BLASTX nr result
ID: Coptis23_contig00029817
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00029817
(422 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004165243.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor... 110 1e-30
ref|XP_004151184.1| PREDICTED: ABC transporter G family member 3... 110 1e-30
gb|ACU82514.1| pleiotropic drug resistance protein [Cucumis sati... 110 4e-30
ref|XP_002303308.1| predicted protein [Populus trichocarpa] gi|2... 102 1e-29
ref|XP_004158295.1| PREDICTED: pleiotropic drug resistance prote... 114 2e-29
>ref|XP_004165243.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member
36-like [Cucumis sativus]
Length = 1475
Score = 110 bits (275), Expect(3) = 1e-30
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -1
Query: 317 VWMVVMYYSIGFPPEASRFFKQFLLMILFQQMAAGFFNFTVGVCRTHNISSTFGSXXXXX 138
VW+VV YY+IGF PEASRFFKQ LL+ L QQMAAG F G+CR+ I++T GS
Sbjct: 633 VWLVVTYYTIGFAPEASRFFKQLLLIFLVQQMAAGVFRLIAGICRSMIIANTGGSLILLL 692
Query: 137 XXXLGGFTIPRDMIPKWWIWGYSC*PSSY 51
LGGF IPR IPKWWIWGY P +Y
Sbjct: 693 IFLLGGFIIPRGEIPKWWIWGYWISPLTY 721
Score = 37.7 bits (86), Expect(3) = 1e-30
Identities = 13/35 (37%), Positives = 27/35 (77%)
Frame = -2
Query: 421 HSQNEDDTTLYVGALTYTLVANMYNSIPEQSITIS 317
H++++ D +++GAL ++L++NM+N E ++TIS
Sbjct: 562 HTRDQSDGAVFIGALLFSLISNMFNGFSELAMTIS 596
Score = 30.0 bits (66), Expect(3) = 1e-30
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -3
Query: 48 YNAISVNEFFAPRW 7
+NAI+VNE FAPRW
Sbjct: 723 FNAIAVNEMFAPRW 736
>ref|XP_004151184.1| PREDICTED: ABC transporter G family member 36-like [Cucumis
sativus]
Length = 1475
Score = 110 bits (275), Expect(3) = 1e-30
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -1
Query: 317 VWMVVMYYSIGFPPEASRFFKQFLLMILFQQMAAGFFNFTVGVCRTHNISSTFGSXXXXX 138
VW+VV YY+IGF PEASRFFKQ LL+ L QQMAAG F G+CR+ I++T GS
Sbjct: 633 VWLVVTYYTIGFAPEASRFFKQLLLIFLVQQMAAGVFRLIAGICRSMIIANTGGSLILLL 692
Query: 137 XXXLGGFTIPRDMIPKWWIWGYSC*PSSY 51
LGGF IPR IPKWWIWGY P +Y
Sbjct: 693 IFLLGGFIIPRGEIPKWWIWGYWISPLTY 721
Score = 37.7 bits (86), Expect(3) = 1e-30
Identities = 13/35 (37%), Positives = 27/35 (77%)
Frame = -2
Query: 421 HSQNEDDTTLYVGALTYTLVANMYNSIPEQSITIS 317
H++++ D +++GAL ++L++NM+N E ++TIS
Sbjct: 562 HTRDQSDGAVFIGALLFSLISNMFNGFSELAMTIS 596
Score = 30.0 bits (66), Expect(3) = 1e-30
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -3
Query: 48 YNAISVNEFFAPRW 7
+NAI+VNE FAPRW
Sbjct: 723 FNAIAVNEMFAPRW 736
>gb|ACU82514.1| pleiotropic drug resistance protein [Cucumis sativus]
Length = 1475
Score = 110 bits (275), Expect(3) = 4e-30
