BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029700
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein A...    55   8e-06

>ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 342

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/83 (34%), Positives = 41/83 (49%)
 Frame = +2

Query: 68  QDQVVWTPHSRGQFTSHSAYQALSPVKDKKKWQKLVWGKWVLPRHSFTT**LFSQSLPTQ 247
           +D+ VW P SR  F+  SA++ + P   +  W  L+WG   +P+HSF         L T+
Sbjct: 168 EDRWVWVPGSRDSFSITSAWETIRPHSSRVGWSGLLWGGGNIPKHSFCAWLAIRDRLSTR 227

Query: 248 DRLVQRKILQSSTCCSLCNNNWE 316
           DRL  R        C LC  N+E
Sbjct: 228 DRL-SRWDRSIPLSCLLCGGNYE 249