BLASTX nr result

ID: Coptis23_contig00029863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029863
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
gb|ABD96949.1| hypothetical protein [Cleome spinosa]                   87   1e-15
gb|EEE59759.1| hypothetical protein OsJ_12247 [Oryza sativa Japo...    87   1e-15
gb|EEC76016.1| hypothetical protein OsI_13171 [Oryza sativa Indi...    87   1e-15
gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sat...    87   1e-15

>ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|222867101|gb|EEF04232.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 49/130 (37%), Positives = 76/130 (58%)
 Frame = +1

Query: 31  ILSALIDMYCKCSSVEEAERVFGNQIPLKHVSHWNAMISGYIDNGLLNNAIEHFTRIPER 210
           IL+ L++MY KC S+ +++++F +++P + +  WN +ISGY   GLL  A   F ++PER
Sbjct: 107 ILNRLLEMYAKCDSLMDSQKLF-DEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPER 165

Query: 211 NVVSWTAMISGYVKYGMPHEGLRLLAEMYSNKDSVVVQGNCVTFSVXXXXXXXXXXXXXG 390
           +  SWTAMISGYV++  P+E L L   M  + +S   + N  T S              G
Sbjct: 166 DNFSWTAMISGYVRHDRPNEALELFRMMKRSDNS---KSNKFTVSSALAAAAAVPCLRIG 222

Query: 391 KQIHAKLIRT 420
           K+IH  ++RT
Sbjct: 223 KEIHGYIMRT 232


>gb|ABD96949.1| hypothetical protein [Cleome spinosa]
          Length = 639

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/93 (46%), Positives = 63/93 (67%)
 Frame = +1

Query: 16  ESVTVILSALIDMYCKCSSVEEAERVFGNQIPLKHVSHWNAMISGYIDNGLLNNAIEHFT 195
           E  T I +AL+DMYCKC  V++A  +F +++  K+V  W +M+SGY  NG L+ A E F 
Sbjct: 247 EMTTKIGNALLDMYCKCGCVDKARAIF-DEMGNKNVICWTSMVSGYASNGSLDEARELFE 305

Query: 196 RIPERNVVSWTAMISGYVKYGMPHEGLRLLAEM 294
           R P R++V WTAMI+GYV++ +  E L+L  +M
Sbjct: 306 RSPVRDIVLWTAMINGYVQFNLFDEALKLFRKM 338


>gb|EEE59759.1| hypothetical protein OsJ_12247 [Oryza sativa Japonica Group]
          Length = 950

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 52/145 (35%), Positives = 80/145 (55%)
 Frame = +1

Query: 31  ILSALIDMYCKCSSVEEAERVFGNQIPLKHVSHWNAMISGYIDNGLLNNAIEHFTRIPER 210
           + SALIDMYCKC  + +A+ +F + +P K++  WN++ISGY +N  +  A E F ++P R
Sbjct: 415 VSSALIDMYCKCKQLPDAQMIFYS-LPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPAR 473

Query: 211 NVVSWTAMISGYVKYGMPHEGLRLLAEMYSNKDSVVVQGNCVTFSVXXXXXXXXXXXXXG 390
           NV SW ++ISGY +     + L+    M ++  S       +TFS              G
Sbjct: 474 NVASWNSIISGYAQNRQFIDALKSFHAMLASGQS----PGEITFSSVLLACASLCSLEMG 529

Query: 391 KQIHAKLIRTIGKADIHNVVVGTAL 465
           K +HAK+I+   K    ++ VGTAL
Sbjct: 530 KMVHAKIIKLGIK---ESIFVGTAL 551


>gb|EEC76016.1| hypothetical protein OsI_13171 [Oryza sativa Indica Group]
          Length = 950

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 52/145 (35%), Positives = 80/145 (55%)
 Frame = +1

Query: 31  ILSALIDMYCKCSSVEEAERVFGNQIPLKHVSHWNAMISGYIDNGLLNNAIEHFTRIPER 210
           + SALIDMYCKC  + +A+ +F + +P K++  WN++ISGY +N  +  A E F ++P R
Sbjct: 415 VSSALIDMYCKCKQLPDAQMIFYS-LPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPAR 473

Query: 211 NVVSWTAMISGYVKYGMPHEGLRLLAEMYSNKDSVVVQGNCVTFSVXXXXXXXXXXXXXG 390
           NV SW ++ISGY +     + L+    M ++  S       +TFS              G
Sbjct: 474 NVASWNSIISGYAQNRQFIDALKSFHAMLASGQS----PGEITFSSVLLACASLCSLEMG 529

Query: 391 KQIHAKLIRTIGKADIHNVVVGTAL 465
           K +HAK+I+   K    ++ VGTAL
Sbjct: 530 KMVHAKIIKLGIK---ESIFVGTAL 551


>gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 787

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 52/145 (35%), Positives = 80/145 (55%)
 Frame = +1

Query: 31  ILSALIDMYCKCSSVEEAERVFGNQIPLKHVSHWNAMISGYIDNGLLNNAIEHFTRIPER 210
           + SALIDMYCKC  + +A+ +F + +P K++  WN++ISGY +N  +  A E F ++P R
Sbjct: 415 VSSALIDMYCKCKQLPDAQMIFYS-LPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPAR 473

Query: 211 NVVSWTAMISGYVKYGMPHEGLRLLAEMYSNKDSVVVQGNCVTFSVXXXXXXXXXXXXXG 390
           NV SW ++ISGY +     + L+    M ++  S       +TFS              G
Sbjct: 474 NVASWNSIISGYAQNRQFIDALKSFHAMLASGQS----PGEITFSSVLLACASLCSLEMG 529

Query: 391 KQIHAKLIRTIGKADIHNVVVGTAL 465
           K +HAK+I+   K    ++ VGTAL
Sbjct: 530 KMVHAKIIKLGIK---ESIFVGTAL 551


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