BLASTX nr result

ID: Coptis23_contig00029711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029711
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002439947.1| hypothetical protein SORBIDRAFT_09g023200 [S...    69   3e-10
ref|NP_001174464.1| Os05g0473400 [Oryza sativa Japonica Group] g...    68   7e-10
gb|AAU44237.1| unknown protein [Oryza sativa Japonica Group]           68   7e-10
ref|NP_001044623.2| Os01g0817400 [Oryza sativa Japonica Group] g...    65   6e-09
ref|XP_002456534.1| hypothetical protein SORBIDRAFT_03g038000 [S...    65   6e-09

>ref|XP_002439947.1| hypothetical protein SORBIDRAFT_09g023200 [Sorghum bicolor]
           gi|241945232|gb|EES18377.1| hypothetical protein
           SORBIDRAFT_09g023200 [Sorghum bicolor]
          Length = 830

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/83 (39%), Positives = 55/83 (66%)
 Frame = -3

Query: 287 VSQIFAGIILGPSCLSRFKGLRKMIFPRGSFLTLEVYASLGLVYQTFLTGVQMNHPRMIL 108
           VS+I  GIILGPS LSR    ++M+FP      L   A+ GL+Y  FL GV+M+ P++++
Sbjct: 61  VSEIMGGIILGPSMLSRSPAFKEMVFPARGDAVLHTVATFGLMYAIFLIGVRMD-PKLVV 119

Query: 107 KAGRKAILICVLVFVIPSTLSIA 39
           ++G+K ++I +  F++P  ++ A
Sbjct: 120 RSGKKGVIIGLSGFILPLAMTTA 142


>ref|NP_001174464.1| Os05g0473400 [Oryza sativa Japonica Group]
           gi|255676441|dbj|BAH93192.1| Os05g0473400 [Oryza sativa
           Japonica Group]
          Length = 834

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/81 (41%), Positives = 54/81 (66%)
 Frame = -3

Query: 287 VSQIFAGIILGPSCLSRFKGLRKMIFPRGSFLTLEVYASLGLVYQTFLTGVQMNHPRMIL 108
           VS+I  GIILGPS LSR    R+++FP      L   A+ GL+Y  FL GV+M+ PR+++
Sbjct: 60  VSEIMGGIILGPSVLSRHAAFREVVFPARGEPVLNTVATFGLMYVIFLIGVRMD-PRLVV 118

Query: 107 KAGRKAILICVLVFVIPSTLS 45
           ++GRK ++I +  F++P  ++
Sbjct: 119 RSGRKGVVIGLSGFLLPLAMT 139


>gb|AAU44237.1| unknown protein [Oryza sativa Japonica Group]
          Length = 673

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/81 (41%), Positives = 54/81 (66%)
 Frame = -3

Query: 287 VSQIFAGIILGPSCLSRFKGLRKMIFPRGSFLTLEVYASLGLVYQTFLTGVQMNHPRMIL 108
           VS+I  GIILGPS LSR    R+++FP      L   A+ GL+Y  FL GV+M+ PR+++
Sbjct: 60  VSEIMGGIILGPSVLSRHAAFREVVFPARGEPVLNTVATFGLMYVIFLIGVRMD-PRLVV 118

Query: 107 KAGRKAILICVLVFVIPSTLS 45
           ++GRK ++I +  F++P  ++
Sbjct: 119 RSGRKGVVIGLSGFLLPLAMT 139


>ref|NP_001044623.2| Os01g0817400 [Oryza sativa Japonica Group]
           gi|255673818|dbj|BAF06537.2| Os01g0817400 [Oryza sativa
           Japonica Group]
          Length = 572

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/83 (38%), Positives = 54/83 (65%)
 Frame = -3

Query: 287 VSQIFAGIILGPSCLSRFKGLRKMIFPRGSFLTLEVYASLGLVYQTFLTGVQMNHPRMIL 108
           +++I AG++LGPS + + +    M+FP+ S LTLE  A LGL+Y  FL G++M+   +I 
Sbjct: 87  IAEILAGVVLGPSVMGQVEVWATMVFPQRSLLTLETVAHLGLLYFLFLVGLEMDLD-VIR 145

Query: 107 KAGRKAILICVLVFVIPSTLSIA 39
           ++G+KA+ + V    +P  + IA
Sbjct: 146 RSGKKALFVAVAGMALPFCIGIA 168


>ref|XP_002456534.1| hypothetical protein SORBIDRAFT_03g038000 [Sorghum bicolor]
           gi|241928509|gb|EES01654.1| hypothetical protein
           SORBIDRAFT_03g038000 [Sorghum bicolor]
          Length = 869

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/83 (38%), Positives = 53/83 (63%)
 Frame = -3

Query: 287 VSQIFAGIILGPSCLSRFKGLRKMIFPRGSFLTLEVYASLGLVYQTFLTGVQMNHPRMIL 108
           +++I AG++LGPS + + +    M+FP  S LTLE  A LGL+Y  FL G++M+   +I 
Sbjct: 80  IAEILAGVLLGPSVMGQIETWETMVFPMRSLLTLETVAHLGLLYFLFLVGLEMDID-VIR 138

Query: 107 KAGRKAILICVLVFVIPSTLSIA 39
           ++G+KA+ I +    +P  + IA
Sbjct: 139 RSGKKALFIAIAGMALPFCMGIA 161


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