BLASTX nr result
ID: Coptis23_contig00029709
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00029709
(1226 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera] 228 2e-57
emb|CBI16896.3| unnamed protein product [Vitis vinifera] 228 3e-57
ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containi... 228 3e-57
ref|XP_003552628.1| PREDICTED: pentatricopeptide repeat-containi... 222 1e-55
ref|XP_003530467.1| PREDICTED: pentatricopeptide repeat-containi... 221 2e-55
>emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera]
Length = 650
Score = 228 bits (581), Expect = 2e-57
Identities = 142/385 (36%), Positives = 223/385 (57%), Gaps = 1/385 (0%)
Frame = +1
Query: 73 FSTESVLEQNNEDDHVLAVLTDILSKSTSNDEIKTALKSNHVLVTPKLVFSTLNSLQGDV 252
FS++ LE D HV V TDI SK DEIK ++S+ ++V+ +LV L +L+ +
Sbjct: 70 FSSDLALEDKGLD-HV--VFTDIFSKPKGFDEIKNEVESSDIVVSHELVLKVLENLESNP 126
Query: 253 ETARKFFHFVDETENERMLTFNCYYFMLGILGTSGKEYVHEFWRLLQVMXXXXXXXXXXX 432
E AR F +V E+ER L+ Y MLGILG++G +V EFW L++VM
Sbjct: 127 EVARXVFDWVLRAESER-LSSKSYNLMLGILGSNG--FVSEFWDLVEVMKKKGYGVSKAA 183
Query: 433 XYDKVADSFQXXXXXXXXXXXXXMYSNSQAENSMKQVASRISNVINEKDWFDFPSDVQQK 612
Y K ++F+ ++++ +NS++++ SR+S +I + W D +V+ +
Sbjct: 184 -YVKALENFEKEALGSDLEKLRGLFASGSVDNSIQKICSRVSKIIRSEVWGD---NVEGQ 239
Query: 613 ILDINCIWSPELIKMVVEKVVGNPRKILLFFWWFQVTFSFKPDYFLYDAVVKVLAHSHNF 792
+ ++ +S +L+ MV+E + P K L+FF W + + K D Y+A+++VL
Sbjct: 240 LHNLKVTFSGDLVAMVLENLGLEPMKALIFFRWVEESDLXKHDKXTYNAMLRVLGRED-- 297
Query: 793 RYVGCMP-FWRIVVEMKACGHEMEMETYSFVMLLFCKKQLIEDAVELYEYKMSSATKPPV 969
C+ FW++ EM+ G+EME+ TY V+ F K+++I + V+LYE+ MS A KP +
Sbjct: 298 ----CIERFWKVADEMRNAGYEMEVATYXKVVGRFYKRKMIXEVVDLYEFAMSGANKPSM 353
Query: 970 QDGVSLFRNVVEWGRKLDMRLFSKVVETFTEGGYSLTTSILDEVVKSLISVEKVKECGKI 1149
D L R +V + LD+ LFS+VV T+TEGG LT S+LD +KSL SV + EC K+
Sbjct: 354 YDCTFLLRKIVV-SKVLDISLFSRVVRTYTEGGNILTKSMLDAXLKSLTSVGRFGECNKL 412
Query: 1150 LKAMEKGGCVPSSELYNKIIYHLAT 1224
LKAME+GG V S + NKI + L++
Sbjct: 413 LKAMEEGGYVVGSGMQNKIAFGLSS 437
>emb|CBI16896.3| unnamed protein product [Vitis vinifera]
Length = 472
Score = 228 bits (580), Expect = 3e-57
Identities = 141/385 (36%), Positives = 225/385 (58%), Gaps = 1/385 (0%)
Frame = +1
Query: 73 FSTESVLEQNNEDDHVLAVLTDILSKSTSNDEIKTALKSNHVLVTPKLVFSTLNSLQGDV 252
FS++ LE D HV V TDI SK DEIK ++S+ ++V+ +LV L +L+ +
Sbjct: 70 FSSDLALEDKGLD-HV--VFTDIFSKPKGFDEIKNEVESSDIVVSHELVLKVLENLESNP 126
Query: 253 ETARKFFHFVDETENERMLTFNCYYFMLGILGTSGKEYVHEFWRLLQVMXXXXXXXXXXX 432
E AR F +V E+ER L+ Y MLGILG++G +V EFW L++VM
Sbjct: 127 EVARSVFDWVLRAESER-LSSKSYNLMLGILGSNG--FVSEFWDLVEVMKKKGYGVSKAA 183
Query: 433 XYDKVADSFQXXXXXXXXXXXXXMYSNSQAENSMKQVASRISNVINEKDWFDFPSDVQQK 612
Y K ++F+ ++++ ++S++++ SR+S +I + W D +V+ +
