BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029818
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein C...   281   7e-74
ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein C...   267   1e-69
ref|XP_004137133.1| PREDICTED: cytochrome c biogenesis protein C...   267   1e-69
ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein C...   266   3e-69
ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|2...   264   9e-69

>ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic
           [Vitis vinifera] gi|297741415|emb|CBI32546.3| unnamed
           protein product [Vitis vinifera]
          Length = 557

 Score =  281 bits (719), Expect = 7e-74
 Identities = 136/166 (81%), Positives = 153/166 (92%)
 Frame = -1

Query: 637 PFNLAMAPLKVNGDKKLYGTFLPVGDGDTSNVKGISMLARDLQSIVLYDQEGKFVGVRRP 458
           PFNLAMAPLK+NGDKKL+GTFLPVGD D+ NVKGISMLARDLQSIVLYD+EGKF GVRRP
Sbjct: 392 PFNLAMAPLKLNGDKKLFGTFLPVGDSDSPNVKGISMLARDLQSIVLYDKEGKFAGVRRP 451

Query: 457 DSNLPVDIGGTKIVIVDAIGSSGLDLKIDPGVPIVYAGFGALMLTTCISYLSHSQVWALQ 278
           +SNLP+DI GT+IVI DAIGSSGLDLK DPGVPIVYAGFGALMLTTCISYLSH+Q+WALQ
Sbjct: 452 NSNLPIDIDGTRIVIEDAIGSSGLDLKTDPGVPIVYAGFGALMLTTCISYLSHTQIWALQ 511

Query: 277 DGTTVVIGGKTNRAKIEFPNEMNRLLDLVPEIINSSPPETSEILDG 140
           DGTTVVIGGKTNRAK+EFP+EMN+LLD VPE++ SS  + S+ + G
Sbjct: 512 DGTTVVIGGKTNRAKLEFPDEMNQLLDRVPELVESSLSKQSDAISG 557


>ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Cucumis sativus]
          Length = 560

 Score =  267 bits (682), Expect = 1e-69
 Identities = 129/156 (82%), Positives = 143/156 (91%)
 Frame = -1

Query: 637 PFNLAMAPLKVNGDKKLYGTFLPVGDGDTSNVKGISMLARDLQSIVLYDQEGKFVGVRRP 458
           PFNLA+APLK+NGDKKLYGTFLPVGD ++ +VKGISMLARDLQSIVLYDQEGKFVGVRRP
Sbjct: 396 PFNLAVAPLKINGDKKLYGTFLPVGDVNSPDVKGISMLARDLQSIVLYDQEGKFVGVRRP 455

Query: 457 DSNLPVDIGGTKIVIVDAIGSSGLDLKIDPGVPIVYAGFGALMLTTCISYLSHSQVWALQ 278
            S LP+DI G KI IVDAIGS+GL+LK DPGVPIVYAGFGALMLTTC+SYLSHSQVWA+Q
Sbjct: 456 SSRLPIDINGIKIEIVDAIGSTGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQVWAIQ 515

Query: 277 DGTTVVIGGKTNRAKIEFPNEMNRLLDLVPEIINSS 170
           DGT V++GGKTNRAK+EFP EM+RLLD VPEII  S
Sbjct: 516 DGTVVIVGGKTNRAKVEFPEEMDRLLDKVPEIIEPS 551


>ref|XP_004137133.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Cucumis sativus]
          Length = 557

 Score =  267 bits (682), Expect = 1e-69
 Identities = 129/156 (82%), Positives = 143/156 (91%)
 Frame = -1

Query: 637 PFNLAMAPLKVNGDKKLYGTFLPVGDGDTSNVKGISMLARDLQSIVLYDQEGKFVGVRRP 458
           PFNLA+APLK+NGDKKLYGTFLPVGD ++ +VKGISMLARDLQSIVLYDQEGKFVGVRRP
Sbjct: 393 PFNLAVAPLKINGDKKLYGTFLPVGDVNSPDVKGISMLARDLQSIVLYDQEGKFVGVRRP 452

