BLASTX nr result

ID: Coptis23_contig00029682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029682
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65599.1| hypothetical protein VITISV_025370 [Vitis vinifera]   360   2e-97
ref|XP_002265237.1| PREDICTED: U-box domain-containing protein 4...   359   6e-97
emb|CAN62879.1| hypothetical protein VITISV_010493 [Vitis vinifera]   359   6e-97
ref|XP_002265222.1| PREDICTED: U-box domain-containing protein 4...   356   4e-96
ref|XP_002304783.1| predicted protein [Populus trichocarpa] gi|2...   333   3e-89

>emb|CAN65599.1| hypothetical protein VITISV_025370 [Vitis vinifera]
          Length = 882

 Score =  360 bits (925), Expect = 2e-97
 Identities = 184/270 (68%), Positives = 218/270 (80%), Gaps = 1/270 (0%)
 Frame = -1

Query: 939  EKAAAVGLLGNLPVNDKRATEILKKAHLLSIIVSLLGSTTITFTPTRIRLVENVADILVR 760
            EKAAAVG+L NLPVNDK+AT+ LK+A+LL I+VS++ S   T TPT   LVE++A + +R
Sbjct: 613  EKAAAVGILSNLPVNDKKATDTLKRANLLPILVSIMSSFPATSTPTTCWLVESIAGVXIR 672

Query: 759  FTVPSDKKLQLLSAEQGVIPCLVKLLSIGSPVAKCRAATSLMQLSQNTQSLSHSKPSRWL 580
            FTVPSDKKLQL SAE GVIP LVKLLS GSPVAKCRAATSL QLSQN+ SL  S+ SRW 
Sbjct: 673  FTVPSDKKLQLFSAEHGVIPLLVKLLSSGSPVAKCRAATSLAQLSQNSLSLQKSRSSRWF 732

Query: 579  CISPTT-AHCEVHDGYCSIKSSFCLVKAGAITPLIQILEGKERDADEAVLCALATLLQDE 403
            C+ P+  A+CE+HDG+C +KS+FCL+KAGAI+PL+QILEG ER+ADEA L ALATL QDE
Sbjct: 733  CVPPSVDAYCEIHDGFCFVKSTFCLLKAGAISPLVQILEGDEREADEAALSALATLAQDE 792

Query: 402  IWEKGSNVIVKALGVHALTRVLEVGSFKAQEKALWVLERIFRLETNRVQYGEPAQVILID 223
            IWE G N I K  G   + +VLE+G+ KAQEKALW+LERIFR+E +RVQYGE AQV+LID
Sbjct: 793  IWEHGINHITKISGAQPIIKVLELGTVKAQEKALWILERIFRVEAHRVQYGESAQVVLID 852

Query: 222  LAQHSAPALKSKIAKILAHLELLQMQSDYF 133
            LAQ   P LKS IAK+LA LELLQ QS YF
Sbjct: 853  LAQKGDPKLKSTIAKLLAQLELLQAQSSYF 882


>ref|XP_002265237.1| PREDICTED: U-box domain-containing protein 43-like [Vitis vinifera]
          Length = 882

 Score =  359 bits (921), Expect = 6e-97
 Identities = 183/270 (67%), Positives = 218/270 (80%), Gaps = 1/270 (0%)
 Frame = -1

Query: 939  EKAAAVGLLGNLPVNDKRATEILKKAHLLSIIVSLLGSTTITFTPTRIRLVENVADILVR 760
            EKAAAVG+L NLPVNDK+AT+ LK+A+LL I+VS++ S   T TPT   LVE++A + +R
Sbjct: 613  EKAAAVGILSNLPVNDKKATDTLKRANLLPILVSIMSSFPATSTPTTCWLVESIAGVFIR 672

Query: 759  FTVPSDKKLQLLSAEQGVIPCLVKLLSIGSPVAKCRAATSLMQLSQNTQSLSHSKPSRWL 580
            FTVPSDKKLQ+ SAE GVIP LVKLLS GSPVAKCRAATSL QLSQN+ SL  S+ SRW 
Sbjct: 673  FTVPSDKKLQIFSAEHGVIPLLVKLLSSGSPVAKCRAATSLAQLSQNSLSLRKSRSSRWF 732

