BLASTX nr result

ID: Coptis23_contig00029671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029671
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530179.1| Disease resistance protein RPM1, putative [R...   151   2e-34
emb|CBI24353.3| unnamed protein product [Vitis vinifera]              148   2e-33
ref|XP_002270165.1| PREDICTED: disease resistance protein At4g27...   148   2e-33
emb|CBI20163.3| unnamed protein product [Vitis vinifera]              146   8e-33
ref|XP_002283414.1| PREDICTED: probable disease resistance prote...   146   8e-33

>ref|XP_002530179.1| Disease resistance protein RPM1, putative [Ricinus communis]
           gi|223530298|gb|EEF32193.1| Disease resistance protein
           RPM1, putative [Ricinus communis]
          Length = 969

 Score =  151 bits (382), Expect = 2e-34
 Identities = 99/292 (33%), Positives = 157/292 (53%), Gaps = 4/292 (1%)
 Frame = +3

Query: 78  NSMDILRSRYQELRAKEIDIRWEVSKAVEQQ-KKPKEELIQWLENVYRVKKQVNNMEIAA 254
           + M  LR + Q+L + + D   E+  AV Q  KKP  EL  W  N+   K +V NME   
Sbjct: 25  DDMQTLRRKLQQLESIKADKVEELQTAVLQTAKKPMNELQIWSRNISMAKVKVQNMEQEV 84

Query: 255 RRQ--SETQLMNEIELIKDQVNQL-QETSHFANELYVSYEQDDDHFLERSQVLAAPTLVG 425
           ++   S   L   ++ + +++ +L  + + F   L VS   D+         L AP LV 
Sbjct: 85  KQGGLSGKLLGKRVKKMMEEMKELIDQNARFQGRL-VSDAGDNSRV-----ALLAPKLVC 138

Query: 426 KFVELNMDKIWENLTDPNVNIITVYGTRGVGKTAIMMNINNRLATTDIFQKIFWVTVSQD 605
           +  E+N +KIW+ L +     I ++G  GVGKT ++  I N L      + ++W+TVSQD
Sbjct: 139 QAFEINKEKIWQYLEEGEGFCIGIWGMGGVGKTTLLTYIYNELLRKQ--KNVYWITVSQD 196

Query: 606 FNLQNVQNDIALQLNFDLSKYEHSSRRAVRLYVKLKKINNFLIIFDDVWQPIPFEEVGIP 785
           F+++ +QN IA  ++ D+S  +   +RA  L+  L     F++I DD+W+    E VGIP
Sbjct: 197 FSVRKLQNHIAKAIDRDISIEDDEKKRAALLWNALSNKQKFVLILDDLWENFSLENVGIP 256

Query: 786 RPNRENGCKIVLTTHVNFNCPDTKPDKIIRVNLLSKNEAWNLFASKVGDKVL 941
             ++ENGCK++ T+     C      + I+V  LS+ EAWNLF  K+G+K+L
Sbjct: 257 -ISKENGCKLIFTSRSLEVCNKMDCRRKIKVEPLSEEEAWNLFQEKLGEKIL 307


>emb|CBI24353.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score =  148 bits (373), Expect = 2e-33
 Identities = 92/278 (33%), Positives = 155/278 (55%), Gaps = 8/278 (2%)
 Frame = +3

Query: 123 KEIDIRWEVSKAVEQQKKPKEELIQWLENVYRVKKQVNNME---IAARRQSETQLMNEIE 293
           +E+ +  ++   VE +     ++ +WL+ V  ++ +VN+M+    A+  +S    +N   
Sbjct: 42  EEMKLLIDLRSKVENESAWTPQVSEWLKEVEELECEVNSMQEGIAASNERSGRGFLNCSL 101

Query: 294 LIKDQVNQLQETSHFANELYVSYEQDDDHFLERS-QVLAAPTLVGKFVEL-NMDKIWENL 467
             K+ V +L++      ++  S      H L R  + +  P++  +     N+ KI   L
Sbjct: 102 HNKELVQRLKKVQRL-RKVGTSISMVAAHRLARRVEHIPGPSIECQATATQNLAKIMSLL 160

