BLASTX nr result
ID: Coptis23_contig00029672
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00029672 (303 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-... 102 4e-20 emb|CBI39750.3| unnamed protein product [Vitis vinifera] 102 4e-20 ref|XP_002516324.1| hypothetical protein RCOM_1189860 [Ricinus c... 100 1e-19 ref|XP_002309929.1| predicted protein [Populus trichocarpa] gi|2... 92 6e-17 ref|XP_003601863.1| hypothetical protein MTR_3g086220 [Medicago ... 90 2e-16 >ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera] Length = 4116 Score = 102 bits (253), Expect = 4e-20 Identities = 42/82 (51%), Positives = 61/82 (74%) Frame = -3 Query: 295 VFVETSLSTHIVMGVSPHMTAGDLKRELGSEHYICFPSIGEIIINGLMVKKRSHYYRLPD 116 VF +T++ TH+ + VSP++T+GD REL H+ CFP +GEI + GLMV+++S +Y LP+ Sbjct: 9 VFTDTNMGTHVALSVSPNITSGDFMRELEKTHFNCFPELGEIRVYGLMVRRKSCFYHLPE 68 Query: 115 SVILKDVFQGFKGTWFLHVDVT 50 SV +K FQG KGTWFLH + + Sbjct: 69 SVPIKHAFQGLKGTWFLHTEAS 90 >emb|CBI39750.3| unnamed protein product [Vitis vinifera] Length = 379 Score = 102 bits (253), Expect = 4e-20 Identities = 42/82 (51%), Positives = 61/82 (74%) Frame = -3 Query: 295 VFVETSLSTHIVMGVSPHMTAGDLKRELGSEHYICFPSIGEIIINGLMVKKRSHYYRLPD 116 VF +T++ TH+ + VSP++T+GD REL H+ CFP +GEI + GLMV+++S +Y LP+ Sbjct: 9 VFTDTNMGTHVALSVSPNITSGDFMRELEKTHFNCFPELGEIRVYGLMVRRKSCFYHLPE 68 Query: 115 SVILKDVFQGFKGTWFLHVDVT 50 SV +K FQG KGTWFLH + + Sbjct: 69 SVPIKHAFQGLKGTWFLHTEAS 90 >ref|XP_002516324.1| hypothetical protein RCOM_1189860 [Ricinus communis] gi|223544554|gb|EEF46071.1| hypothetical protein RCOM_1189860 [Ricinus communis] Length = 364 Score = 100 bits (249), Expect = 1e-19 Identities = 47/89 (52%), Positives = 63/89 (70%) Frame = -3 Query: 295 VFVETSLSTHIVMGVSPHMTAGDLKRELGSEHYICFPSIGEIIINGLMVKKRSHYYRLPD 116 VF++T++ THI VSP +TA D KREL EH FP++GEI + LMV+++S +Y L + Sbjct: 9 VFIDTNIGTHIAASVSPDITAADFKRELEREHLSFFPTLGEIKAHVLMVRRKSCFYHLTE 68 Query: 115 SVILKDVFQGFKGTWFLHVDVTPSNQYDK 29 S+ +K FQG KGTWFLHV V PS+ DK Sbjct: 69 SLPIKYAFQGLKGTWFLHVKVQPSSNVDK 97 >ref|XP_002309929.1| predicted protein [Populus trichocarpa] gi|222852832|gb|EEE90379.1| predicted protein [Populus trichocarpa] Length = 435 Score = 91.7 bits (226), Expect = 6e-17 Identities = 41/90 (45%), Positives = 61/90 (67%), Gaps = 1/90 (1%) Frame = -3 Query: 301 MSVFVETSLSTHIVMGVSPHMTAGDLKRELGSEHYICFPSIGEIIINGL-MVKKRSHYYR 125 ++VF +T++ THI MG+SP +T D KREL H+ CFP +GEI + L V++ + +Y Sbjct: 10 VAVFTDTNMDTHIAMGISPDITVADFKRELEKMHFNCFPKLGEIKVCELKQVRRNNCFYH 69 Query: 124 LPDSVILKDVFQGFKGTWFLHVDVTPSNQY 35 L +S+ +K FQG KG WFLHV++ SN + Sbjct: 70 LLESLPIKYAFQGLKGNWFLHVEIRSSNSF 99 >ref|XP_003601863.1| hypothetical protein MTR_3g086220 [Medicago truncatula] gi|355490911|gb|AES72114.1| hypothetical protein MTR_3g086220 [Medicago truncatula] Length = 1188 Score = 89.7 bits (221), Expect = 2e-16 Identities = 39/82 (47%), Positives = 57/82 (69%) Frame = -3 Query: 295 VFVETSLSTHIVMGVSPHMTAGDLKRELGSEHYICFPSIGEIIINGLMVKKRSHYYRLPD 116 VF++T+L TH+ + VS H T DLK+ + SEH CFP IG+I I+G+ VK+ H+Y L D Sbjct: 12 VFIDTNLDTHLALTVSDHDTVSDLKKLIVSEHASCFPKIGQIQIHGIKVKRNGHFYHLSD 71 Query: 115 SVILKDVFQGFKGTWFLHVDVT 50 S++++ F G +WFL VDV+ Sbjct: 72 SMVVRSAFIGVNKSWFLSVDVS 93