BLASTX nr result

ID: Coptis23_contig00029833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029833
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera]   145   3e-33
ref|XP_003551409.1| PREDICTED: uncharacterized protein LOC100819...   138   5e-31
ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267...   137   7e-31
emb|CBI37340.3| unnamed protein product [Vitis vinifera]              137   7e-31
ref|XP_003530866.1| PREDICTED: uncharacterized protein LOC100779...   132   2e-29

>emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera]
          Length = 2257

 Score =  145 bits (366), Expect = 3e-33
 Identities = 86/162 (53%), Positives = 97/162 (59%), Gaps = 2/162 (1%)
 Frame = -3

Query: 483  KERHKILMNWNXXXXXXXXXXXXXXXSYLSTLPGILKAVPDNCFNVCK-PMEEDTLKFHF 307
            KERHKILM+                  Y STLPGI K      F   + PM E+TLK HF
Sbjct: 1143 KERHKILMDRTAGDGADSAEDSGSSQPYPSTLPGIPKGSARQLFQHLQGPMLEETLKSHF 1202

Query: 306  EKIVLSVQKQHPYRTQSDKQGTK-LVPVHNSHIVAFSQVCPNTLS*VILMSLDLCDTTTP 130
            EKI+L  Q+ H  R+Q+D Q TK L PVH SHI A +QVCPN L+   L  LDLCD TTP
Sbjct: 1203 EKIILIGQQHHYRRSQNDNQETKQLAPVHGSHIFALTQVCPNNLNGGPLTPLDLCDATTP 1262

Query: 129  SSDHAPRGYYGSHTSGLPISNQGPTPPVHPTSGANSMLQGSA 4
            SSD    GY GSH SGL ISNQG    + P SGANS LQGS+
Sbjct: 1263 SSDIMSLGYQGSHNSGLAISNQGSVASMLPASGANSPLQGSS 1304


>ref|XP_003551409.1| PREDICTED: uncharacterized protein LOC100819248 [Glycine max]
          Length = 1953

 Score =  138 bits (347), Expect = 5e-31
 Identities = 78/161 (48%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
 Frame = -3

Query: 483  KERHKILMNWNXXXXXXXXXXXXXXXSYLSTLPGILKAVPDNCFNVCK-PMEEDTLKFHF 307
            KERHKILM+                 SY STLPGI K      F   + PMEEDTLK HF
Sbjct: 1134 KERHKILMDRTAGDGADSAEDSGSSQSYPSTLPGIPKGSARQLFQRLQGPMEEDTLKSHF 1193

Query: 306  EKIVLSVQKQHPYRTQSDKQGTKLVPVHNSHIVAFSQVCPNTLS*VILMSLDLCDTTTPS 127
            +KI+   QKQ  +R Q+D Q   LVPVHNSH+ A SQ+CPN L+  +L  LDLCDT   S
Sbjct: 1194 DKIIKIGQKQRYHRNQNDNQ--PLVPVHNSHVFALSQICPNNLNGSVLTPLDLCDTNQTS 1251

Query: 126  SDHAPRGYYGSHTSGLPISNQGPTPPVHPTSGANSMLQGSA 4
             D    GY GSH  GLP+SN      VHP++G NS +  S+
Sbjct: 1252 PDVLSLGYQGSHAGGLPMSNHSSVSSVHPSAGLNSSISSSS 1292


>ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267035 [Vitis vinifera]
          Length = 2022

 Score =  137 bits (346), Expect = 7e-31
 Identities = 82/162 (50%), Positives = 94/162 (58%), Gaps = 2/162 (1%)
 Frame = -3

Query: 483  KERHKILMNWNXXXXXXXXXXXXXXXSYLSTLPGILKAVPDNCFNVCK-PMEEDTLKFHF 307
            KERHKILM+                  Y STLPGI K      F   + PM E+TLK HF
Sbjct: 1157 KERHKILMDRTAGDGADSAEDSGSSQPYPSTLPGIPKGSARQLFQHLQGPMLEETLKSHF 1216