Query: 579  CISPTT-AHCEVHDGYCSIKSSFCLVKAGAITPLIQILEGKERDADEAVLCALATLLQDE 403
            C+ P+  A+CE+HDG+C +KS+FCL+KAGAI+PL+QILEG ER+ADEA L ALATL QDE
Sbjct: 733  CVPPSVDAYCEIHDGFCFVKSTFCLLKAGAISPLVQILEGDEREADEAALNALATLAQDE 792

Query: 402  IWEKGSNVIVKALGVHALTRVLEVGSFKAQEKALWVLERIFRLETNRVQYGEPAQVILID 223
            IWE G N I K  G   + +VLE+G+ KAQEKALW+LERIFR+E +RVQYGE AQV+LID
Sbjct: 793  IWEHGINRITKISGTQPIIKVLELGTVKAQEKALWILERIFRVEAHRVQYGESAQVVLID 852

Query: 222  LAQHSAPALKSKIAKILAHLELLQMQSDYF 133
            LAQ   P LKS IAK+LA LELLQ QS YF
Sbjct: 853  LAQKGDPKLKSTIAKLLAQLELLQAQSSYF 882


>emb|CAN62879.1| hypothetical protein VITISV_010493 [Vitis vinifera]
          Length = 845

 Score =  359 bits (921), Expect = 6e-97
 Identities = 183/270 (67%), Positives = 218/270 (80%), Gaps = 1/270 (0%)
 Frame = -1

Query: 939  EKAAAVGLLGNLPVNDKRATEILKKAHLLSIIVSLLGSTTITFTPTRIRLVENVADILVR 760
            EKAAAVG+L NLPVNDK+AT+ LK+A+LL I+VS++ S   T TPT   LVE++A + +R
Sbjct: 576  EKAAAVGILSNLPVNDKKATDTLKRANLLPILVSIMSSFPATSTPTTCWLVESIAGVFIR 635

Query: 759  FTVPSDKKLQLLSAEQGVIPCLVKLLSIGSPVAKCRAATSLMQLSQNTQSLSHSKPSRWL 580
            FTVPSDKKLQ+ SAE GVIP LVKLLS GSPVAKCRAATSL QLSQN+ SL  S+ SRW 
Sbjct: 636  FTVPSDKKLQIFSAEHGVIPLLVKLLSSGSPVAKCRAATSLAQLSQNSLSLRKSRSSRWF 695

Query: 579  CISPTT-AHCEVHDGYCSIKSSFCLVKAGAITPLIQILEGKERDADEAVLCALATLLQDE 403
            C+ P+  A+CE+HDG+C +KS+FCL+KAGAI+PL+QILEG ER+ADEA L ALATL QDE
Sbjct: 696  CVPPSVDAYCEIHDGFCFVKSTFCLLKAGAISPLVQILEGDEREADEAALNALATLAQDE 755

Query: 402  IWEKGSNVIVKALGVHALTRVLEVGSFKAQEKALWVLERIFRLETNRVQYGEPAQVILID 223
            IWE G N I K  G   + +VLE+G+ KAQEKALW+LERIFR+E +RVQYGE AQV+LID
Sbjct: 756  IWEHGINRITKISGTQPIIKVLELGTVKAQEKALWILERIFRVEAHRVQYGESAQVVLID 815

Query: 222  LAQHSAPALKSKIAKILAHLELLQMQSDYF 133
            LAQ   P LKS IAK+LA LELLQ QS YF
Sbjct: 816  LAQKGDPKLKSTIAKLLAQLELLQAQSSYF 845


>ref|XP_002265222.1| PREDICTED: U-box domain-containing protein 43-like [Vitis vinifera]
          Length = 886

 Score =  356 bits (914), Expect = 4e-96
 Identities = 182/270 (67%), Positives = 217/270 (80%), Gaps = 1/270 (0%)
 Frame = -1

Query: 939  EKAAAVGLLGNLPVNDKRATEILKKAHLLSIIVSLLGSTTITFTPTRIRLVENVADILVR 760
            EKAAAVG+L NLPVN+K+AT+ LK+A+LL I+VS++ S   T TPT   LVE++A + +R
Sbjct: 617  EKAAAVGILSNLPVNNKKATDTLKRANLLPILVSIMSSFPATSTPTTCWLVESIAGVFIR 676

