BLASTX nr result

ID: Coptis23_contig00029639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029639
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516882.1| glutaredoxin, grx, putative [Ricinus communi...   156   2e-36
ref|XP_002328572.1| glutaredoxin [Populus trichocarpa] gi|222838...   155   3e-36
ref|XP_002275412.1| PREDICTED: monothiol glutaredoxin-S10 [Vitis...   154   9e-36
gb|ABF69994.1| glutaredoxin family protein [Musa acuminata]           150   2e-34
ref|XP_003529587.1| PREDICTED: monothiol glutaredoxin-S10-like [...   148   5e-34

>ref|XP_002516882.1| glutaredoxin, grx, putative [Ricinus communis]
           gi|223543970|gb|EEF45496.1| glutaredoxin, grx, putative
           [Ricinus communis]
          Length = 102

 Score =  156 bits (395), Expect = 2e-36
 Identities = 76/102 (74%), Positives = 87/102 (85%)
 Frame = -3

Query: 409 MDKVMKLASKTAVVIFSKSSCCMCHAIKSLFYDLGVSPAICELDEEPNGREMEKALQRLG 230
           MD+V KLAS+ AVVIFSKSSCCMCHAIK LFY+ GVSPAI ELDE+  G EME AL RLG
Sbjct: 1   MDRVAKLASQKAVVIFSKSSCCMCHAIKRLFYEQGVSPAIYELDEDSRGTEMEWALMRLG 60

Query: 229 CNPSVPAVYIGGQLVNSTNTIMSLHLSGSLVPMLREAGAIWL 104
           CNPSVPAV+IGG+ V S NTIM+LHL+GSL  +L+EAGA+WL
Sbjct: 61  CNPSVPAVFIGGKFVGSANTIMTLHLNGSLKKLLKEAGALWL 102


>ref|XP_002328572.1| glutaredoxin [Populus trichocarpa] gi|222838554|gb|EEE76919.1|
           glutaredoxin [Populus trichocarpa]
          Length = 102

 Score =  155 bits (393), Expect = 3e-36
 Identities = 75/102 (73%), Positives = 87/102 (85%)
 Frame = -3

Query: 409 MDKVMKLASKTAVVIFSKSSCCMCHAIKSLFYDLGVSPAICELDEEPNGREMEKALQRLG 230
           MD+V KLAS+ AVVIFSKSSCCMCHAIK LFYD GVSPAI ELDE+  G+EME AL RLG
Sbjct: 1   MDRVAKLASQKAVVIFSKSSCCMCHAIKRLFYDQGVSPAIYELDEDSRGKEMEWALMRLG 60

Query: 229 CNPSVPAVYIGGQLVNSTNTIMSLHLSGSLVPMLREAGAIWL 104
           CNPSVPAV+IGG+ V S NT+M+L L+GSL  +L+EAGA+WL
Sbjct: 61  CNPSVPAVFIGGKFVGSANTVMTLQLNGSLKKLLKEAGALWL 102


>ref|XP_002275412.1| PREDICTED: monothiol glutaredoxin-S10 [Vitis vinifera]
           gi|297736900|emb|CBI26101.3| unnamed protein product
           [Vitis vinifera]
          Length = 102

 Score =  154 bits (389), Expect = 9e-36
 Identities = 76/102 (74%), Positives = 87/102 (85%)
 Frame = -3

Query: 409 MDKVMKLASKTAVVIFSKSSCCMCHAIKSLFYDLGVSPAICELDEEPNGREMEKALQRLG 230
           MD+V KLAS+ AVVIFSKSSCCM HAIK LFY+ GVSPAI ELDE+  G+EME AL RLG
Sbjct: 1   MDRVGKLASQKAVVIFSKSSCCMSHAIKRLFYEQGVSPAIHELDEDSRGKEMEWALMRLG 60

Query: 229 CNPSVPAVYIGGQLVNSTNTIMSLHLSGSLVPMLREAGAIWL 104
           CNPSVPAV+IGG+ V S NT+M+LHL+GSL  ML+EAGAIWL
Sbjct: 61  CNPSVPAVFIGGKFVGSANTVMTLHLNGSLKKMLKEAGAIWL 102


>gb|ABF69994.1| glutaredoxin family protein [Musa acuminata]
          Length = 103

 Score =  150 bits (378), Expect = 2e-34
 Identities = 74/103 (71%), Positives = 87/103 (84%), Gaps = 1/103 (0%)
 Frame = -3

Query: 409 MDKVMKLASKTAVVIFSKSSCCMCHAIKSLFYDLGVSPAICELDEEPNGREMEKALQR-L 233
           MD+VMKLAS+ AVVIFS SSCCMCH IK LF +LGV+PA+ ELDE+P GREMEKAL + L
Sbjct: 1   MDRVMKLASQKAVVIFSLSSCCMCHTIKRLFCELGVNPAVYELDEDPRGREMEKALVKLL 60

Query: 232 GCNPSVPAVYIGGQLVNSTNTIMSLHLSGSLVPMLREAGAIWL 104
           G NPSVP V+IGG+LV ST+ IM+LHL G L P+LREAGA+WL
Sbjct: 61  GRNPSVPVVFIGGKLVGSTDRIMALHLGGKLTPLLREAGALWL 103


>ref|XP_003529587.1| PREDICTED: monothiol glutaredoxin-S10-like [Glycine max]
          Length = 102

 Score =  148 bits (374), Expect = 5e-34
 Identities = 71/102 (69%), Positives = 85/102 (83%)
 Frame = -3

Query: 409 MDKVMKLASKTAVVIFSKSSCCMCHAIKSLFYDLGVSPAICELDEEPNGREMEKALQRLG 230
           MD+V KLAS+ AVVIFSKSSC MCHAIK LFY+LGV P I E+DEE  G+E+E  L RLG
Sbjct: 1   MDRVAKLASQKAVVIFSKSSCGMCHAIKRLFYELGVGPTIYEVDEESRGKEIEWCLMRLG 60

Query: 229 CNPSVPAVYIGGQLVNSTNTIMSLHLSGSLVPMLREAGAIWL 104
           CNPSVPAV+IGG+ V + NT+M+LHL+GSL  MLR+AGA+WL
Sbjct: 61  CNPSVPAVFIGGKFVGAPNTVMTLHLNGSLKKMLRDAGALWL 102


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