BLASTX nr result

ID: Coptis23_contig00029672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029672
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   102   4e-20
emb|CBI39750.3| unnamed protein product [Vitis vinifera]              102   4e-20
ref|XP_002516324.1| hypothetical protein RCOM_1189860 [Ricinus c...   100   1e-19
ref|XP_002309929.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_003601863.1| hypothetical protein MTR_3g086220 [Medicago ...    90   2e-16

>ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera]
          Length = 4116

 Score =  102 bits (253), Expect = 4e-20
 Identities = 42/82 (51%), Positives = 61/82 (74%)
 Frame = -3

Query: 295 VFVETSLSTHIVMGVSPHMTAGDLKRELGSEHYICFPSIGEIIINGLMVKKRSHYYRLPD 116
           VF +T++ TH+ + VSP++T+GD  REL   H+ CFP +GEI + GLMV+++S +Y LP+
Sbjct: 9   VFTDTNMGTHVALSVSPNITSGDFMRELEKTHFNCFPELGEIRVYGLMVRRKSCFYHLPE 68

Query: 115 SVILKDVFQGFKGTWFLHVDVT 50
           SV +K  FQG KGTWFLH + +
Sbjct: 69  SVPIKHAFQGLKGTWFLHTEAS 90


>emb|CBI39750.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  102 bits (253), Expect = 4e-20
 Identities = 42/82 (51%), Positives = 61/82 (74%)
 Frame = -3

Query: 295 VFVETSLSTHIVMGVSPHMTAGDLKRELGSEHYICFPSIGEIIINGLMVKKRSHYYRLPD 116
           VF +T++ TH+ + VSP++T+GD  REL   H+ CFP +GEI + GLMV+++S +Y LP+
Sbjct: 9   VFTDTNMGTHVALSVSPNITSGDFMRELEKTHFNCFPELGEIRVYGLMVRRKSCFYHLPE 68

Query: 115 SVILKDVFQGFKGTWFLHVDVT 50
           SV +K  FQG KGTWFLH + +
Sbjct: 69  SVPIKHAFQGLKGTWFLHTEAS 90


>ref|XP_002516324.1| hypothetical protein RCOM_1189860 [Ricinus communis]
           gi|223544554|gb|EEF46071.1| hypothetical protein
           RCOM_1189860 [Ricinus communis]
          Length = 364

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/89 (52%), Positives = 63/89 (70%)
 Frame = -3

Query: 295 VFVETSLSTHIVMGVSPHMTAGDLKRELGSEHYICFPSIGEIIINGLMVKKRSHYYRLPD 116
           VF++T++ THI   VSP +TA D KREL  EH   FP++GEI  + LMV+++S +Y L +
Sbjct: 9   VFIDTNIGTHIAASVSPDITAADFKRELEREHLSFFPTLGEIKAHVLMVRRKSCFYHLTE 68

Query: 115 SVILKDVFQGFKGTWFLHVDVTPSNQYDK 29
           S+ +K  FQG KGTWFLHV V PS+  DK
Sbjct: 69  SLPIKYAFQGLKGTWFLHVKVQPSSNVDK 97


>ref|XP_002309929.1| predicted protein [Populus trichocarpa] gi|222852832|gb|EEE90379.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 41/90 (45%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
 Frame = -3

Query: 301 MSVFVETSLSTHIVMGVSPHMTAGDLKRELGSEHYICFPSIGEIIINGL-MVKKRSHYYR 125
           ++VF +T++ THI MG+SP +T  D KREL   H+ CFP +GEI +  L  V++ + +Y 
Sbjct: 10  VAVFTDTNMDTHIAMGISPDITVADFKRELEKMHFNCFPKLGEIKVCELKQVRRNNCFYH 69

Query: 124 LPDSVILKDVFQGFKGTWFLHVDVTPSNQY 35
           L +S+ +K  FQG KG WFLHV++  SN +
Sbjct: 70  LLESLPIKYAFQGLKGNWFLHVEIRSSNSF 99


>ref|XP_003601863.1| hypothetical protein MTR_3g086220 [Medicago truncatula]
           gi|355490911|gb|AES72114.1| hypothetical protein
           MTR_3g086220 [Medicago truncatula]
          Length = 1188

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 39/82 (47%), Positives = 57/82 (69%)
 Frame = -3

Query: 295 VFVETSLSTHIVMGVSPHMTAGDLKRELGSEHYICFPSIGEIIINGLMVKKRSHYYRLPD 116
           VF++T+L TH+ + VS H T  DLK+ + SEH  CFP IG+I I+G+ VK+  H+Y L D
Sbjct: 12  VFIDTNLDTHLALTVSDHDTVSDLKKLIVSEHASCFPKIGQIQIHGIKVKRNGHFYHLSD 71

Query: 115 SVILKDVFQGFKGTWFLHVDVT 50
           S++++  F G   +WFL VDV+
Sbjct: 72  SMVVRSAFIGVNKSWFLSVDVS 93


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