Query: 457 DSNLPVDIGGTKIVIVDAIGSSGLDLKIDPGVPIVYAGFGALMLTTCISYLSHSQVWALQ 278
            S LP+DI G KI IVDAIGS+GL+LK DPGVPIVYAGFGALMLTTC+SYLSHSQVWA+Q
Sbjct: 453 SSRLPIDINGIKIEIVDAIGSTGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQVWAIQ 512

Query: 277 DGTTVVIGGKTNRAKIEFPNEMNRLLDLVPEIINSS 170
           DGT V++GGKTNRAK+EFP EM+RLLD VPEII  S
Sbjct: 513 DGTVVIVGGKTNRAKVEFPEEMDRLLDKVPEIIEPS 548


>ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Glycine max]
          Length = 563

 Score =  266 bits (679), Expect = 3e-69
 Identities = 126/166 (75%), Positives = 152/166 (91%)
 Frame = -1

Query: 637 PFNLAMAPLKVNGDKKLYGTFLPVGDGDTSNVKGISMLARDLQSIVLYDQEGKFVGVRRP 458
           P+NLAMAPL++NGDKKL+GTFLPVGD ++ +VKGISMLARDLQSIVLYD+EGKF GVRRP
Sbjct: 398 PYNLAMAPLQINGDKKLFGTFLPVGDINSPDVKGISMLARDLQSIVLYDKEGKFAGVRRP 457

Query: 457 DSNLPVDIGGTKIVIVDAIGSSGLDLKIDPGVPIVYAGFGALMLTTCISYLSHSQVWALQ 278
           +S LP++I G++IVIVDAIGSSGL+LK DPGVP+VYAGFGALM+TTCISYLSHSQ+WALQ
Sbjct: 458 NSKLPINIDGSEIVIVDAIGSSGLELKTDPGVPVVYAGFGALMITTCISYLSHSQIWALQ 517

Query: 277 DGTTVVIGGKTNRAKIEFPNEMNRLLDLVPEIINSSPPETSEILDG 140
           DGTTV +GGKTNRAK+EFP EM+RLLD VPEI+ S+ P+ ++ + G
Sbjct: 518 DGTTVFVGGKTNRAKMEFPEEMSRLLDKVPEIVESNLPKHADSISG 563


>ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|222849474|gb|EEE87021.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  264 bits (675), Expect = 9e-69
 Identities = 128/166 (77%), Positives = 146/166 (87%)
 Frame = -1

Query: 637 PFNLAMAPLKVNGDKKLYGTFLPVGDGDTSNVKGISMLARDLQSIVLYDQEGKFVGVRRP 458
           PFNLAMAPLK++GD KLYGTFLPVGD ++ NVKGISMLARDLQSIVLYDQEGKFVGVRRP
Sbjct: 267 PFNLAMAPLKISGDNKLYGTFLPVGDVNSPNVKGISMLARDLQSIVLYDQEGKFVGVRRP 326

Query: 457 DSNLPVDIGGTKIVIVDAIGSSGLDLKIDPGVPIVYAGFGALMLTTCISYLSHSQVWALQ 278
           +S LP+DI G KI+I DAIGSSGL+LK DPGVP+VYAGFGALMLTTC+SYLSHSQ+WALQ
Sbjct: 327 NSKLPIDIDGMKIIIEDAIGSSGLELKTDPGVPVVYAGFGALMLTTCLSYLSHSQIWALQ 386

Query: 277 DGTTVVIGGKTNRAKIEFPNEMNRLLDLVPEIINSSPPETSEILDG 140
           DGT V++GGKTNRAK EF  E+N LLD VPEI+ SS  + S++  G
Sbjct: 387 DGTAVIVGGKTNRAKAEFQYEINFLLDKVPEIVESSLSKQSDVASG 432