Query: 468 TDPNVNIITVYGTRGVGKTAIMMNINNRL---ATTDIFQKIFWVTVSQDFNLQNVQNDIA 638
            D  V  I V+G  GVGKT ++ N+NN+L   ++T  F  + W+TVS++ +L+ +Q  IA
Sbjct: 161 NDDGVGRIGVWGMGGVGKTTLVKNLNNKLRDASSTQSFGIVIWITVSKEMDLKRIQVQIA 220

Query: 639 LQLNFDLSKYEHSSRRAVRLYVKLKKINNFLIIFDDVWQPIPFEEVGIPRPNRENGCKIV 818
            +LN  +   E + R A++L+ +LKK N FL+IFDDVW+ I  + +G+P+P    GCKIV
Sbjct: 221 QRLNMAVDMDETTERMAIKLFHRLKKENKFLLIFDDVWKGIHLDSLGVPQPEDHVGCKIV 280

Query: 819 LTTHVNFNCPDTKPDKIIRVNLLSKNEAWNLFASKVGD 932
           LTT     C   + D  +RV++L+ +EAWNLF   VGD
Sbjct: 281 LTTRSLDVCRVMRTDVDVRVDVLNDSEAWNLFCQNVGD 318


>ref|XP_002270165.1| PREDICTED: disease resistance protein At4g27190-like [Vitis
           vinifera]
          Length = 982

 Score =  148 bits (373), Expect = 2e-33
 Identities = 92/278 (33%), Positives = 155/278 (55%), Gaps = 8/278 (2%)
 Frame = +3

Query: 123 KEIDIRWEVSKAVEQQKKPKEELIQWLENVYRVKKQVNNME---IAARRQSETQLMNEIE 293
           +E+ +  ++   VE +     ++ +WL+ V  ++ +VN+M+    A+  +S    +N   
Sbjct: 42  EEMKLLIDLRSKVENESAWTPQVSEWLKEVEELECEVNSMQEGIAASNERSGRGFLNCSL 101

Query: 294 LIKDQVNQLQETSHFANELYVSYEQDDDHFLERS-QVLAAPTLVGKFVEL-NMDKIWENL 467
             K+ V +L++      ++  S      H L R  + +  P++  +     N+ KI   L
Sbjct: 102 HNKELVQRLKKVQRL-RKVGTSISMVAAHRLARRVEHIPGPSIECQATATQNLAKIMSLL 160

Query: 468 TDPNVNIITVYGTRGVGKTAIMMNINNRL---ATTDIFQKIFWVTVSQDFNLQNVQNDIA 638
            D  V  I V+G  GVGKT ++ N+NN+L   ++T  F  + W+TVS++ +L+ +Q  IA
Sbjct: 161 NDDGVGRIGVWGMGGVGKTTLVKNLNNKLRDASSTQSFGIVIWITVSKEMDLKRIQVQIA 220

Query: 639 LQLNFDLSKYEHSSRRAVRLYVKLKKINNFLIIFDDVWQPIPFEEVGIPRPNRENGCKIV 818
            +LN  +   E + R A++L+ +LKK N FL+IFDDVW+ I  + +G+P+P    GCKIV
Sbjct: 221 QRLNMAVDMDETTERMAIKLFHRLKKENKFLLIFDDVWKGIHLDSLGVPQPEDHVGCKIV 280

Query: 819 LTTHVNFNCPDTKPDKIIRVNLLSKNEAWNLFASKVGD 932
           LTT     C   + D  +RV++L+ +EAWNLF   VGD
Sbjct: 281 LTTRSLDVCRVMRTDVDVRVDVLNDSEAWNLFCQNVGD 318


>emb|CBI20163.3| unnamed protein product [Vitis vinifera]
          Length = 984

 Score =  146 bits (368), Expect = 8e-33
 Identities = 92/278 (33%), Positives = 152/278 (54%), Gaps = 4/278 (1%)
 Frame = +3

Query: 93  LRSRYQELRAKEIDIRWEVSKAVEQQKKPKEELIQWLENVYRVKKQVNNMEIAA---RRQ 263
           L+ + + L+++E D++ E+  A  Q+KK K+E+  WL+ V  +K  +  ME      R  
Sbjct: 38  LKEKMERLKSREQDVKIELQNAQYQRKKEKKEVENWLKEVQNMKDDLERMEQEVGKGRIF 97