Sbjct: 184 -YVKALENFEKEALGSDLEKLRGLFASGSVDDSIQKICSRVSKIIRSEVWGD---NVEGQ 239
Query: 613 ILDINCIWSPELIKMVVEKVVGNPRKILLFFWWFQVTFSFKPDYFLYDAVVKVLAHSHNF 792
+ ++ +S +L+ MV+E + P K L+FF W + + K D Y+A+++VL
Sbjct: 240 LHNLKVTFSGDLVAMVLENLGLEPMKALIFFRWVEESDLVKHDKQTYNAMLRVLGRED-- 297
Query: 793 RYVGCMP-FWRIVVEMKACGHEMEMETYSFVMLLFCKKQLIEDAVELYEYKMSSATKPPV 969
C+ FW++ EM+ G+EME+ TY V+ F K+++I++ V+LYE+ MS A KP +
Sbjct: 298 ----CIERFWKVADEMRNAGYEMEVATYFKVVGRFYKRKMIKEVVDLYEFAMSGANKPSM 353
Query: 970 QDGVSLFRNVVEWGRKLDMRLFSKVVETFTEGGYSLTTSILDEVVKSLISVEKVKECGKI 1149
D L R +V + LD+ LFS+VV T+TEGG LT S+LD ++KSL SV + EC K+
Sbjct: 354 YDCTFLLRKIVV-SKVLDISLFSRVVRTYTEGGNILTKSMLDAILKSLTSVGRFGECNKL 412
Query: 1150 LKAMEKGGCVPSSELYNKIIYHLAT 1224
LKAME+GG V S + NKI + L++
Sbjct: 413 LKAMEEGGYVVGSGMQNKIAFGLSS 437
>ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 228 bits (580), Expect = 3e-57
Identities = 141/385 (36%), Positives = 225/385 (58%), Gaps = 1/385 (0%)
Frame = +1
Query: 73 FSTESVLEQNNEDDHVLAVLTDILSKSTSNDEIKTALKSNHVLVTPKLVFSTLNSLQGDV 252
FS++ LE D HV V TDI SK DEIK ++S+ ++V+ +LV L +L+ +
Sbjct: 70 FSSDLALEDKGLD-HV--VFTDIFSKPKGFDEIKNEVESSDIVVSHELVLKVLENLESNP 126
Query: 253 ETARKFFHFVDETENERMLTFNCYYFMLGILGTSGKEYVHEFWRLLQVMXXXXXXXXXXX 432
E AR F +V E+ER L+ Y MLGILG++G +V EFW L++VM
Sbjct: 127 EVARSVFDWVLRAESER-LSSKSYNLMLGILGSNG--FVSEFWDLVEVMKKKGYGVSKAA 183
Query: 433 XYDKVADSFQXXXXXXXXXXXXXMYSNSQAENSMKQVASRISNVINEKDWFDFPSDVQQK 612
Y K ++F+ ++++ ++S++++ SR+S +I + W D +V+ +
Sbjct: 184 -YVKALENFEKEALGSDLEKLRGLFASGSVDDSIQKICSRVSKIIRSEVWGD---NVEGQ 239
Query: 613 ILDINCIWSPELIKMVVEKVVGNPRKILLFFWWFQVTFSFKPDYFLYDAVVKVLAHSHNF 792
+ ++ +S +L+ MV+E + P K L+FF W + + K D Y+A+++VL
Sbjct: 240 LHNLKVTFSGDLVAMVLENLGLEPMKALIFFRWVEESDLVKHDKQTYNAMLRVLGRED-- 297
Query: 793 RYVGCMP-FWRIVVEMKACGHEMEMETYSFVMLLFCKKQLIEDAVELYEYKMSSATKPPV 969
C+ FW++ EM+ G+EME+ TY V+ F K+++I++ V+LYE+ MS A KP +
Sbjct: 298 ----CIERFWKVADEMRNAGYEMEVATYFKVVGRFYKRKMIKEVVDLYEFAMSGANKPSM 353
Query: 970 QDGVSLFRNVVEWGRKLDMRLFSKVVETFTEGGYSLTTSILDEVVKSLISVEKVKECGKI 1149
D L R +V + LD+ LFS+VV T+TEGG LT S+LD ++KSL SV + EC K+
Sbjct: 354 YDCTFLLRKIVV-SKVLDISLFSRVVRTYTEGGNILTKSMLDAILKSLTSVGRFGECNKL 412
Query: 1150 LKAMEKGGCVPSSELYNKIIYHLAT 1224
LKAME+GG V S + NKI + L++
Sbjct: 413 LKAMEEGGYVVGSGMQNKIAFGLSS 437
>ref|XP_003552628.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
mitochondrial-like [Glycine max]
Length = 629
Score = 222 bits (566), Expect = 1e-55
Identities = 146/391 (37%), Positives = 216/391 (55%)
Frame = +1
Query: 46 PSTRRSCNYFSTESVLEQNNEDDHVLAVLTDILSKSTSNDEIKTALKSNHVLVTPKLVFS 225
PS RR FS+E VL Q + DH+L + DI SK +++ KT L SN V +T V +
