BLASTX nr result
ID: Coptis23_contig00029658
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00029658
(316 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002870459.1| polyubiquitin [Arabidopsis lyrata subsp. lyr... 130 1e-28
ref|XP_002891806.1| predicted protein [Arabidopsis lyrata subsp.... 128 4e-28
gb|ABK94002.1| unknown [Populus trichocarpa] 128 4e-28
ref|XP_002326346.1| predicted protein [Populus trichocarpa] gi|2... 127 7e-28
gb|AAC35858.1| polyubiquitin [Capsicum chinense] 127 1e-27
>ref|XP_002870459.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
gi|297316295|gb|EFH46718.1| polyubiquitin [Arabidopsis
lyrata subsp. lyrata]
Length = 537
Score = 130 bits (326), Expect = 1e-28
Identities = 76/126 (60%), Positives = 87/126 (69%), Gaps = 22/126 (17%)
Frame = -2
Query: 315 IDNVKAIIPYKEEISADHN-------QLEIGRTEADNNVKQDSSLHL------------- 196
IDNVKA I KEEI AD QLE GRT AD N++++S+LHL
Sbjct: 330 IDNVKAKIQDKEEIPADQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVK 389
Query: 195 --TGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNEST 22
TG TITLEVESSDTI+ +K IQDKEGIPP++Q+LIFAGKQL DGRTLADY+I EST
Sbjct: 390 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 449
Query: 21 LHLDLR 4
LHL LR
Sbjct: 450 LHLVLR 455
Score = 127 bits (318), Expect = 1e-27
Identities = 75/126 (59%), Positives = 85/126 (67%), Gaps = 22/126 (17%)
Frame = -2
Query: 315 IDNVKAIIPYKEEISADHN-------QLEIGRTEADNNVKQDSSLHL------------- 196
IDNVKA I KE I D QLE GRT AD N++++S+LHL
Sbjct: 178 IDNVKAKIEDKEGIPTDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 237
Query: 195 --TGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNEST 22
TG TITLEVESSDTI+ LK IQDKEGIPP++Q+LIFAGKQL DGRTLADY+I EST
Sbjct: 238 TLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 297
Query: 21 LHLDLR 4
LHL LR
Sbjct: 298 LHLVLR 303
Score = 122 bits (305), Expect = 4e-26
Identities = 73/126 (57%), Positives = 84/126 (66%), Gaps = 22/126 (17%)
Frame = -2
Query: 315 IDNVKAIIPYKEEISADHN-------QLEIGRTEADNNVKQDSSLHL------------- 196
IDNVKA I KE I D QLE GRT AD N++++S+LHL
Sbjct: 406 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 465
Query: 195 --TGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNEST 22
TG TITLEVESSDTI+ +K IQDKEGI P++Q+LIFAGKQL DGRTLADY+I EST
Sbjct: 466 TLTGKTITLEVESSDTIDNVKAKIQDKEGIVPDQQRLIFAGKQLEDGRTLADYNIQKEST 525
Query: 21 LHLDLR 4
LHL LR
Sbjct: 526 LHLVLR 531
Score = 120 bits (302), Expect = 9e-26
Identities = 72/126 (57%), Positives = 84/126 (66%), Gaps = 22/126 (17%)
Frame = -2
Query: 315 IDNVKAIIPYKEEISADHN-------QLEIGRTEADNNVKQDSSLHL------------- 196
IDNVKA I KE I D QLE GRT AD N++++S+LHL
Sbjct: 102 IDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 161
Query: 195 --TGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNEST 22
TG TITLEVESSDTI+ +K I+DKEGIP ++Q+LIFAGKQL DGRTLADY+I EST
Sbjct: 162 TLTGKTITLEVESSDTIDNVKAKIEDKEGIPTDQQRLIFAGKQLEDGRTLADYNIQKEST 221
Query: 21 LHLDLR 4
LHL LR
Sbjct: 222 LHLVLR 227
Score = 118 bits (296), Expect = 4e-25
Identities = 72/126 (57%), Positives = 83/126 (65%), Gaps = 22/126 (17%)
Frame = -2
Query: 315 IDNVKAIIPYKEEISADHN-------QLEIGRTEADNNVKQDSSLHL------------- 196
I+NVKA I KE I D QLE GRT AD N++++S LHL
Sbjct: 26 INNVKAQIQDKEGIPLDQQRLIFAGKQLEDGRTLADYNIQKESILHLALRLRGGMQIFVK 85