Query: 759  FTVPSDKKLQLLSAEQGVIPCLVKLLSIGSPVAKCRAATSLMQLSQNTQSLSHSKPSRWL 580
            FTVPSDKKLQL SAE GVIP LVKLLS GSPVAKCRAATSL QLSQN+ SL  S+ SRW 
Sbjct: 677  FTVPSDKKLQLFSAEHGVIPLLVKLLSSGSPVAKCRAATSLAQLSQNSLSLQKSRSSRWF 736

Query: 579  CISPTT-AHCEVHDGYCSIKSSFCLVKAGAITPLIQILEGKERDADEAVLCALATLLQDE 403
            C+ P+  A+CE+HDG+C +KS+FCL+KAGAI+PL+QILEG ER+ADEA L ALATL  DE
Sbjct: 737  CVPPSVDAYCEIHDGFCFVKSTFCLLKAGAISPLVQILEGDEREADEAALSALATLALDE 796

Query: 402  IWEKGSNVIVKALGVHALTRVLEVGSFKAQEKALWVLERIFRLETNRVQYGEPAQVILID 223
            IWE G N I K  G   + +VLE+G+ KAQEKALW+LERIFR+E +RVQYGE AQV+LID
Sbjct: 797  IWEHGINHITKISGAQPIIKVLELGTVKAQEKALWILERIFRVEAHRVQYGESAQVVLID 856

Query: 222  LAQHSAPALKSKIAKILAHLELLQMQSDYF 133
            LAQ   P LKS IAK+LA LELLQ QS YF
Sbjct: 857  LAQKGDPKLKSTIAKLLAQLELLQAQSSYF 886


>ref|XP_002304783.1| predicted protein [Populus trichocarpa] gi|222842215|gb|EEE79762.1|
            predicted protein [Populus trichocarpa]
          Length = 848

 Score =  333 bits (855), Expect = 3e-89
 Identities = 170/270 (62%), Positives = 213/270 (78%), Gaps = 1/270 (0%)
 Frame = -1

Query: 939  EKAAAVGLLGNLPVNDKRATEILKKAHLLSIIVSLLGSTTITFTPTRIRLVENVADILVR 760
            EKAAA+G++ NLPV++K++TE+LKK H L I++SL+ S   T T T+  L E++A +L+R
Sbjct: 579  EKAAAIGIVSNLPVSNKKSTEVLKKLHFLPILISLMSSGASTSTSTKTWLEESIAGVLIR 638

Query: 759  FTVPSDKKLQLLSAEQGVIPCLVKLLSIGSPVAKCRAATSLMQLSQNTQSLSHSKPSRWL 580
            FT+PSDKKLQLLSAE GVIP L+KLL+  S VAKCRAA SL QLSQN+ +L  S+ SRW 
Sbjct: 639  FTIPSDKKLQLLSAELGVIPVLLKLLASESSVAKCRAAISLAQLSQNSVALRKSRKSRWT 698

Query: 579  CISPTT-AHCEVHDGYCSIKSSFCLVKAGAITPLIQILEGKERDADEAVLCALATLLQDE 403
            C+ P+    C+VHDGYC +KS+FCLVKAGA+ PLIQILEG+ER+ADEAVL ALATLLQDE
Sbjct: 699  CMPPSADTFCQVHDGYCVVKSTFCLVKAGAVPPLIQILEGEEREADEAVLNALATLLQDE 758

Query: 402  IWEKGSNVIVKALGVHALTRVLEVGSFKAQEKALWVLERIFRLETNRVQYGEPAQVILID 223
            IWE GS+ + K   V A+ RVLE G+ KAQEKALW+LERIF +E +R Q+GE AQ +LID
Sbjct: 759  IWESGSHYMAKTSVVQAIIRVLESGTVKAQEKALWILERIFSIEEHRSQHGESAQAVLID 818

Query: 222  LAQHSAPALKSKIAKILAHLELLQMQSDYF 133
            LAQ+  P LK  +AK+LA L+LLQ QS YF
Sbjct: 819  LAQNGHPRLKPTVAKVLARLQLLQDQSSYF 848


Top