BLASTX nr result

ID: Coptis23_contig00029654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029654
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236329.1| uncharacterized protein LOC100500321 [Glycin...   101   7e-20
ref|XP_002893120.1| hypothetical protein ARALYDRAFT_889509 [Arab...   100   9e-20
ref|XP_003529363.1| PREDICTED: dolichol-phosphate mannosyltransf...   100   2e-19
gb|ACN40933.1| unknown [Picea sitchensis]                             100   2e-19
ref|XP_002307788.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19

>ref|NP_001236329.1| uncharacterized protein LOC100500321 [Glycine max]
           gi|255630016|gb|ACU15360.1| unknown [Glycine max]
          Length = 222

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/70 (72%), Positives = 53/70 (75%)
 Frame = +3

Query: 3   PSFIRKQRETSASIXXXXXXXXXXXXXXWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR 182
           PSFIRKQ ET A I              WNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR
Sbjct: 99  PSFIRKQSETGADIVTGTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR 158

Query: 183 LYRKSVLQDV 212
           LYRKSVL+D+
Sbjct: 159 LYRKSVLEDI 168


>ref|XP_002893120.1| hypothetical protein ARALYDRAFT_889509 [Arabidopsis lyrata subsp.
           lyrata] gi|297338962|gb|EFH69379.1| hypothetical protein
           ARALYDRAFT_889509 [Arabidopsis lyrata subsp. lyrata]
          Length = 246

 Score =  100 bits (250), Expect = 9e-20
 Identities = 51/70 (72%), Positives = 55/70 (78%)
 Frame = +3

Query: 3   PSFIRKQRETSASIXXXXXXXXXXXXXXWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR 182
           PSFI+KQ ET+ASI              WNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR
Sbjct: 115 PSFIKKQLETNASIVTGTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR 174

Query: 183 LYRKSVLQDV 212
           LY+KSVL+DV
Sbjct: 175 LYKKSVLEDV 184


>ref|XP_003529363.1| PREDICTED: dolichol-phosphate mannosyltransferase-like [Glycine
           max]
          Length = 243

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/70 (71%), Positives = 53/70 (75%)
 Frame = +3

Query: 3   PSFIRKQRETSASIXXXXXXXXXXXXXXWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR 182
           P+FIRKQ ET A I              WNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR
Sbjct: 112 PNFIRKQSETGADIVTGTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR 171

Query: 183 LYRKSVLQDV 212
           LYRKSVL+D+
Sbjct: 172 LYRKSVLEDI 181


>gb|ACN40933.1| unknown [Picea sitchensis]
          Length = 245

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/70 (72%), Positives = 54/70 (77%)
 Frame = +3

Query: 3   PSFIRKQRETSASIXXXXXXXXXXXXXXWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR 182
           PSFIRKQ ETSA I              WNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR
Sbjct: 114 PSFIRKQIETSADIVTGTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR 173

Query: 183 LYRKSVLQDV 212
           LYRK+VL+D+
Sbjct: 174 LYRKTVLEDL 183


>ref|XP_002307788.1| predicted protein [Populus trichocarpa] gi|222857237|gb|EEE94784.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/70 (71%), Positives = 54/70 (77%)
 Frame = +3

Query: 3   PSFIRKQRETSASIXXXXXXXXXXXXXXWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR 182
           PSFI+KQ ET ASI              WNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR
Sbjct: 107 PSFIKKQLETGASIVTGTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR 166

Query: 183 LYRKSVLQDV 212
           LY+KSVL+D+
Sbjct: 167 LYKKSVLEDI 176


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