BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029691
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002439577.1| hypothetical protein SORBIDRAFT_09g014016 [S...   124   8e-27
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...   114   8e-24
ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulg...   110   2e-22
emb|CBI23503.3| unnamed protein product [Vitis vinifera]              102   3e-20
ref|XP_002446122.1| hypothetical protein SORBIDRAFT_06g002025 [S...   101   7e-20

>ref|XP_002439577.1| hypothetical protein SORBIDRAFT_09g014016 [Sorghum bicolor]
           gi|241944862|gb|EES18007.1| hypothetical protein
           SORBIDRAFT_09g014016 [Sorghum bicolor]
          Length = 100

 Score =  124 bits (311), Expect = 8e-27
 Identities = 63/79 (79%), Positives = 63/79 (79%)
 Frame = -3

Query: 238 KGSGWI*ESLCEPYXXXXXXXXXXXXXVYTFSVVVGPTHPICSMIYGSTGATHFDQLAKI 59
           K SGWI ESLCEPY             VYT SVVVGPTHPICSMIYGSTGATHFDQLAKI
Sbjct: 2   KSSGWIFESLCEPYAVRVARTVRRGVRVYTCSVVVGPTHPICSMIYGSTGATHFDQLAKI 61

Query: 58  LTGYEITGARSSGIFMGIL 2
           LTGYEITGARSSGIFMGIL
Sbjct: 62  LTGYEITGARSSGIFMGIL 80


>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
           gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
           [Medicago truncatula]
          Length = 1094

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/72 (80%), Positives = 58/72 (80%)
 Frame = -3

Query: 217 ESLCEPYXXXXXXXXXXXXXVYTFSVVVGPTHPICSMIYGSTGATHFDQLAKILTGYEIT 38
           ESLCEPY             VYT SVVVGPTHPICSMIYGSTGATHFDQLAKILTGYEIT
Sbjct: 91  ESLCEPYAVRVARTVTRGVRVYTCSVVVGPTHPICSMIYGSTGATHFDQLAKILTGYEIT 150

Query: 37  GARSSGIFMGIL 2
           GARSSGIFMGIL
Sbjct: 151 GARSSGIFMGIL 162


>ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435151|ref|YP_004222369.1| hypothetical
           protein BevumaM_p136 [Beta vulgaris subsp. maritima]
           gi|346683242|ref|YP_004842174.1| hypothetical protein
           BemaM_p130 [Beta macrocarpa] gi|9049306|dbj|BAA99316.1|
           orf107b [Beta vulgaris subsp. vulgaris]
           gi|317905601|emb|CBJ14008.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439884|emb|CBJ17584.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148038|emb|CBJ20702.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500160|emb|CBX24979.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977914|emb|CBL54138.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 107

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/53 (94%), Positives = 51/53 (96%)
 Frame = +2

Query: 80  VGSSSRPIDHGTNRVGRPNHHTKRIDANPPRYRTCDSHRIRLAQRLLNPSRAF 238
           +GSS RPIDHGTNRVGRPNHHT RIDANPPRYRTCDSHRIRLAQRLLNPSRAF
Sbjct: 1   MGSSCRPIDHGTNRVGRPNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSRAF 53


>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  102 bits (254), Expect = 3e-20
 Identities = 48/51 (94%), Positives = 50/51 (98%)
 Frame = -3

Query: 154 YTFSVVVGPTHPICSMIYGSTGATHFDQLAKILTGYEITGARSSGIFMGIL 2
           YT+SV VGPTHPICSMIYGSTGATHFDQLAKILTGYEITGARSSG+FMGIL
Sbjct: 34  YTYSVRVGPTHPICSMIYGSTGATHFDQLAKILTGYEITGARSSGLFMGIL 84


>ref|XP_002446122.1| hypothetical protein SORBIDRAFT_06g002025 [Sorghum bicolor]
           gi|241937305|gb|EES10450.1| hypothetical protein
           SORBIDRAFT_06g002025 [Sorghum bicolor]
          Length = 132

 Score =  101 bits (251), Expect = 7e-20
 Identities = 53/79 (67%), Positives = 57/79 (72%), Gaps = 11/79 (13%)
 Frame = +2

Query: 71  LIEVGSSSRPIDHGTNRVGRPNHHTKRIDANPPRYRTCDSHRIRLAQRL----------- 217
           LIEVGSSSRPIDHGTNRV RPNHHT  IDANPP YRTCDSHRIRL  R            
Sbjct: 1   LIEVGSSSRPIDHGTNRVSRPNHHTTCIDANPPPYRTCDSHRIRLTVRATLTDGSHKDSK 60

Query: 218 LNPSRAFFPSLLSNPRSNL 274
           ++P + F P LLSNP+SNL
Sbjct: 61  IHP-KLFIPPLLSNPQSNL 78