BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029820
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276313.1| PREDICTED: transcription-repair-coupling fac...   103   2e-20
gb|AAN72199.1| putative helicase [Arabidopsis thaliana]               102   2e-20
ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis th...   102   2e-20
gb|AAK43897.1|AF370520_1 putative helicase [Arabidopsis thaliana]     102   2e-20
ref|NP_001078092.1| putative DEAD/DEAH box helicase [Arabidopsis...   102   2e-20

>ref|XP_002276313.1| PREDICTED: transcription-repair-coupling factor-like [Vitis
           vinifera]
          Length = 823

 Score =  103 bits (256), Expect = 2e-20
 Identities = 58/108 (53%), Positives = 69/108 (63%)
 Frame = +2

Query: 170 KRIESTSDDDITLLNERIRRDLSKREGASRNTLNSEEAEKYIXXXXXXXXXXXXXXXGDR 349
           +R+E  SDD IT+LNERIRR+ SKR+ +    ++SEEA+KYI               G+R
Sbjct: 67  ERMEPESDD-ITILNERIRREQSKRDVSRAPVVDSEEADKYIQLVKEQQRRGLQKLKGER 125

Query: 350 TXXXXXXXXXXTFSYKVDPYTLHSGDYVVHKKVGVGRFVGIKFDVSKD 493
                       FSYKVDPYTL SGDYVVHKKVG+GRFVGIK DV KD
Sbjct: 126 VGKENGQ-----FSYKVDPYTLRSGDYVVHKKVGIGRFVGIKLDVPKD 168


>gb|AAN72199.1| putative helicase [Arabidopsis thaliana]
          Length = 822

 Score =  102 bits (255), Expect = 2e-20
 Identities = 60/105 (57%), Positives = 65/105 (61%)
 Frame = +2

Query: 179 ESTSDDDITLLNERIRRDLSKREGASRNTLNSEEAEKYIXXXXXXXXXXXXXXXGDRTXX 358
           E    D I+LLNERIRRDL KRE A R  ++SEEAEKYI               G R   
Sbjct: 66  ELAESDSISLLNERIRRDLGKRETA-RPAMDSEEAEKYIHMVKEQQERGLQKLKGIRQGT 124

Query: 359 XXXXXXXXTFSYKVDPYTLHSGDYVVHKKVGVGRFVGIKFDVSKD 493
                    FSYKVDPY+L SGDYVVHKKVG+GRFVGIKFDV KD
Sbjct: 125 KAAGDG--AFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKD 167


>ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana]
           gi|332640233|gb|AEE73754.1| putative DEAD/DEAH box
           helicase [Arabidopsis thaliana]
          Length = 823

 Score =  102 bits (255), Expect = 2e-20
 Identities = 60/105 (57%), Positives = 65/105 (61%)
 Frame = +2

Query: 179 ESTSDDDITLLNERIRRDLSKREGASRNTLNSEEAEKYIXXXXXXXXXXXXXXXGDRTXX 358
           E    D I+LLNERIRRDL KRE A R  ++SEEAEKYI               G R   
Sbjct: 67  ELAESDSISLLNERIRRDLGKRETA-RPAMDSEEAEKYIHMVKEQQERGLQKLKGIRQGT 125

Query: 359 XXXXXXXXTFSYKVDPYTLHSGDYVVHKKVGVGRFVGIKFDVSKD 493
                    FSYKVDPY+L SGDYVVHKKVG+GRFVGIKFDV KD
Sbjct: 126 KAAGDG--AFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKD 168


>gb|AAK43897.1|AF370520_1 putative helicase [Arabidopsis thaliana]
          Length = 823

 Score =  102 bits (255), Expect = 2e-20
 Identities = 60/105 (57%), Positives = 65/105 (61%)
 Frame = +2

Query: 179 ESTSDDDITLLNERIRRDLSKREGASRNTLNSEEAEKYIXXXXXXXXXXXXXXXGDRTXX 358
           E    D I+LLNERIRRDL KRE A R  ++SEEAEKYI               G R   
Sbjct: 67  ELAESDSISLLNERIRRDLGKRETA-RPAMDSEEAEKYIHMVKEQQERGLQKLKGIRQGT 125

Query: 359 XXXXXXXXTFSYKVDPYTLHSGDYVVHKKVGVGRFVGIKFDVSKD 493
                    FSYKVDPY+L SGDYVVHKKVG+GRFVGIKFDV KD
Sbjct: 126 KAAGDG--AFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKD 168


>ref|NP_001078092.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana]
           gi|6513947|gb|AAF14851.1|AC011664_33 putative helicase
           [Arabidopsis thaliana] gi|332640234|gb|AEE73755.1|
           putative DEAD/DEAH box helicase [Arabidopsis thaliana]
          Length = 822

 Score =  102 bits (255), Expect = 2e-20
 Identities = 60/105 (57%), Positives = 65/105 (61%)
 Frame = +2

Query: 179 ESTSDDDITLLNERIRRDLSKREGASRNTLNSEEAEKYIXXXXXXXXXXXXXXXGDRTXX 358
           E    D I+LLNERIRRDL KRE A R  ++SEEAEKYI               G R   
Sbjct: 66  ELAESDSISLLNERIRRDLGKRETA-RPAMDSEEAEKYIHMVKEQQERGLQKLKGIRQGT 124

Query: 359 XXXXXXXXTFSYKVDPYTLHSGDYVVHKKVGVGRFVGIKFDVSKD 493
                    FSYKVDPY+L SGDYVVHKKVG+GRFVGIKFDV KD
Sbjct: 125 KAAGDG--AFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKD 167