BLASTX nr result

ID: Coptis23_contig00029838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029838
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634544.1| PREDICTED: uncharacterized protein LOC100254...    80   2e-13
emb|CBI18266.3| unnamed protein product [Vitis vinifera]               80   2e-13
emb|CAN79195.1| hypothetical protein VITISV_000237 [Vitis vinifera]    80   2e-13

>ref|XP_003634544.1| PREDICTED: uncharacterized protein LOC100254868 [Vitis vinifera]
          Length = 982

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 49/123 (39%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
 Frame = -2

Query: 402  SPINGDICTPV-QIHTSVNARGNSSGFSVNVEPRTPFVNLTN-SCSSDWHLSSGDQPKIT 229
            SPI+  + +P+ +   S  ARG++    +  E +TP  NLTN SCS DWHLSSGD+    
Sbjct: 804  SPISNGMHSPILRPDISAKARGSNPSSPIVEEVKTPLANLTNNSCSKDWHLSSGDKSASV 863

Query: 228  QHAPKFRRLRKYGECSKKDSSEIMKDVLTGPVSNIA-GSTTRANRVNRVRGKRKMETQAR 52
            +   KF+RLRKYG+  ++ + + MK+    P  N+A  S+    R    RGK+K     R
Sbjct: 864  KQERKFKRLRKYGDTGQRRNMKSMKENSIDPSGNLAETSSIIPIRNKHNRGKQKPVDNVR 923

Query: 51   AFI 43
            AFI
Sbjct: 924  AFI 926


>emb|CBI18266.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 49/123 (39%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
 Frame = -2

Query: 402  SPINGDICTPV-QIHTSVNARGNSSGFSVNVEPRTPFVNLTN-SCSSDWHLSSGDQPKIT 229
            SPI+  + +P+ +   S  ARG++    +  E +TP  NLTN SCS DWHLSSGD+    
Sbjct: 1119 SPISNGMHSPILRPDISAKARGSNPSSPIVEEVKTPLANLTNNSCSKDWHLSSGDKSASV 1178

Query: 228  QHAPKFRRLRKYGECSKKDSSEIMKDVLTGPVSNIA-GSTTRANRVNRVRGKRKMETQAR 52
            +   KF+RLRKYG+  ++ + + MK+    P  N+A  S+    R    RGK+K     R
Sbjct: 1179 KQERKFKRLRKYGDTGQRRNMKSMKENSIDPSGNLAETSSIIPIRNKHNRGKQKPVDNVR 1238

Query: 51   AFI 43
            AFI
Sbjct: 1239 AFI 1241


>emb|CAN79195.1| hypothetical protein VITISV_000237 [Vitis vinifera]
          Length = 808

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 49/123 (39%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
 Frame = -2

Query: 402 SPINGDICTPV-QIHTSVNARGNSSGFSVNVEPRTPFVNLTN-SCSSDWHLSSGDQPKIT 229
           SPI+  + +P+ +   S  ARG++    +  E +TP  NLTN SCS DWHLSSGD+    
Sbjct: 630 SPISNGMHSPILRPDISAKARGSNPSSPIVEEVKTPLANLTNNSCSKDWHLSSGDKSASV 689

Query: 228 QHAPKFRRLRKYGECSKKDSSEIMKDVLTGPVSNIA-GSTTRANRVNRVRGKRKMETQAR 52
           +   KF+RLRKYG+  ++ + + MK+    P  N+A  S+    R    RGK+K     R
Sbjct: 690 KQERKFKRLRKYGDTGQRRNMKSMKENSIDPSGNLAETSSIIPIRNKHNRGKQKPVDNVR 749

Query: 51  AFI 43
           AFI
Sbjct: 750 AFI 752


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