BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029725
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24816.1| unknown [Picea sitchensis]                              49   9e-10
ref|XP_003621009.1| High mobility group family [Medicago truncat...    52   3e-09
gb|ADN34129.1| high mobility group family [Cucumis melo subsp. m...    44   3e-08
ref|XP_004145526.1| PREDICTED: high mobility group B protein 9-l...    44   4e-08
ref|NP_171980.1| high mobility group-box and ARID domain-binding...    46   1e-07

>gb|ABK24816.1| unknown [Picea sitchensis]
          Length = 481

 Score = 49.3 bits (116), Expect(2) = 9e-10
 Identities = 28/51 (54%), Positives = 33/51 (64%)
 Frame = +2

Query: 263 SLLVKKKLFLLIPESEYMNKTMTGIIDGKFEFDYLATVNVGSETLKGVLYE 415
           SLL K+K    +     M   +TG+IDGKFE  YL TV VGSE L+GVLYE
Sbjct: 197 SLLKKRKR---VDPMSSMGHPVTGVIDGKFENAYLITVMVGSEKLRGVLYE 244



 Score = 38.5 bits (88), Expect(2) = 9e-10
 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
 Frame = +1

Query: 64  EWTHFSREYNEVPPTKPDDPNELRNHYNEILYDYEQVYF---HGRSSPPLSQAPQVEP-D 231
           +W   +  +N  PPT  +    LR +Y  +LY YEQVYF    G+  PP +  P   P  
Sbjct: 121 KWKDITAIFN-FPPTATNASFVLRKYYISLLYHYEQVYFFGAQGQPIPPPAALPAPSPVS 179

Query: 232 LSKPLSDLELQP 267
            SK +++L   P
Sbjct: 180 HSKNINELANPP 191


>ref|XP_003621009.1| High mobility group family [Medicago truncatula]
           gi|355496024|gb|AES77227.1| High mobility group family
           [Medicago truncatula]
          Length = 437

 Score = 52.0 bits (123), Expect(2) = 3e-09
 Identities = 23/40 (57%), Positives = 30/40 (75%)
 Frame = +2

Query: 296 IPESEYMNKTMTGIIDGKFEFDYLATVNVGSETLKGVLYE 415
           +P+      ++ G+IDGKFE  YL +V+VGSETLKGVLYE
Sbjct: 178 LPQVSSSGSSLAGVIDGKFESGYLVSVSVGSETLKGVLYE 217



 Score = 34.3 bits (77), Expect(2) = 3e-09
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +1

Query: 100 PPTKPDDPNELRNHYNEILYDYEQVYF--HGRSSPPLSQAPQVEPDLSKPLSDLE-LQP 267
           P T  +    LR +Y+ +LY YEQ+Y+    R +P  S A Q +  +S P S  + LQP
Sbjct: 101 PSTATNASFVLRKYYSSLLYHYEQIYYFRSKRWTPASSDALQNQSTMSVPASITQFLQP 159


>gb|ADN34129.1| high mobility group family [Cucumis melo subsp. melo]
          Length = 324

 Score = 44.3 bits (103), Expect(2) = 3e-08
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = +2

Query: 326 MTGIIDGKFEFDYLATVNVGSETLKGVLYEHVDP 427
           +TG IDGKF+  YL TV +GSE L+GVLY    P
Sbjct: 165 VTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQP 198



 Score = 38.5 bits (88), Expect(2) = 3e-08
 Identities = 22/53 (41%), Positives = 24/53 (45%)
 Frame = +1

Query: 103 PTKPDDPNELRNHYNEILYDYEQVYFHGRSSPPLSQAPQVEPDLSKPLSDLEL 261
           PT       LR HY  +LY YEQVY  GR  P     PQ       P S+ EL
Sbjct: 95  PTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPIC--VPQAPFSFGSPTSENEL 145


>ref|XP_004145526.1| PREDICTED: high mobility group B protein 9-like [Cucumis sativus]
           gi|449519744|ref|XP_004166894.1| PREDICTED: high
           mobility group B protein 9-like [Cucumis sativus]
          Length = 324

 Score = 43.9 bits (102), Expect(2) = 4e-08
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = +2

Query: 326 MTGIIDGKFEFDYLATVNVGSETLKGVLYEHVDP 427
           +TG IDGKF+  YL TV +GSE L+GVLY    P
Sbjct: 165 VTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQP 198



 Score = 38.1 bits (87), Expect(2) = 4e-08
 Identities = 22/53 (41%), Positives = 24/53 (45%)
 Frame = +1

Query: 103 PTKPDDPNELRNHYNEILYDYEQVYFHGRSSPPLSQAPQVEPDLSKPLSDLEL 261
           PT       LR HY  +LY YEQVY  GR  P     PQ       P S+ EL
Sbjct: 95  PTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPIC--VPQAPFPFGSPTSENEL 145


>ref|NP_171980.1| high mobility group-box and ARID domain-binding domain-containing
           protein [Arabidopsis thaliana]
           gi|75192516|sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High
           mobility group B protein 15; AltName:
           Full=Nucleosome/chromatin assembly factor group D 15
           gi|7211978|gb|AAF40449.1|AC004809_7 Contains similarity
           to the high mobility group family PF|00505 [Arabidopsis
           thaliana] gi|56236040|gb|AAV84476.1| At1g04880
           [Arabidopsis thaliana] gi|56790208|gb|AAW30021.1|
           At1g04880 [Arabidopsis thaliana]
           gi|225897878|dbj|BAH30271.1| hypothetical protein
           [Arabidopsis thaliana] gi|332189634|gb|AEE27755.1| high
           mobility group-box and ARID domain-binding
           domain-containing protein [Arabidopsis thaliana]
          Length = 448

 Score = 46.2 bits (108), Expect(2) = 1e-07
 Identities = 20/30 (66%), Positives = 24/30 (80%)
 Frame = +2

Query: 326 MTGIIDGKFEFDYLATVNVGSETLKGVLYE 415
           + G+IDGKFE  YL TV +GSE LKGVLY+
Sbjct: 178 VVGVIDGKFESGYLVTVTIGSEQLKGVLYQ 207



 Score = 34.7 bits (78), Expect(2) = 1e-07
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +1

Query: 100 PPTKPDDPNELRNHYNEILYDYEQVYF---HGRSSPPLSQAPQVEP 228
           PPT  +    LR +Y  +L +YEQ+YF   +G+  P   Q+P   P
Sbjct: 94  PPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQIPPDSMQSPSARP 139