BLASTX nr result

ID: Coptis23_contig00029712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029712
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529601.1| Kinesin-II 85 kDa subunit, putative [Ricinus...    64   9e-15
emb|CBI31422.3| unnamed protein product [Vitis vinifera]               49   6e-12
ref|XP_002273191.2| PREDICTED: armadillo repeat-containing kines...    49   6e-12
ref|XP_002315323.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-10
emb|CAB41097.2| kinesin-like protein [Arabidopsis thaliana]            46   2e-08

>ref|XP_002529601.1| Kinesin-II 85 kDa subunit, putative [Ricinus communis]
           gi|223530934|gb|EEF32793.1| Kinesin-II 85 kDa subunit,
           putative [Ricinus communis]
          Length = 1051

 Score = 63.9 bits (154), Expect(2) = 9e-15
 Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
 Frame = -3

Query: 686 LEESKENHLENSTYQKLLADTTQMYXXXXXXXXXXXXXEHACFGIAQEELHVVKKVLSDY 507
           L+ES+++ LENSTYQK+LADTTQMY             EHAC+    EEL+V+K++LSD 
Sbjct: 522 LKESQQHQLENSTYQKVLADTTQMYERKIAEINKKFEDEHACYVRTDEELYVMKQLLSDC 581

Query: 506 QTSFPIHGQNEID-ELRLK-LREICELYK 426
           Q S   + Q E++  + LK L E  +LY+
Sbjct: 582 QKS---NKQLEVENSMYLKVLEETRQLYE 607



 Score = 42.0 bits (97), Expect(2) = 9e-15
 Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
 Frame = -2

Query: 378 IQEQNEVAELGMKVQESFQLHEKTLKELQHMSRKNEDLISEQIQGGNEI----KKLTVKL 211
           I++  E+ EL  K+QE +QLH+ T+ ELQ +    +DL+ E+     E+    ++L V+ 
Sbjct: 645 IEDLEEIEELKGKLQEMYQLHDNTINELQSLKSDKKDLLQEKTTLIEELCDLKRRLLVEE 704

Query: 210 QEMSNL-HE-----KTVNELQSLQADQKTLLSEKV 124
           ++  +L HE     K+  E  S   D+++   E +
Sbjct: 705 KQRKSLEHELAKLKKSAPESDSAFEDKQSYTKENI 739



 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
 Frame = -2

Query: 405 ENEELMFQKIQEQN------EVAELGMKVQESFQLHEKTLKELQHMSRKNEDLISEQIQG 244
           E E  M+ K+ E+       + AEL  ++++     E   ++L   ++   D   + I+ 
Sbjct: 589 EVENSMYLKVLEETRQLYEKKTAELSKQLEDEHARFEGLEEQLDQANKLLSDG-QDSIED 647

Query: 243 GNEIKKLTVKLQEMSNLHEKTVNELQSLQADQKTLLSEKVWFI 115
             EI++L  KLQEM  LH+ T+NELQSL++D+K LL EK   I
Sbjct: 648 LEEIEELKGKLQEMYQLHDNTINELQSLKSDKKDLLQEKTTLI 690


>emb|CBI31422.3| unnamed protein product [Vitis vinifera]
          Length = 1331

 Score = 49.3 bits (116), Expect(2) = 6e-12
 Identities = 28/63 (44%), Positives = 39/63 (61%)
 Frame = -3

Query: 692 VTLEESKENHLENSTYQKLLADTTQMYXXXXXXXXXXXXXEHACFGIAQEELHVVKKVLS 513
           ++L+ SK+  LENST Q++LADTTQMY             E A +  A E+L V+KK+LS
Sbjct: 480 MSLKHSKQYQLENSTCQQVLADTTQMYEKKIAELIKQLGDERARYETAGEQLDVIKKLLS 539

Query: 512 DYQ 504
           + Q
Sbjct: 540 ESQ 542



 Score = 47.0 bits (110), Expect(2) = 6e-12
 Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
 Frame = -2

Query: 429 QEFQSLKTENEELMFQKI------QEQNEVAELGMKVQESFQLHEKTLKELQHMSRKNED 268
           Q+ Q  KTEN    +QK         + ++AEL  ++++     E   K+L     KN  
Sbjct: 543 QKIQQQKTENST--YQKALADTTQMYEKKIAELTKQLEDEHARFEGAEKQLDEA--KNLL 598

Query: 267 LISEQIQGGNEIKKLTVKLQEMSNLHEKTVNELQSLQADQKTLLSEK 127
              ++    +EI +L ++L EM    E +VNELQSLQ++   LLSEK
Sbjct: 599 SCHQKPMQQDEIDELKMRLHEMGRHQELSVNELQSLQSEYNDLLSEK 645


>ref|XP_002273191.2| PREDICTED: armadillo repeat-containing kinesin-like protein 1-like
           [Vitis vinifera]
          Length = 1017

 Score = 49.3 bits (116), Expect(2) = 6e-12
 Identities = 28/63 (44%), Positives = 39/63 (61%)
 Frame = -3

