BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029665
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
ref|XP_002517612.1| pentatricopeptide repeat-containing protein,...   117   1e-24
dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]                         115   3e-24
ref|XP_002326537.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20

>ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  123 bits (308), Expect = 2e-26
 Identities = 54/91 (59%), Positives = 69/91 (75%)
 Frame = +1

Query: 1   DRWDPRTAAYNAILTCLCQHSMLKAAFELRDKVMGKGFVPDSVTFAALLHGICLEERSGE 180
           D W PR+AAYN+IL CLCQ+ M + A +L +K+  KG +PDSV+F ALLHG+CLE RS E
Sbjct: 702 DGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKE 761

Query: 181 WKKFFHCNLNKQELQVAVGYSVLLDQYIHNG 273
           WK    CNLN++ELQ+AV YS +LDQY+  G
Sbjct: 762 WKNIVSCNLNERELQIAVNYSSILDQYLPQG 792


>ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543244|gb|EEF44776.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 794

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/91 (58%), Positives = 65/91 (71%)
 Frame = +1

Query: 1   DRWDPRTAAYNAILTCLCQHSMLKAAFELRDKVMGKGFVPDSVTFAALLHGICLEERSGE 180
           D WD R A+YN+IL CLCQH M+K A  LRDK+M KGF+PD V+  ALLHG+CLE RS +
Sbjct: 668 DGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQD 727

Query: 181 WKKFFHCNLNKQELQVAVGYSVLLDQYIHNG 273
           W     C LN++ELQVAV YS  LD ++  G
Sbjct: 728 WNNVISCKLNERELQVAVKYSEKLDAFLSQG 758


>dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  115 bits (289), Expect = 3e-24
 Identities = 52/91 (57%), Positives = 65/91 (71%)
 Frame = +1

Query: 1   DRWDPRTAAYNAILTCLCQHSMLKAAFELRDKVMGKGFVPDSVTFAALLHGICLEERSGE 180
           D WD R AAYN+IL CLCQH M+K A +L DK+M KGF PD V+F ALLHG+CLE R  +
Sbjct: 697 DGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQD 756

Query: 181 WKKFFHCNLNKQELQVAVGYSVLLDQYIHNG 273
           W     CN N+++LQ+AV YS  LDQ++  G
Sbjct: 757 WNNVIPCNFNERQLQIAVKYSEKLDQFLSEG 787


>ref|XP_002326537.1| predicted protein [Populus trichocarpa] gi|222833859|gb|EEE72336.1|
           predicted protein [Populus trichocarpa]
          Length = 826

 Score =  112 bits (279), Expect = 4e-23
 Identities = 50/91 (54%), Positives = 65/91 (71%)
 Frame = +1

Query: 1   DRWDPRTAAYNAILTCLCQHSMLKAAFELRDKVMGKGFVPDSVTFAALLHGICLEERSGE 180
           D W+ R AAYN++L CLC H M+ AA +LRDK+ GKG  PD V+FAAL++G+CLE RS E
Sbjct: 703 DGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKE 762

Query: 181 WKKFFHCNLNKQELQVAVGYSVLLDQYIHNG 273
           WK    C LN+ ELQ+AV YS  L+ ++  G
Sbjct: 763 WKNTISCKLNEWELQIAVKYSQKLNPFLPKG 793


>ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
           gi|449484425|ref|XP_004156880.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  103 bits (256), Expect = 2e-20
 Identities = 46/91 (50%), Positives = 63/91 (69%)
 Frame = +1

Query: 1   DRWDPRTAAYNAILTCLCQHSMLKAAFELRDKVMGKGFVPDSVTFAALLHGICLEERSGE 180
           D W  + AAYN IL CLCQ  M+K A +LR+K++  G   D+V+F AL+HGICLE  S E
Sbjct: 706 DGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKE 765

Query: 181 WKKFFHCNLNKQELQVAVGYSVLLDQYIHNG 273
           W+    C+LN+ ELQ+A+ YS+ LD++I  G
Sbjct: 766 WRNMISCDLNEGELQIALKYSLELDKFIPEG 796