BLASTX nr result

ID: Coptis23_contig00029683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029683
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL09479.1|AF359521_1 inward rectifying shaker-like K+ channe...    77   1e-12
emb|CBI30869.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_002275549.1| PREDICTED: potassium channel KAT1 [Vitis vin...    76   3e-12
gb|AAL24466.1|AF359522_1 inward rectifying potassium channel [Vi...    76   3e-12
ref|XP_003541662.1| PREDICTED: potassium channel KAT1-like [Glyc...    67   1e-09

>gb|AAL09479.1|AF359521_1 inward rectifying shaker-like K+ channel [Vitis vinifera]
          Length = 791

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/74 (55%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
 Frame = +1

Query: 31  VMSLAKRRVTIHKNLQK----ENQLGKXXXXXXXXXXXXRIAGHKFEGYHPTKVINIESA 198
           VM+L KRRVTIH+  Q     + QLGK            +IAG KF GY+PTKV++  +A
Sbjct: 700 VMTLTKRRVTIHRQFQNASTSQGQLGKLIILPDSIEELLQIAGQKFGGYNPTKVVSAGNA 759

Query: 199 EIDDISVIRDGDHL 240
           EIDDISVIRDGDHL
Sbjct: 760 EIDDISVIRDGDHL 773


>emb|CBI30869.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/74 (54%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
 Frame = +1

Query: 31  VMSLAKRRVTIHKNLQK----ENQLGKXXXXXXXXXXXXRIAGHKFEGYHPTKVINIESA 198
           VM+L KRRVTIH+  Q     + Q GK            +IAG KF GY+PTKV++  +A
Sbjct: 574 VMTLTKRRVTIHRQFQNASTSQGQFGKLIILPDSIEELLQIAGQKFGGYNPTKVVSAGNA 633

Query: 199 EIDDISVIRDGDHL 240
           EIDDISVIRDGDHL
Sbjct: 634 EIDDISVIRDGDHL 647


>ref|XP_002275549.1| PREDICTED: potassium channel KAT1 [Vitis vinifera]
          Length = 791

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/74 (54%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
 Frame = +1

Query: 31  VMSLAKRRVTIHKNLQK----ENQLGKXXXXXXXXXXXXRIAGHKFEGYHPTKVINIESA 198
           VM+L KRRVTIH+  Q     + Q GK            +IAG KF GY+PTKV++  +A
Sbjct: 700 VMTLTKRRVTIHRQFQNASTSQGQFGKLIILPDSIEELLQIAGQKFGGYNPTKVVSAGNA 759

Query: 199 EIDDISVIRDGDHL 240
           EIDDISVIRDGDHL
Sbjct: 760 EIDDISVIRDGDHL 773


>gb|AAL24466.1|AF359522_1 inward rectifying potassium channel [Vitis vinifera]
          Length = 791

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/74 (54%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
 Frame = +1

Query: 31  VMSLAKRRVTIHKNLQK----ENQLGKXXXXXXXXXXXXRIAGHKFEGYHPTKVINIESA 198
           VM+L KRRVTIH+  Q     + Q GK            +IAG KF GY+PTKV++  +A
Sbjct: 700 VMTLTKRRVTIHRQFQNASTSQGQFGKLIILPDSIEELLQIAGQKFGGYNPTKVVSAGNA 759

Query: 199 EIDDISVIRDGDHL 240
           EIDDISVIRDGDHL
Sbjct: 760 EIDDISVIRDGDHL 773


>ref|XP_003541662.1| PREDICTED: potassium channel KAT1-like [Glycine max]
          Length = 777

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 37/70 (52%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
 Frame = +1

Query: 40  LAKRRVTIH---KNLQKENQLGKXXXXXXXXXXXXRIAGHKFEGYHPTKVINIESAEIDD 210
           L K+RVTIH          Q GK            +IAG KF G++PTKVIN E+AEIDD
Sbjct: 696 LTKKRVTIHLLHSGSTSRGQHGKLIILPDSLEELLQIAGDKFGGFNPTKVINTENAEIDD 755

Query: 211 ISVIRDGDHL 240
           I+VIRDGDHL
Sbjct: 756 INVIRDGDHL 765


Top