Query: 306  EKIVLSVQKQHPYRTQSDKQGTK-LVPVHNSHIVAFSQVCPNTLS*VILMSLDLCDTTTP 130
            EKI+L  Q+ H  R+Q+D Q  K L PVH SH+ A +QVCPN L+   L  LDLCD T  
Sbjct: 1217 EKIILIGQQHHYRRSQNDNQEPKQLAPVHGSHVFALTQVCPNNLNGGPLTPLDLCDATAS 1276

Query: 129  SSDHAPRGYYGSHTSGLPISNQGPTPPVHPTSGANSMLQGSA 4
            SSD    GY GSH SGL ISNQG    + P SGANS LQGS+
Sbjct: 1277 SSDIMSLGYQGSHNSGLAISNQGSVASMLPASGANSPLQGSS 1318


>emb|CBI37340.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  137 bits (346), Expect = 7e-31
 Identities = 82/162 (50%), Positives = 94/162 (58%), Gaps = 2/162 (1%)
 Frame = -3

Query: 483  KERHKILMNWNXXXXXXXXXXXXXXXSYLSTLPGILKAVPDNCFNVCK-PMEEDTLKFHF 307
            KERHKILM+                  Y STLPGI K      F   + PM E+TLK HF
Sbjct: 1082 KERHKILMDRTAGDGADSAEDSGSSQPYPSTLPGIPKGSARQLFQHLQGPMLEETLKSHF 1141

Query: 306  EKIVLSVQKQHPYRTQSDKQGTK-LVPVHNSHIVAFSQVCPNTLS*VILMSLDLCDTTTP 130
            EKI+L  Q+ H  R+Q+D Q  K L PVH SH+ A +QVCPN L+   L  LDLCD T  
Sbjct: 1142 EKIILIGQQHHYRRSQNDNQEPKQLAPVHGSHVFALTQVCPNNLNGGPLTPLDLCDATAS 1201

Query: 129  SSDHAPRGYYGSHTSGLPISNQGPTPPVHPTSGANSMLQGSA 4
            SSD    GY GSH SGL ISNQG    + P SGANS LQGS+
Sbjct: 1202 SSDIMSLGYQGSHNSGLAISNQGSVASMLPASGANSPLQGSS 1243


>ref|XP_003530866.1| PREDICTED: uncharacterized protein LOC100779997 [Glycine max]
          Length = 1980

 Score =  132 bits (333), Expect = 2e-29
 Identities = 78/161 (48%), Positives = 92/161 (57%), Gaps = 1/161 (0%)
 Frame = -3

Query: 483  KERHKILMNWNXXXXXXXXXXXXXXXSYLSTLPGILKAVPDNCFNVCK-PMEEDTLKFHF 307
            KERHKILM+                 SY STLPGI K      F   + PMEEDTLK HF
Sbjct: 1141 KERHKILMDRTSGDGADSAEDSGSSQSYPSTLPGIPKGSARQLFQRLQGPMEEDTLKSHF 1200

Query: 306  EKIVLSVQKQHPYRTQSDKQGTKLVPVHNSHIVAFSQVCPNTLS*VILMSLDLCDTTTPS 127
            +KI+   QKQ  +R Q+D Q   LVPVHNSH +A SQ+CPN L+  +L  LDLCDT   S
Sbjct: 1201 DKIIKIGQKQRYHRNQNDNQ--PLVPVHNSHGIALSQICPNNLNGNVLTPLDLCDTNQTS 1258

Query: 126  SDHAPRGYYGSHTSGLPISNQGPTPPVHPTSGANSMLQGSA 4
             D    GY GS   GLP+SN      VHP++G NS L  S+
Sbjct: 1259 PDVLSLGYQGSLAGGLPMSNHSSVSSVHPSAGLNSSLPSSS 1299


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