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -1
Query: 317 VWMVVMYYSIGFPPEASRFFKQFLLMILFQQMAAGFFNFTVGVCRTHNISSTFGSXXXXX 138
VW+VV YY+IGF PEASRFFKQ LL+ L QQMAAG F G+CR+ I++T GS
Sbjct: 633 VWLVVTYYTIGFAPEASRFFKQLLLIFLVQQMAAGVFRLIAGICRSMIIANTGGSLILLL 692
Query: 137 XXXLGGFTIPRDMIPKWWIWGYSC*PSSY 51
LGGF IPR IPKWWIWGY P +Y
Sbjct: 693 IFLLGGFIIPRGEIPKWWIWGYWISPLTY 721
Score = 36.2 bits (82), Expect(3) = 4e-30
Identities = 13/35 (37%), Positives = 26/35 (74%)
Frame = -2
Query: 421 HSQNEDDTTLYVGALTYTLVANMYNSIPEQSITIS 317
H++++ D +++GAL ++L++NM N E ++TIS
Sbjct: 562 HTRDQSDGAVFIGALLFSLISNMLNGFSELAMTIS 596
Score = 30.0 bits (66), Expect(3) = 4e-30
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -3
Query: 48 YNAISVNEFFAPRW 7
+NAI+VNE FAPRW
Sbjct: 723 FNAIAVNEMFAPRW 736
>ref|XP_002303308.1| predicted protein [Populus trichocarpa] gi|222840740|gb|EEE78287.1|
predicted protein [Populus trichocarpa]
Length = 1448
Score = 102 bits (254), Expect(3) = 1e-29
Identities = 48/89 (53%), Positives = 57/89 (64%)
Frame = -1
Query: 317 VWMVVMYYSIGFPPEASRFFKQFLLMILFQQMAAGFFNFTVGVCRTHNISSTFGSXXXXX 138
VW+ + YYSIGF PEA+RFFKQ LL+ QQMAAG F GVCRT I++T G+
Sbjct: 642 VWVSITYYSIGFAPEANRFFKQLLLVFFIQQMAAGLFRLIAGVCRTMIIANTGGALTLLL 701
Query: 137 XXXLGGFTIPRDMIPKWWIWGYSC*PSSY 51
LGGF +P+ IP WW WGY P SY
Sbjct: 702 VFLLGGFILPKGTIPNWWEWGYWVSPLSY 730
Score = 38.5 bits (88), Expect(3) = 1e-29
Identities = 13/34 (38%), Positives = 25/34 (73%)
Frame = -2
Query: 421 HSQNEDDTTLYVGALTYTLVANMYNSIPEQSITI 320
H++NE+D +Y+GAL +T++ N++N E ++ I
Sbjct: 571 HTRNEEDGAVYIGALLFTIIINIFNGFAELTLVI 604
Score = 33.9 bits (76), Expect(3) = 1e-29
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -3
Query: 48 YNAISVNEFFAPRWMD 1
YNAI+VNE FAPRWM+
Sbjct: 732 YNAIAVNEMFAPRWMN 747
>ref|XP_004158295.1| PREDICTED: pleiotropic drug resistance protein 12-like [Cucumis
sativus]
Length = 1484
Score = 114 bits (285), Expect(2) = 2e-29
Identities = 56/105 (53%), Positives = 69/105 (65%)
Frame = -1
Query: 317 VWMVVMYYSIGFPPEASRFFKQFLLMILFQQMAAGFFNFTVGVCRTHNISSTFGSXXXXX 138
VWMV+ YY+IGF PEASRFFKQFLL+ L QQMA+G F F G CRT I++T GS
Sbjct: 633 VWMVMTYYTIGFAPEASRFFKQFLLVFLIQQMASGLFRFIAGCCRTMIIANTGGSLTLLI 692
Query: 137 XXXLGGFTIPRDMIPKWWIWGYSC*PSSYTTMLSLSTNFLLLGGW 3
LGGFT+P+ IPKWW WGY P +Y + ++S N + W
Sbjct: 693 VFMLGGFTLPKGDIPKWWTWGYWISPMTY-SYNAISVNEMFAPRW 736
Score = 39.7 bits (91), Expect(2) = 2e-29
Identities = 14/35 (40%), Positives = 26/35 (74%)
Frame = -2
Query: 421 HSQNEDDTTLYVGALTYTLVANMYNSIPEQSITIS 317
H +NE+D +Y+GAL +T++ NM+N + ++TI+
Sbjct: 562 HHRNEEDGAIYIGALIFTMMVNMFNGYADIALTIA 596