BLASTX nr result

ID: Coptis23_contig00029815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029815
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV30814.1| NBS-containing resistance-like protein [Platanus ...   108   5e-22
gb|ABV30815.1| NBS-containing resistance-like protein [Platanus ...   107   8e-22
gb|AFC90752.1| nucleotide-binding site leucine-rich repeat prote...   102   2e-20
gb|AFC90586.1| nucleotide-binding site leucine-rich repeat prote...   102   2e-20
gb|AFC90775.1| nucleotide-binding site leucine-rich repeat prote...   102   4e-20

>gb|ABV30814.1| NBS-containing resistance-like protein [Platanus x acerifolia]
          Length = 157

 Score =  108 bits (270), Expect = 5e-22
 Identities = 54/120 (45%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
 Frame = +3

Query: 114 HQR*ACETVAFDRIIWVTVSKVSCLDDVQNEIAKQLKVSLPVYVDEVHQAS-LLGDMLKK 290
           H R       FD IIW+TVSK S L+ +QN+I K+L +      D++ +AS LL  + ++
Sbjct: 7   HNRLLKGGTGFDHIIWITVSKESYLEKLQNDIGKKLDLDFRDDEDKLSRASKLLVALERR 66

Query: 291 VKYLIILDDVWEPIPLEKVGVPQPTMENGCKVVLTTRSEKVCHCMSTDKNIHIGGLSDEE 470
            ++++ILDD+WE  PLE VG+P PT ENGCK++LTTR + VC  M T++N+ +  LS +E
Sbjct: 67  KRFILILDDMWEAFPLENVGIPNPTRENGCKLLLTTRLKGVCRGMETERNVEVRVLSKDE 126


>gb|ABV30815.1| NBS-containing resistance-like protein [Platanus x acerifolia]
          Length = 157

 Score =  107 bits (268), Expect = 8e-22
 Identities = 55/120 (45%), Positives = 77/120 (64%), Gaps = 1/120 (0%)
 Frame = +3

Query: 114 HQR*ACETVAFDRIIWVTVSKVSCLDDVQNEIAKQLKVSLPVYVDEVHQAS-LLGDMLKK 290
           H R       FD IIW+TVSK S L+ +QN+I K+L +      D++ +AS LL  + ++
Sbjct: 7   HNRLLKGGTGFDHIIWITVSKESYLEKLQNDIGKKLDLDFRDDEDKLSRASKLLVALERR 66

Query: 291 VKYLIILDDVWEPIPLEKVGVPQPTMENGCKVVLTTRSEKVCHCMSTDKNIHIGGLSDEE 470
            +++IILDD+WE  PLE VG+P PT ENGCK++LTTR   VC  M T  N+ +  LS +E
Sbjct: 67  KRFIIILDDMWEAFPLENVGIPNPTRENGCKLLLTTRLRGVCRVMETQTNVKVSVLSRDE 126


>gb|AFC90752.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score =  102 bits (255), Expect = 2e-20
 Identities = 55/120 (45%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
 Frame = +3

Query: 114 HQR*ACETVAFDRIIWVTVSKVSCLDDVQNEIAKQLKVSLPVYVDEVHQASLLGDML-KK 290
           H +   ET  FD + WVTVSK   + ++Q EIAK+LKV +    D + +A  L  +L ++
Sbjct: 9   HNKLLEETDEFDSVFWVTVSKAFNVRELQREIAKELKVCISDDEDVIRRAKELHAVLSRR 68

Query: 291 VKYLIILDDVWEPIPLEKVGVPQPTMENGCKVVLTTRSEKVCHCMSTDKNIHIGGLSDEE 470
            +Y++ILDD+WE  PLEKVG+P+PT  NGCK+VLTTRS +VC  M     + +  L++EE
Sbjct: 69  ERYVLILDDLWEAFPLEKVGIPEPTRSNGCKLVLTTRSFEVCRRMRCTP-VRVELLTEEE 127


>gb|AFC90586.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score =  102 bits (255), Expect = 2e-20
 Identities = 55/120 (45%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
 Frame = +3

Query: 114 HQR*ACETVAFDRIIWVTVSKVSCLDDVQNEIAKQLKVSLPVYVDEVHQASLLGDML-KK 290
           H +   ET  FD + WVTVSK   + ++Q EIAK+LKV +    D + +A  L  +L ++
Sbjct: 9   HNKLLEETDEFDSVFWVTVSKAFNVRELQREIAKELKVCISDDEDVIRRAKELHAVLSRR 68

Query: 291 VKYLIILDDVWEPIPLEKVGVPQPTMENGCKVVLTTRSEKVCHCMSTDKNIHIGGLSDEE 470
            +Y++ILDD+WE  PLEKVG+P+PT  NGCK+VLTTRS +VC  M     + +  L++EE
Sbjct: 69  ERYVLILDDLWEAFPLEKVGIPEPTRSNGCKLVLTTRSFEVCRRMRCTP-VRVELLTEEE 127


>gb|AFC90775.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/120 (45%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
 Frame = +3

Query: 114 HQR*ACETVAFDRIIWVTVSKVSCLDDVQNEIAKQLKVSLPVYVDEVHQASLLGDML-KK 290
           H +   ET  FD + WVTVSK   + ++Q EIAK+L VS+    D   +A+ L  +L ++
Sbjct: 9   HNKLLKETAKFDSVFWVTVSKAFNVRELQREIAKELNVSISDDEDVTRRAAELCTVLSRR 68

Query: 291 VKYLIILDDVWEPIPLEKVGVPQPTMENGCKVVLTTRSEKVCHCMSTDKNIHIGGLSDEE 470
            +Y++ILDD+WE  PLE VG+P+PT  NGCK+VLTTRS +VC  M    ++ +  L++EE
Sbjct: 69  ERYVLILDDLWEAFPLETVGIPEPTKPNGCKLVLTTRSFEVCRRMGC-TSVQVELLTEEE 127


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