Sbjct: 45 PSFRR----FSSEPVLAQA-DTDHLL--VADIFSKPVDSEDFKTLLGSNRVSITHDAVLA 97
Query: 226 TLNSLQGDVETARKFFHFVDETENERMLTFNCYYFMLGILGTSGKEYVHEFWRLLQVMXX 405
L +V+ AR+FF +V E ER L+ CY ML +LGT+G +V EFW L+ VM
Sbjct: 98 VLGKFDSNVDAARRFFQWVSENHPER-LSSKCYNSMLCVLGTNG--FVDEFWDLVNVMKK 154
Query: 406 XXXXXXXXXXYDKVADSFQXXXXXXXXXXXXXMYSNSQAENSMKQVASRISNVINEKDWF 585
++V +SF+ ++ NS+ +N + + ++ W
Sbjct: 155 KGYGVSKGVK-ERVLESFEKGGMDGDVAKLKGLFDNSKEKN-----IAIVCRIVRNNVWG 208
Query: 586 DFPSDVQQKILDINCIWSPELIKMVVEKVVGNPRKILLFFWWFQVTFSFKPDYFLYDAVV 765
D DV+++I D+N +S E++K V+E +V P K L+FF W + + FK D Y+A+
Sbjct: 209 D---DVEKQIEDLNVGFSSEVVKTVLESLVLEPVKALIFFRWLEESGLFKHDGRTYNAMA 265
Query: 766 KVLAHSHNFRYVGCMPFWRIVVEMKACGHEMEMETYSFVMLLFCKKQLIEDAVELYEYKM 945
+VL FW++V +M++ G EME ET+ V+ FCK+++++DAVELYE+ M
Sbjct: 266 RVLGREDLIDR-----FWKLVGDMRSAGFEMEAETFVKVLGRFCKRRMVKDAVELYEFAM 320
Query: 946 SSATKPPVQDGVSLFRNVVEWGRKLDMRLFSKVVETFTEGGYSLTTSILDEVVKSLISVE 1125
+ A KP VQ V L R V G++LD LFS+V++ FT G LT S+ + V+KSL SV
Sbjct: 321 AGANKPTVQCCVFLLRKVAA-GKELDTDLFSRVLKVFTGNGNVLTDSVANAVLKSLTSVG 379
Query: 1126 KVKECGKILKAMEKGGCVPSSELYNKIIYHL 1218
+ E K+LK ME G V L +KI Y L
Sbjct: 380 RTGEWNKVLKEMEDCGFVAGGSLQSKIAYRL 410
>ref|XP_003530467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
mitochondrial-like [Glycine max]
Length = 628
Score = 221 bits (564), Expect = 2e-55
Identities = 142/386 (36%), Positives = 211/386 (54%)
Frame = +1
Query: 61 SCNYFSTESVLEQNNEDDHVLAVLTDILSKSTSNDEIKTALKSNHVLVTPKLVFSTLNSL 240
S +FS+E VL Q + D+ ++ DI SK +++ KT L SN V++T V + L L
Sbjct: 46 SFRHFSSEPVLAQADTDN---LLVVDIFSKPADSEDFKTLLDSNRVMITHDAVLAVLWKL 102
Query: 241 QGDVETARKFFHFVDETENERMLTFNCYYFMLGILGTSGKEYVHEFWRLLQVMXXXXXXX 420
+VE AR+FF +V E ER L+ CY ML +LGT+G VHEFW L+ VM
Sbjct: 103 DSNVEAARRFFLWVSENHPER-LSSKCYNSMLRVLGTNG--VVHEFWDLVDVMKKKGYGV 159
Query: 421 XXXXXYDKVADSFQXXXXXXXXXXXXXMYSNSQAENSMKQVASRISNVINEKDWFDFPSD 600
+ V +SF+ +Y N +N + + ++ W D D
Sbjct: 160 SKGVK-EIVLESFEKGGMVADVAKLKGLYDNLNEKN-----IAIVCRIVRNNVWDD---D 210
Query: 601 VQQKILDINCIWSPELIKMVVEKVVGNPRKILLFFWWFQVTFSFKPDYFLYDAVVKVLAH 780
V+++I D+N +S +++KMV+E + P K L+FF W + + FK D Y+A+ +VL
Sbjct: 211 VERQIKDLNVGFSGDVVKMVLESLASEPAKALIFFRWLEESGMFKQDGATYNAMARVLGR 270
Query: 781 SHNFRYVGCMPFWRIVVEMKACGHEMEMETYSFVMLLFCKKQLIEDAVELYEYKMSSATK 960
+ FW++V +M+ G EME ET+ V+ FCK+++++DAVELYE+ M+ K
Sbjct: 271 EDSIDR-----FWKLVGDMRNAGFEMEFETFVKVLGRFCKRRMVKDAVELYEFAMTGVNK 325
Query: 961 PPVQDGVSLFRNVVEWGRKLDMRLFSKVVETFTEGGYSLTTSILDEVVKSLISVEKVKEC 1140
P VQ V L R V G++LDM LF +V++ FT G LT S+ D V+K+L SV + E
Sbjct: 326 PTVQCCVFLLRKVAA-GKELDMDLFLRVLKVFTGSGNLLTDSMADAVLKTLTSVGRTGEW 384
Query: 1141 GKILKAMEKGGCVPSSELYNKIIYHL 1218
K+LK ME GC L +KI Y L
Sbjct: 385 NKVLKEMEIVGCC-RCNLQSKIAYRL 409