BLASTX nr result
ID: Coptis23_contig00029683
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00029683 (240 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAL09479.1|AF359521_1 inward rectifying shaker-like K+ channe... 77 1e-12 emb|CBI30869.3| unnamed protein product [Vitis vinifera] 76 3e-12 ref|XP_002275549.1| PREDICTED: potassium channel KAT1 [Vitis vin... 76 3e-12 gb|AAL24466.1|AF359522_1 inward rectifying potassium channel [Vi... 76 3e-12 ref|XP_003541662.1| PREDICTED: potassium channel KAT1-like [Glyc... 67 1e-09 >gb|AAL09479.1|AF359521_1 inward rectifying shaker-like K+ channel [Vitis vinifera] Length = 791 Score = 77.4 bits (189), Expect = 1e-12 Identities = 41/74 (55%), Positives = 49/74 (66%), Gaps = 4/74 (5%) Frame = +1 Query: 31 VMSLAKRRVTIHKNLQK----ENQLGKXXXXXXXXXXXXRIAGHKFEGYHPTKVINIESA 198 VM+L KRRVTIH+ Q + QLGK +IAG KF GY+PTKV++ +A Sbjct: 700 VMTLTKRRVTIHRQFQNASTSQGQLGKLIILPDSIEELLQIAGQKFGGYNPTKVVSAGNA 759 Query: 199 EIDDISVIRDGDHL 240 EIDDISVIRDGDHL Sbjct: 760 EIDDISVIRDGDHL 773 >emb|CBI30869.3| unnamed protein product [Vitis vinifera] Length = 665 Score = 75.9 bits (185), Expect = 3e-12 Identities = 40/74 (54%), Positives = 48/74 (64%), Gaps = 4/74 (5%) Frame = +1 Query: 31 VMSLAKRRVTIHKNLQK----ENQLGKXXXXXXXXXXXXRIAGHKFEGYHPTKVINIESA 198 VM+L KRRVTIH+ Q + Q GK +IAG KF GY+PTKV++ +A Sbjct: 574 VMTLTKRRVTIHRQFQNASTSQGQFGKLIILPDSIEELLQIAGQKFGGYNPTKVVSAGNA 633 Query: 199 EIDDISVIRDGDHL 240 EIDDISVIRDGDHL Sbjct: 634 EIDDISVIRDGDHL 647 >ref|XP_002275549.1| PREDICTED: potassium channel KAT1 [Vitis vinifera] Length = 791 Score = 75.9 bits (185), Expect = 3e-12 Identities = 40/74 (54%), Positives = 48/74 (64%), Gaps = 4/74 (5%) Frame = +1 Query: 31 VMSLAKRRVTIHKNLQK----ENQLGKXXXXXXXXXXXXRIAGHKFEGYHPTKVINIESA 198 VM+L KRRVTIH+ Q + Q GK +IAG KF GY+PTKV++ +A Sbjct: 700 VMTLTKRRVTIHRQFQNASTSQGQFGKLIILPDSIEELLQIAGQKFGGYNPTKVVSAGNA 759 Query: 199 EIDDISVIRDGDHL 240 EIDDISVIRDGDHL Sbjct: 760 EIDDISVIRDGDHL 773 >gb|AAL24466.1|AF359522_1 inward rectifying potassium channel [Vitis vinifera] Length = 791 Score = 75.9 bits (185), Expect = 3e-12 Identities = 40/74 (54%), Positives = 48/74 (64%), Gaps = 4/74 (5%) Frame = +1 Query: 31 VMSLAKRRVTIHKNLQK----ENQLGKXXXXXXXXXXXXRIAGHKFEGYHPTKVINIESA 198 VM+L KRRVTIH+ Q + Q GK +IAG KF GY+PTKV++ +A Sbjct: 700 VMTLTKRRVTIHRQFQNASTSQGQFGKLIILPDSIEELLQIAGQKFGGYNPTKVVSAGNA 759 Query: 199 EIDDISVIRDGDHL 240 EIDDISVIRDGDHL Sbjct: 760 EIDDISVIRDGDHL 773 >ref|XP_003541662.1| PREDICTED: potassium channel KAT1-like [Glycine max] Length = 777 Score = 67.4 bits (163), Expect = 1e-09 Identities = 37/70 (52%), Positives = 43/70 (61%), Gaps = 3/70 (4%) Frame = +1 Query: 40 LAKRRVTIH---KNLQKENQLGKXXXXXXXXXXXXRIAGHKFEGYHPTKVINIESAEIDD 210 L K+RVTIH Q GK +IAG KF G++PTKVIN E+AEIDD Sbjct: 696 LTKKRVTIHLLHSGSTSRGQHGKLIILPDSLEELLQIAGDKFGGFNPTKVINTENAEIDD 755 Query: 211 ISVIRDGDHL 240 I+VIRDGDHL Sbjct: 756 INVIRDGDHL 765