Query: 692 VTLEESKENHLENSTYQKLLADTTQMYXXXXXXXXXXXXXEHACFGIAQEELHVVKKVLS 513
           ++L+ SK+  LENST Q++LADTTQMY             E A +  A E+L V+KK+LS
Sbjct: 509 MSLKHSKQYQLENSTCQQVLADTTQMYEKKIAELIKQLGDERARYETAGEQLDVIKKLLS 568

Query: 512 DYQ 504
           + Q
Sbjct: 569 ESQ 571



 Score = 47.0 bits (110), Expect(2) = 6e-12
 Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
 Frame = -2

Query: 429 QEFQSLKTENEELMFQKI------QEQNEVAELGMKVQES---FQLHEKTLKELQHMSRK 277
           Q+ Q  KTEN    +QK         + ++AEL  ++++    F+  EK L E +++   
Sbjct: 572 QKIQQQKTENST--YQKALADTTQMYEKKIAELTKQLEDEHARFEGAEKQLDEAKNL--- 626

Query: 276 NEDLISEQIQGGNEIKKLTVKLQEMSNLHEKTVNELQSLQADQKTLLSEK 127
              L   Q    +EI +L ++L EM    E +VNELQSLQ++   LLSEK
Sbjct: 627 ---LSCHQKPMQDEIDELKMRLHEMGRHQELSVNELQSLQSEYNDLLSEK 673


>ref|XP_002315323.1| predicted protein [Populus trichocarpa] gi|222864363|gb|EEF01494.1|
           predicted protein [Populus trichocarpa]
          Length = 1067

 Score = 55.8 bits (133), Expect(2) = 3e-10
 Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
 Frame = -3

Query: 692 VTLEESKENHLENSTYQKLLADTTQMYXXXXXXXXXXXXXEHACFGIAQEELHVVKKVLS 513
           ++L  S+++ LENSTYQK+LADTTQMY             E A    A+E L++ K +L 
Sbjct: 555 ISLNNSQQHQLENSTYQKMLADTTQMYEKKISELIKQLENECARCERAEERLNLTKNLLG 614

Query: 512 DYQTSFPIHG-QNEI------DELRLKLREICELYK 426
           DYQ S   H  +N +      D  +L  ++I EL K
Sbjct: 615 DYQKSIKQHEVENSVYQKALADTTQLYEKKIAELIK 650



 Score = 34.7 bits (78), Expect(2) = 3e-10
 Identities = 21/74 (28%), Positives = 35/74 (47%)
 Frame = -2

Query: 378 IQEQNEVAELGMKVQESFQLHEKTLKELQHMSRKNEDLISEQIQGGNEIKKLTVKLQEMS 199
           +Q+  E AEL MK+Q   Q HE    ELQ +  ++++L  E+     E+  +   L    
Sbjct: 680 MQDLKETAELRMKLQRICQAHESAQTELQSLKLEHKNLSREKAILSEELHDMKQALAAEE 739

Query: 198 NLHEKTVNELQSLQ 157
              +   +EL  L+
Sbjct: 740 KQRKSIEHELDKLK 753



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 33/84 (39%), Positives = 47/84 (55%)
 Frame = -3

Query: 674 KENHLENSTYQKLLADTTQMYXXXXXXXXXXXXXEHACFGIAQEELHVVKKVLSDYQTSF 495
           K++ +ENS YQK LADTTQ+Y             EH     A+E+L +  K+LSD Q   
Sbjct: 621 KQHEVENSVYQKALADTTQLYEKKIAELIKQVEDEHTRLEGAEEQLDLANKLLSDQQ--H 678

Query: 494 PIHGQNEIDELRLKLREICELYKS 423
            +    E  ELR+KL+ IC+ ++S
Sbjct: 679 LMQDLKETAELRMKLQRICQAHES 702


>emb|CAB41097.2| kinesin-like protein [Arabidopsis thaliana]
          Length = 1070

 Score = 46.2 bits (108), Expect(2) = 2e-08
 Identities = 27/83 (32%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
 Frame = -2

Query: 369 QNEVAELGMKVQESFQLHEKTLKELQHMSRKNED--LISEQIQGGNEIKKLTVKLQEMSN 196
           ++++AEL  K++           +L+ M R   D  +IS++ +  NE+K   +KL+E+S 
Sbjct: 653 ESKIAELQKKLEGENARSNAAEDQLRQMKRLISDRQVISQENEEANELK---IKLEELSQ 709

Query: 195 LHEKTVNELQSLQADQKTLLSEK 127
           ++E TV+ELQ+++ D   LL +K
Sbjct: 710 MYESTVDELQTVKLDYDDLLQQK 732



 Score = 38.5 bits (88), Expect(2) = 2e-08
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = -3

Query: 686 LEESKENHLENSTYQKLLADTTQMYXXXXXXXXXXXXXEHACFGIAQEELHVVKKVLSDY 507
           L+ +K+  LENS Y+  LADT+Q+Y             E A    A+ +L  +K +LS  
Sbjct: 568 LKNTKQQQLENSAYEAKLADTSQVYEKKIAELVQRVEDEQARSTNAEHQLTEMKNILSKQ 627

Query: 506 QTSFPIHGQNEID-ELRLKLREICELYKS 423
           Q S  IH Q + + + + +L E    Y+S
Sbjct: 628 QKS--IHEQEKGNYQYQRELAETTHTYES 654


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