|XP_002280771.1| PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial-like
           [Vitis vinifera]
          Length = 549

 Score =  134 bits (338), Expect = 6e-30
 Identities = 62/98 (63%), Positives = 77/98 (78%)
 Frame = -2

Query: 294 NIASNSQPKPHSSTTSFHVPSLSSDEVDQITNETFQRYTTSSNVERNGAGVAIVWFRNDL 115
           N    S+P   +S T+  VP L S+E+ +I  +TFQRY++S   +RNG+GVAIVWFRNDL
Sbjct: 2   NFPPRSKPGSAASATTSEVPDLPSNEMGKIVEQTFQRYSSSDEAKRNGSGVAIVWFRNDL 61

Query: 114 RLLDNEALYRAWMSSEAVLPVYCVDPRLFGTTHHFRFP 1
           R+LDNEAL +AW SS+AVLPVYCVDPRLFGTTH+F FP
Sbjct: 62  RVLDNEALVKAWASSQAVLPVYCVDPRLFGTTHYFGFP 99


>emb|CAN79842.1| hypothetical protein VITISV_014519 [Vitis vinifera]
          Length = 584

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/93 (65%), Positives = 76/93 (81%)
 Frame = -2

Query: 279 SQPKPHSSTTSFHVPSLSSDEVDQITNETFQRYTTSSNVERNGAGVAIVWFRNDLRLLDN 100
           S+P   +S T+  VP L S+E+ +I  +TFQRY++S   +RNG+GVAIVWFRNDLR+LDN
Sbjct: 63  SKPGSAASATTSEVPDLPSNEMGKIVEQTFQRYSSSDEAKRNGSGVAIVWFRNDLRVLDN 122

Query: 99  EALYRAWMSSEAVLPVYCVDPRLFGTTHHFRFP 1
           EAL +AW SS+AVLPVYCVDPRLFGTTH+F FP
Sbjct: 123 EALVKAWASSQAVLPVYCVDPRLFGTTHYFGFP 155


>ref|XP_003603524.1| Cryptochrome DASH [Medicago truncatula] gi|355492572|gb|AES73775.1|
           Cryptochrome DASH [Medicago truncatula]
          Length = 323

 Score =  131 bits (330), Expect = 5e-29
 Identities = 60/100 (60%), Positives = 79/100 (79%)
 Frame = -2

Query: 300 MNNIASNSQPKPHSSTTSFHVPSLSSDEVDQITNETFQRYTTSSNVERNGAGVAIVWFRN 121
           MN   + S+P   SS+   HVP L S+E++++ N+TFQRYT S+N +R+G G AIVWFRN
Sbjct: 47  MNLCTTKSEPSASSSSMQ-HVPELDSNEMERVANQTFQRYT-SNNTKRSGKGTAIVWFRN 104

Query: 120 DLRLLDNEALYRAWMSSEAVLPVYCVDPRLFGTTHHFRFP 1
           DLR+LDNE LY+AW+SS+ +LPVYC+DPRLF TT+HF FP
Sbjct: 105 DLRVLDNETLYKAWLSSQTLLPVYCIDPRLFATTYHFGFP 144


>ref|XP_002527975.1| DNA photolyase, putative [Ricinus communis]
           gi|223532601|gb|EEF34387.1| DNA photolyase, putative
           [Ricinus communis]
          Length = 576

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/104 (57%), Positives = 82/104 (78%), Gaps = 1/104 (0%)
 Frame = -2

Query: 309 IHIMNNIASNSQPKPHSSTTSFHVPS-LSSDEVDQITNETFQRYTTSSNVERNGAGVAIV 133
           + IMN+ +S+S     SS+ SF VP+ L SDE+ +I ++TFQ Y++ S ++R G G+ IV
Sbjct: 31  LSIMNHTSSSSSSS--SSSLSFQVPADLHSDEIKRIADQTFQNYSSKS-LKRKGKGICIV 87

Query: 132 WFRNDLRLLDNEALYRAWMSSEAVLPVYCVDPRLFGTTHHFRFP 1
           WFRNDLR+LDNE+L +AW+SS+++LPVYCVDPRLF TTHHF FP
Sbjct: 88  WFRNDLRILDNESLLQAWLSSDSLLPVYCVDPRLFHTTHHFAFP 131