Query: 195 --TGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNEST 22
TG TITLEVESSDTI+ +K IQDKEGI P++Q+LIFAGKQL DGRTLADY+I EST
Sbjct: 86 TLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKEST 145
Query: 21 LHLDLR 4
LHL LR
Sbjct: 146 LHLVLR 151
Score = 118 bits (295), Expect = 6e-25
Identities = 71/126 (56%), Positives = 83/126 (65%), Gaps = 22/126 (17%)
Frame = -2
Query: 315 IDNVKAIIPYKEEISADHN-------QLEIGRTEADNNVKQDSSLHL------------- 196
IDN+KA I KE I D QLE GRT AD N++++S+LHL
Sbjct: 254 IDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 313
Query: 195 --TGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNEST 22
TG TITLEVESSDTI+ +K IQDKE IP ++Q+LIFAGKQL DGRTLADY+I EST
Sbjct: 314 TLTGRTITLEVESSDTIDNVKAKIQDKEEIPADQQRLIFAGKQLEDGRTLADYNIQKEST 373
Query: 21 LHLDLR 4
LHL LR
Sbjct: 374 LHLVLR 379
Score = 89.4 bits (220), Expect = 3e-16
Identities = 46/65 (70%), Positives = 52/65 (80%)
Frame = -2
Query: 198 LTGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNESTL 19
LT TITL+ ESS TIN +K IQDKEGIP ++Q+LIFAGKQL DGRTLADY+I ES L
Sbjct: 11 LTEKTITLDAESSYTINNVKAQIQDKEGIPLDQQRLIFAGKQLEDGRTLADYNIQKESIL 70
Query: 18 HLDLR 4
HL LR
Sbjct: 71 HLALR 75
>ref|XP_002891806.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337648|gb|EFH68065.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 384
Score = 128 bits (322), Expect = 4e-28
Identities = 76/126 (60%), Positives = 86/126 (68%), Gaps = 22/126 (17%)
Frame = -2
Query: 315 IDNVKAIIPYKEEISADHN-------QLEIGRTEADNNVKQDSSLHL------------- 196
IDNVKA I KE I D QLE GRT AD N++++S+LHL
Sbjct: 177 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 236
Query: 195 --TGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNEST 22
TG TITLEVESSDTI+ LKT IQDKEGIPP++Q+LIFAGKQL DGRTLADY+I EST
Sbjct: 237 TLTGKTITLEVESSDTIDNLKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 296
Query: 21 LHLDLR 4
LHL LR
Sbjct: 297 LHLVLR 302
Score = 125 bits (314), Expect = 4e-27
Identities = 74/126 (58%), Positives = 85/126 (67%), Gaps = 22/126 (17%)
Frame = -2
Query: 315 IDNVKAIIPYKEEISADHN-------QLEIGRTEADNNVKQDSSLHL------------- 196
IDNVKA I KE I D QLE GRT AD N++++S+LHL
Sbjct: 101 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 160
Query: 195 --TGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNEST 22
TG TITLEVESSDTI+ +K IQDKEGIPP++Q+LIFAGKQL DGRTLADY+I EST
Sbjct: 161 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 220
Query: 21 LHLDLR 4
LHL LR
Sbjct: 221 LHLVLR 226
Score = 122 bits (307), Expect = 2e-26
Identities = 72/126 (57%), Positives = 84/126 (66%), Gaps = 22/126 (17%)
Frame = -2
Query: 315 IDNVKAIIPYKEEISADHN-------QLEIGRTEADNNVKQDSSLHL------------- 196
IDN+K I KE I D QLE GRT AD N++++S+LHL
Sbjct: 253 IDNLKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 312
Query: 195 --TGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNEST 22
TG TITLEVESSDTI+ +K IQDKEGIPP++Q+LIFAGKQL DGRTLADY+I EST
Sbjct: 313 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 372
Query: 21 LHLDLR 4
LHL LR
Sbjct: 373 LHLVLR 378
Score = 114 bits (286), Expect = 6e-24
Identities = 69/126 (54%), Positives = 83/126 (65%), Gaps = 22/126 (17%)
Frame = -2
Query: 315 IDNVKAIIPYKEEISADHNQL-------EIGRTEADNNVKQDSSLHL------------- 196
I+NVKA I E I D +L + GRT AD +++++S LHL
Sbjct: 25 INNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKESILHLALRLRGGMQIFIK 84
Query: 195 --TGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNEST 22
TG TITLEVESSDTI+ +K IQDKEGIPP++Q+LIFAGKQL DGRTLADY+I EST
Sbjct: 85 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 144
Query: 21 LHLDLR 4
LHL LR
Sbjct: 145 LHLVLR 150
Score = 86.7 bits (213), Expect = 2e-15
Identities = 45/65 (69%), Positives = 51/65 (78%)
Frame = -2
Query: 198 LTGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNESTL 19
LT TITL+VESSDTIN +K IQD EGIP ++Q+LIF+GK L DGRTLADY I ES L
Sbjct: 10 LTEKTITLDVESSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKESIL 69
Query: 18 HLDLR 4
HL LR
Sbjct: 70 HLALR 74
>gb|ABK94002.1| unknown [Populus trichocarpa]
Length = 305
Score = 128 bits (322), Expect = 4e-28
Identities = 75/126 (59%), Positives = 86/126 (68%), Gaps = 22/126 (17%)
Frame = -2
Query: 315 IDNVKAIIPYKEEISADHN-------QLEIGRTEADNNVKQDSSLHL------------- 196
IDNVKA I KE I D QLE GRT ADNN++++S+LHL
Sbjct: 23 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADNNIQKESTLHLVLRLRGGMQIFVK 82
Query: 195 --TGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNEST 22
TG TITLEVESSDTI+ +K IQDKEGIPP++Q+LIFAGKQL DGRTLADY+I EST
Sbjct: 83 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 142
Query: 21 LHLDLR 4
LHL LR
Sbjct: 143 LHLVLR 148
Score = 125 bits (314), Expect = 4e-27
Identities = 74/126 (58%), Positives = 85/126 (67%), Gaps = 22/126 (17%)
Frame = -2
Query: 315 IDNVKAIIPYKEEISADHN-------QLEIGRTEADNNVKQDSSLHL------------- 196
IDNVKA I KE I D QLE GRT AD N++++S+LHL
Sbjct: 99 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 158
Query: 195 --TGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNEST 22
TG TITLEVESSDTI+ +K IQDKEGIPP++Q+LIFAGKQL DGRTLADY+I EST
Sbjct: 159 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 218
Query: 21 LHLDLR 4
LHL LR
Sbjct: 219 LHLVLR 224
Score = 125 bits (314), Expect = 4e-27
Identities = 74/126 (58%), Positives = 85/126 (67%), Gaps = 22/126 (17%)
Frame = -2
Query: 315 IDNVKAIIPYKEEISADHN-------QLEIGRTEADNNVKQDSSLHL------------- 196
IDNVKA I KE I D QLE GRT AD N++++S+LHL
Sbjct: 175 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 234
Query: 195 --TGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNEST 22
TG TITLEVESSDTI+ +K IQDKEGIPP++Q+LIFAGKQL DGRTLADY+I EST
Sbjct: 235 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 294
Query: 21 LHLDLR 4
LHL LR
Sbjct: 295 LHLVLR 300
Score = 99.0 bits (245), Expect = 4e-19
Identities = 50/65 (76%), Positives = 56/65 (86%)
Frame = -2
Query: 198 LTGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNESTL 19
LTG TITLEVESSDTI+ +K IQDKEGIPP++Q+LIFAGKQL DGRTLAD +I ESTL
Sbjct: 8 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADNNIQKESTL 67
Query: 18 HLDLR 4
HL LR
Sbjct: 68 HLVLR 72
>ref|XP_002326346.1| predicted protein [Populus trichocarpa] gi|222833539|gb|EEE72016.1|
predicted protein [Populus trichocarpa]
Length = 306
Score = 127 bits (320), Expect = 7e-28
Identities = 75/126 (59%), Positives = 86/126 (68%), Gaps = 22/126 (17%)
Frame = -2
Query: 315 IDNVKAIIPYKEEISADHN-------QLEIGRTEADNNVKQDSSLHL------------- 196
IDNVKA I KE I D QLE GRT AD N++++S+LHL
Sbjct: 99 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 158
Query: 195 --TGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNEST 22
