BLASTX nr result

ID: Coptis23_contig00029655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029655
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537895.1| PREDICTED: UPF0496 protein At4g34320-like [G...   137   7e-31
ref|XP_003541076.1| PREDICTED: UPF0496 protein At4g34320-like [G...   137   9e-31
ref|XP_002281050.1| PREDICTED: UPF0496 protein At4g34320-like [V...   133   2e-29
emb|CBI32550.3| unnamed protein product [Vitis vinifera]              132   4e-29
ref|XP_002313064.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28

>ref|XP_003537895.1| PREDICTED: UPF0496 protein At4g34320-like [Glycine max]
          Length = 374

 Score =  137 bits (346), Expect = 7e-31
 Identities = 70/108 (64%), Positives = 80/108 (74%)
 Frame = +3

Query: 3   ICSIXXXXXXXXXXXXXXXXXTSIPVGSMGKWFDSLWKKYEDALKGQKDVIRTMQAGTYI 182
           ICS+                 TSIP+GSMGKW DSLW+ YE+ALKGQK+VI +MQAGTY+
Sbjct: 231 ICSVVAAAIAAPPVAAAIAAATSIPIGSMGKWIDSLWRNYENALKGQKEVISSMQAGTYV 290

Query: 183 AIKDLDGIRVLVDRLEIEIESLLQNADFVLKEDEAVKFGIEEIKKNLG 326
           AIKDLD IRVL+DRLEIEIESLL N DF + E+EAVK  IEEIKK LG
Sbjct: 291 AIKDLDNIRVLIDRLEIEIESLLHNVDFAI-EEEAVKVAIEEIKKKLG 337


>ref|XP_003541076.1| PREDICTED: UPF0496 protein At4g34320-like [Glycine max]
          Length = 373

 Score =  137 bits (345), Expect = 9e-31
 Identities = 69/108 (63%), Positives = 80/108 (74%)
 Frame = +3

Query: 3   ICSIXXXXXXXXXXXXXXXXXTSIPVGSMGKWFDSLWKKYEDALKGQKDVIRTMQAGTYI 182
           ICS+                 TSIP+GSMGKW DSLW+ YE+ALKGQK+VI +MQAGTY+
Sbjct: 230 ICSVVAAAIAAPPVAAAIAAATSIPIGSMGKWIDSLWRNYENALKGQKEVISSMQAGTYV 289

Query: 183 AIKDLDGIRVLVDRLEIEIESLLQNADFVLKEDEAVKFGIEEIKKNLG 326
           AIKDLD IR+L+DRLEIEIESLL N DF + E+EAVK  IEEIKK LG
Sbjct: 290 AIKDLDNIRILIDRLEIEIESLLHNVDFAI-EEEAVKVAIEEIKKKLG 336


>ref|XP_002281050.1| PREDICTED: UPF0496 protein At4g34320-like [Vitis vinifera]
          Length = 373

 Score =  133 bits (334), Expect = 2e-29
 Identities = 69/108 (63%), Positives = 80/108 (74%)
 Frame = +3

Query: 3   ICSIXXXXXXXXXXXXXXXXXTSIPVGSMGKWFDSLWKKYEDALKGQKDVIRTMQAGTYI 182
           ICS+                  S+P+G+MGKW DSL K YE+ALKGQK+VI +MQ GTY+
Sbjct: 230 ICSVVAAAMAAPPVAAALAAAASLPLGTMGKWIDSLLKNYENALKGQKEVISSMQVGTYV 289

Query: 183 AIKDLDGIRVLVDRLEIEIESLLQNADFVLKEDEAVKFGIEEIKKNLG 326
           AIKDLD IRVL+DRLEIEIESLLQ  D+V+KE EAVKFGIEEIKK LG
Sbjct: 290 AIKDLDTIRVLIDRLEIEIESLLQTTDYVIKE-EAVKFGIEEIKKKLG 336


>emb|CBI32550.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score =  132 bits (331), Expect = 4e-29
 Identities = 66/86 (76%), Positives = 76/86 (88%)
 Frame = +3

Query: 69  SIPVGSMGKWFDSLWKKYEDALKGQKDVIRTMQAGTYIAIKDLDGIRVLVDRLEIEIESL 248
           S+P+G+MGKW DSL K YE+ALKGQK+VI +MQ GTY+AIKDLD IRVL+DRLEIEIESL
Sbjct: 77  SLPLGTMGKWIDSLLKNYENALKGQKEVISSMQVGTYVAIKDLDTIRVLIDRLEIEIESL 136

Query: 249 LQNADFVLKEDEAVKFGIEEIKKNLG 326
           LQ  D+V+KE EAVKFGIEEIKK LG
Sbjct: 137 LQTTDYVIKE-EAVKFGIEEIKKKLG 161


>ref|XP_002313064.1| predicted protein [Populus trichocarpa] gi|222849472|gb|EEE87019.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/108 (60%), Positives = 78/108 (72%)
 Frame = +3

Query: 3   ICSIXXXXXXXXXXXXXXXXXTSIPVGSMGKWFDSLWKKYEDALKGQKDVIRTMQAGTYI 182
           ICS+                 +SIP+GSMGKW DS+WK YE+ALKGQK+VI TMQ GTY+
Sbjct: 231 ICSVVAAAMAAPPVAAALAAASSIPLGSMGKWIDSMWKNYENALKGQKEVISTMQVGTYV 290

Query: 183 AIKDLDGIRVLVDRLEIEIESLLQNADFVLKEDEAVKFGIEEIKKNLG 326
           AIKDLD IRVL++RLEIEIE+L+Q  DF ++ D AVK  IEEIKK LG
Sbjct: 291 AIKDLDTIRVLINRLEIEIEALMQTTDFAIEHD-AVKLAIEEIKKKLG 337


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