Query: 264 SETQLMNEIELIKDQVNQLQETSHFANELYVSYEQDDDHFLERSQVLAAPTLVGKFVELN 443
           S    + + E   ++V++L E   F   + +   +D+   L  +Q++   T      + N
Sbjct: 98  SRLGFLRQSEEHIEKVDELLERGRFPEGILIDVLRDEGRALLTTQLIGETT-----TKRN 152

Query: 444 MDKIWENLTDPNVNIITVYGTRGVGKTAIMMNINNRLATT-DIFQKIFWVTVSQDFNLQN 620
           ++KIW  L    +  I V+G  G+GKT I+ +I+N L    D F  ++WVTVS+D +++ 
Sbjct: 153 LEKIWTCLEKGEIQSIGVWGMGGIGKTTIVTHIHNLLLEKKDTFGLVYWVTVSKDSSVRK 212

Query: 621 VQNDIALQLNFDLSKYEHSSRRAVRLYVKLKKINNFLIIFDDVWQPIPFEEVGIPRPNRE 800
           +Q+ IA ++N DLSK E    R+  L+  L+K   F++IFDDVW+  P  EVGIP    +
Sbjct: 213 LQDVIAEKINLDLSKEEDERLRSALLFEALQKEKKFVLIFDDVWEVYPPREVGIP-IGVD 271

Query: 801 NGCKIVLTTHVNFNCPDTKPDKIIRVNLLSKNEAWNLF 914
            G K+++TT     C      +II+V  L + EAW LF
Sbjct: 272 RG-KLIITTRSREVCLKMGCKEIIKVEPLYEEEAWELF 308


>ref|XP_002283414.1| PREDICTED: probable disease resistance protein At4g27220-like
           [Vitis vinifera]
          Length = 1016

 Score =  146 bits (368), Expect = 8e-33
 Identities = 92/278 (33%), Positives = 152/278 (54%), Gaps = 4/278 (1%)
 Frame = +3

Query: 93  LRSRYQELRAKEIDIRWEVSKAVEQQKKPKEELIQWLENVYRVKKQVNNMEIAA---RRQ 263
           L+ + + L+++E D++ E+  A  Q+KK K+E+  WL+ V  +K  +  ME      R  
Sbjct: 38  LKEKMERLKSREQDVKIELQNAQYQRKKEKKEVENWLKEVQNMKDDLERMEQEVGKGRIF 97

Query: 264 SETQLMNEIELIKDQVNQLQETSHFANELYVSYEQDDDHFLERSQVLAAPTLVGKFVELN 443
           S    + + E   ++V++L E   F   + +   +D+   L  +Q++   T      + N
Sbjct: 98  SRLGFLRQSEEHIEKVDELLERGRFPEGILIDVLRDEGRALLTTQLIGETT-----TKRN 152

Query: 444 MDKIWENLTDPNVNIITVYGTRGVGKTAIMMNINNRLATT-DIFQKIFWVTVSQDFNLQN 620
           ++KIW  L    +  I V+G  G+GKT I+ +I+N L    D F  ++WVTVS+D +++ 
Sbjct: 153 LEKIWTCLEKGEIQSIGVWGMGGIGKTTIVTHIHNLLLEKKDTFGLVYWVTVSKDSSVRK 212

Query: 621 VQNDIALQLNFDLSKYEHSSRRAVRLYVKLKKINNFLIIFDDVWQPIPFEEVGIPRPNRE 800
           +Q+ IA ++N DLSK E    R+  L+  L+K   F++IFDDVW+  P  EVGIP    +
Sbjct: 213 LQDVIAEKINLDLSKEEDERLRSALLFEALQKEKKFVLIFDDVWEVYPPREVGIP-IGVD 271

Query: 801 NGCKIVLTTHVNFNCPDTKPDKIIRVNLLSKNEAWNLF 914
            G K+++TT     C      +II+V  L + EAW LF
Sbjct: 272 RG-KLIITTRSREVCLKMGCKEIIKVEPLYEEEAWELF 308


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