TGNTITLEVESSDTI+ +K IQDKEGIPP++Q+LIFAGKQL DGRTLADY+I EST
Sbjct: 159 TLTGNTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 218
Query: 21 LHLDLR 4
LHL LR
Sbjct: 219 LHLVLR 224
Score = 125 bits (314), Expect = 4e-27
Identities = 74/126 (58%), Positives = 85/126 (67%), Gaps = 22/126 (17%)
Frame = -2
Query: 315 IDNVKAIIPYKEEISADHN-------QLEIGRTEADNNVKQDSSLHL------------- 196
IDNVKA I KE I D QLE GRT AD N++++S+LHL
Sbjct: 175 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 234
Query: 195 --TGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNEST 22
TG TITLEVESSDTI+ +K IQDKEGIPP++Q+LIFAGKQL DGRTLADY+I EST
Sbjct: 235 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 294
Query: 21 LHLDLR 4
LHL LR
Sbjct: 295 LHLVLR 300
Score = 124 bits (310), Expect = 1e-26
Identities = 73/126 (57%), Positives = 84/126 (66%), Gaps = 22/126 (17%)
Frame = -2
Query: 315 IDNVKAIIPYKEEISADHN-------QLEIGRTEADNNVKQDSSLHL------------- 196
IDNVK I KE I D QLE GRT AD N++++S+LHL
Sbjct: 23 IDNVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 82
Query: 195 --TGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNEST 22
TG TITLEVESSDTI+ +K IQDKEGIPP++Q+LIFAGKQL DGRTLADY+I EST
Sbjct: 83 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 142
Query: 21 LHLDLR 4
LHL LR
Sbjct: 143 LHLVLR 148
Score = 101 bits (251), Expect = 7e-20
Identities = 50/65 (76%), Positives = 57/65 (87%)
Frame = -2
Query: 198 LTGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNESTL 19
LTG TITLEVE+SDTI+ +K IQDKEGIPP++Q+LIFAGKQL DGRTLADY+I ESTL
Sbjct: 8 LTGKTITLEVENSDTIDNVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTL 67
Query: 18 HLDLR 4
HL LR
Sbjct: 68 HLVLR 72
>gb|AAC35858.1| polyubiquitin [Capsicum chinense]
Length = 265
Score = 127 bits (319), Expect = 1e-27
Identities = 75/126 (59%), Positives = 86/126 (68%), Gaps = 22/126 (17%)
Frame = -2
Query: 315 IDNVKAIIPYKEEISADHN-------QLEIGRTEADNNVKQDSSLHL------------- 196
IDNVKA I KE I D QLE GRT AD N++++S+LHL
Sbjct: 135 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 194
Query: 195 --TGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNEST 22
TG TITLEVESSDTI+ +KT IQDKEGIPP++Q+LIFAGKQL DGRTLADY+I EST
Sbjct: 195 TLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 254
Query: 21 LHLDLR 4
LHL LR
Sbjct: 255 LHLVLR 260
Score = 125 bits (314), Expect = 4e-27
Identities = 74/126 (58%), Positives = 85/126 (67%), Gaps = 22/126 (17%)
Frame = -2
Query: 315 IDNVKAIIPYKEEISADHN-------QLEIGRTEADNNVKQDSSLHL------------- 196
IDNVKA I KE I D QLE GRT AD N++++S+LHL
Sbjct: 59 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 118
Query: 195 --TGNTITLEVESSDTINRLKTLIQDKEGIPPEKQKLIFAGKQLVDGRTLADYDIHNEST 22
TG TITLEVESSDTI+ +K IQDKEGIPP++Q+LIFAGKQL DGRTLADY+I EST
Sbjct: 119 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 178
Query: 21 LHLDLR 4
LHL LR
Sbjct: 179 LHLVLR 184
Score = 116 bits (290), Expect = 2e-24
Identities = 63/100 (63%), Positives = 74/100 (74%), Gaps = 15/100 (15%)
Frame = -2
Query: 258 QLEIGRTEADNNVKQDSSLHL---------------TGNTITLEVESSDTINRLKTLIQD 124
QLE GRT AD N++++S+LHL TG TITLEVESSDTI+ +K IQD
Sbjct: 9 QLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQD 68
Query: 123 KEGIPPEKQKLIFAGKQLVDGRTLADYDIHNESTLHLDLR 4
KEGIPP++Q+LIFAGKQL DGRTLADY+I ESTLHL LR
Sbjct: 69 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 108