BLASTX nr result

ID: Coptis23_contig00029726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029726
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157814.1| PREDICTED: LOW QUALITY PROTEIN: lysine-speci...   132   3e-29
ref|XP_004152585.1| PREDICTED: lysine-specific demethylase REF6-...   132   3e-29
ref|XP_002275305.1| PREDICTED: lysine-specific demethylase REF6-...   127   7e-28
ref|XP_002511265.1| nucleic acid binding protein, putative [Rici...   127   7e-28
ref|XP_002318103.1| jumonji domain protein [Populus trichocarpa]...   124   8e-27

>ref|XP_004157814.1| PREDICTED: LOW QUALITY PROTEIN: lysine-specific demethylase
           REF6-like [Cucumis sativus]
          Length = 1576

 Score =  132 bits (332), Expect = 3e-29
 Identities = 64/98 (65%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
 Frame = -2

Query: 291 EPVHEIPQWLKSLPVAPEYHPTVAEFQDPIAYILKIENEASQFGICKIVPPVPLPSKKAT 112
           EP  E+  WLK+LP+APEYHPT+AEFQDPI+YI KIE EAS+FGICKIVPPVP   KK  
Sbjct: 9   EPTQEVLSWLKTLPLAPEYHPTLAEFQDPISYIFKIEKEASKFGICKIVPPVPPSPKKTV 68

Query: 111 ITNLNRSLSAR-XXXXXXXXNKSPPTFTTRHQQVGFDP 1
           I N N+SL+AR         +KSPPTFTTR QQ+GF P
Sbjct: 69  IVNFNKSLAARAAPCSDSTNSKSPPTFTTRQQQIGFCP 106


>ref|XP_004152585.1| PREDICTED: lysine-specific demethylase REF6-like [Cucumis sativus]
          Length = 1576

 Score =  132 bits (332), Expect = 3e-29
 Identities = 64/98 (65%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
 Frame = -2

Query: 291 EPVHEIPQWLKSLPVAPEYHPTVAEFQDPIAYILKIENEASQFGICKIVPPVPLPSKKAT 112
           EP  E+  WLK+LP+APEYHPT+AEFQDPI+YI KIE EAS+FGICKIVPPVP   KK  
Sbjct: 9   EPTQEVLSWLKTLPLAPEYHPTLAEFQDPISYIFKIEKEASKFGICKIVPPVPPSPKKTV 68

Query: 111 ITNLNRSLSAR-XXXXXXXXNKSPPTFTTRHQQVGFDP 1
           I N N+SL+AR         +KSPPTFTTR QQ+GF P
Sbjct: 69  IVNFNKSLAARAAPCSDSTNSKSPPTFTTRQQQIGFCP 106


>ref|XP_002275305.1| PREDICTED: lysine-specific demethylase REF6-like [Vitis vinifera]
          Length = 1295

 Score =  127 bits (320), Expect = 7e-28
 Identities = 64/97 (65%), Positives = 72/97 (74%)
 Frame = -2

Query: 291 EPVHEIPQWLKSLPVAPEYHPTVAEFQDPIAYILKIENEASQFGICKIVPPVPLPSKKAT 112
           EP  E+  WLK+LP+APEYHPT+AEFQDPI+YI KIE EAS++GICKIVPPVP P KK  
Sbjct: 9   EPNPEVFSWLKTLPLAPEYHPTLAEFQDPISYIFKIEKEASRYGICKIVPPVPPPPKKTA 68

Query: 111 ITNLNRSLSARXXXXXXXXNKSPPTFTTRHQQVGFDP 1
           I NL RSL+ R         KS PTFTTR QQVGF P
Sbjct: 69  IANLTRSLANR---AASSNPKSAPTFTTRQQQVGFCP 102


>ref|XP_002511265.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223550380|gb|EEF51867.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 1736

 Score =  127 bits (320), Expect = 7e-28
 Identities = 64/93 (68%), Positives = 73/93 (78%)
 Frame = -2

Query: 279 EIPQWLKSLPVAPEYHPTVAEFQDPIAYILKIENEASQFGICKIVPPVPLPSKKATITNL 100
           E+ QWLK+LP+APEYHPT+AEFQDPIAYI KIE EAS++GICKIVPPV    KKA I NL
Sbjct: 19  EVFQWLKNLPLAPEYHPTLAEFQDPIAYIFKIEKEASKYGICKIVPPVLAAPKKAAIANL 78

Query: 99  NRSLSARXXXXXXXXNKSPPTFTTRHQQVGFDP 1
           NRSL+AR        +KS PTFTTR QQ+GF P
Sbjct: 79  NRSLAAR-----SSSSKSAPTFTTRQQQIGFCP 106


>ref|XP_002318103.1| jumonji domain protein [Populus trichocarpa]
           gi|222858776|gb|EEE96323.1| jumonji domain protein
           [Populus trichocarpa]
          Length = 156

 Score =  124 bits (311), Expect = 8e-27
 Identities = 62/93 (66%), Positives = 72/93 (77%)
 Frame = -2

Query: 279 EIPQWLKSLPVAPEYHPTVAEFQDPIAYILKIENEASQFGICKIVPPVPLPSKKATITNL 100
           E+ QWLK+LP+APEY PT AEFQDPIAYI KIE EASQ+GICKI+PPV   +KK T++NL
Sbjct: 19  EVCQWLKNLPLAPEYRPTQAEFQDPIAYIFKIEKEASQYGICKIIPPVLPSAKKTTLSNL 78

Query: 99  NRSLSARXXXXXXXXNKSPPTFTTRHQQVGFDP 1
           NRSLSAR        + S PTFTTR QQ+GF P
Sbjct: 79  NRSLSAR------NGDSSAPTFTTRQQQIGFCP 105


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