BLASTX nr result

ID: Coptis23_contig00029747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029747
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38024.1| unknown [Lotus japonicus]                               62   4e-08
ref|NP_564380.1| uncharacterized protein [Arabidopsis thaliana] ...    62   6e-08
ref|XP_002326779.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|NP_173741.1| uncharacterized protein [Arabidopsis thaliana] ...    58   9e-07
ref|XP_003612557.1| hypothetical protein MTR_5g026390 [Medicago ...    58   9e-07

>gb|AFK38024.1| unknown [Lotus japonicus]
          Length = 251

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 40/108 (37%), Positives = 61/108 (56%)
 Frame = +3

Query: 21  VEEIIAQAMDQHMLEQVSSINLSGVIDDHTDSTLPTSLETRFRKLKSFPGPNPKTTPSLN 200
           + EII+QA D  +L+Q+++IN +GV    TDS LP  L++RFRKLKS P  N  T P+ N
Sbjct: 15  INEIISQAQDACLLDQLAAINCAGV----TDSVLPPDLDSRFRKLKSLPA-NRTTPPTFN 69

Query: 201 SQLQDLPITPNALKSIPISPSGEKTSPQPEFSSSKIDPVCEPKSRSRR 344
           ++ +      + L S  ++ +   +   P FS  K DP  EP   + +
Sbjct: 70  AKARSF----STLSSRTLNKTVMGSDQSPNFSPPKNDP--EPDEHTEK 111


>ref|NP_564380.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12322544|gb|AAG51273.1|AC027135_14 unknown protein
           [Arabidopsis thaliana] gi|26450690|dbj|BAC42454.1|
           unknown protein [Arabidopsis thaliana]
           gi|28950867|gb|AAO63357.1| At1g31460 [Arabidopsis
           thaliana] gi|332193237|gb|AEE31358.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 301

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 44/111 (39%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
 Frame = +3

Query: 21  VEEIIAQAMDQHMLEQVSSINLSGVIDDHTDSTLPTSLETRFRKLKSFP-GPNPKTTPSL 197
           VEE+I+QA +   LEQV++IN SG     TDSTLP  LE+RFR+LKS P  P  +   S 
Sbjct: 15  VEELISQAKELSDLEQVAAINCSGF----TDSTLPDDLESRFRRLKSLPAAPRHEPVSSS 70

Query: 198 NSQLQDLPITPNALKSIPISPSGEKTSPQPEFSS-SKIDPVCEPKSRSRRN 347
           +S  +  P++ +  KS+ ++ SG + +P  +  S S  D      SR +R+
Sbjct: 71  SSMNRQKPLSHS--KSVNVNFSGNRRNPGKKTGSVSLSDEDSSNLSRKKRD 119


>ref|XP_002326779.1| predicted protein [Populus trichocarpa] gi|222834101|gb|EEE72578.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/63 (52%), Positives = 40/63 (63%)
 Frame = +3

Query: 21  VEEIIAQAMDQHMLEQVSSINLSGVIDDHTDSTLPTSLETRFRKLKSFPGPNPKTTPSLN 200
           V+E+++Q  +  +LEQVS IN SG     TDS LP  LETRF KLKSFP P    TP+ N
Sbjct: 15  VDELVSQTQELCVLEQVSKINCSGF----TDSVLPADLETRFHKLKSFP-PTKSKTPTTN 69

Query: 201 SQL 209
             L
Sbjct: 70  KSL 72


>ref|NP_173741.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9295712|gb|AAF87018.1|AC005292_27 F26F24.11
           [Arabidopsis thaliana] gi|332192245|gb|AEE30366.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 180

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/77 (45%), Positives = 49/77 (63%)
 Frame = +3

Query: 21  VEEIIAQAMDQHMLEQVSSINLSGVIDDHTDSTLPTSLETRFRKLKSFPGPNPKTTPSLN 200
           VEE+++QA DQ++LEQV+ IN SG  D   D+ LPT+ ETR R+LKS P      T S++
Sbjct: 13  VEELLSQAKDQYVLEQVAKINCSGFTD---DTALPTNPETRLRRLKSLP---VSRTDSVS 66

Query: 201 SQLQDLPITPNALKSIP 251
           S  + L    N++ S P
Sbjct: 67  SSPKKLLSHSNSMASHP 83


>ref|XP_003612557.1| hypothetical protein MTR_5g026390 [Medicago truncatula]
           gi|355513892|gb|AES95515.1| hypothetical protein
           MTR_5g026390 [Medicago truncatula]
          Length = 290

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
 Frame = +3

Query: 21  VEEIIAQAMDQHMLEQVSSINLSGVIDDHTDSTLPTSLETRFRKLKSFPGPNPKTTPSLN 200
           + EII+QA D  +L+Q+S+IN S      T S LP +LE+RF KLKSFP  +    P L+
Sbjct: 17  ISEIISQAKDSILLQQISAINCSSF----THSDLPPNLESRFNKLKSFPANHTPPPPYLS 72

Query: 201 -SQLQDLPITPNALKSIPISPSGEKTSPQPEFSSSKI 308
            +     P  PN+      SPS   T   P  SS+KI
Sbjct: 73  KNPTFSTPKNPNSDSQSVSSPSKHATFSNP--SSTKI 107


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