BLASTX nr result

ID: Coptis23_contig00029631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029631
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513045.1| conserved hypothetical protein [Ricinus comm...   129   2e-28
ref|XP_002264860.1| PREDICTED: uncharacterized protein LOC100244...   124   6e-27
emb|CAN83338.1| hypothetical protein VITISV_011144 [Vitis vinifera]   124   6e-27
ref|XP_002299202.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26
ref|XP_002280257.1| PREDICTED: uncharacterized protein LOC100250...   121   7e-26

>ref|XP_002513045.1| conserved hypothetical protein [Ricinus communis]
           gi|223548056|gb|EEF49548.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 361

 Score =  129 bits (324), Expect = 2e-28
 Identities = 59/106 (55%), Positives = 75/106 (70%), Gaps = 3/106 (2%)
 Frame = +2

Query: 179 GRATPXXXXXXXXXXXXATYNLITLVLHNRSSG---YDNSDSGSLSMLHDPITHMPERVK 349
           GRA+P            ATYNL+T+++HNRS G   +D+SD G   +  DP+  MPE  K
Sbjct: 2   GRASPLLLILLVLGFFFATYNLVTMIMHNRSVGKRIHDDSDGG---IFFDPVIEMPEDAK 58

Query: 350 KQETVRLPFHVALTATDGPYNQWQCRIMYYWYKKVKDMPGSDMGGF 487
           K +  R+PFHVALTATD PY++WQCRIMYYWYK+ KD+PGSD+GGF
Sbjct: 59  KSKNARMPFHVALTATDAPYSKWQCRIMYYWYKQKKDLPGSDLGGF 104


>ref|XP_002264860.1| PREDICTED: uncharacterized protein LOC100244671 [Vitis vinifera]
          Length = 362

 Score =  124 bits (312), Expect = 6e-27
 Identities = 53/86 (61%), Positives = 67/86 (77%)
 Frame = +2

Query: 230 ATYNLITLVLHNRSSGYDNSDSGSLSMLHDPITHMPERVKKQETVRLPFHVALTATDGPY 409
           ATYNL+T+ +HNR++G    D     +L DPI  MPE V+K +  +LPFH+ALTATD PY
Sbjct: 19  ATYNLLTMTIHNRATGTLVVDESDHRLLSDPIIEMPENVRKPKNAKLPFHIALTATDAPY 78

Query: 410 NQWQCRIMYYWYKKVKDMPGSDMGGF 487
           ++WQCRIMYYWYKK KD+PGS+MGGF
Sbjct: 79  SKWQCRIMYYWYKKKKDLPGSEMGGF 104


>emb|CAN83338.1| hypothetical protein VITISV_011144 [Vitis vinifera]
          Length = 416

 Score =  124 bits (312), Expect = 6e-27
 Identities = 53/86 (61%), Positives = 67/86 (77%)
 Frame = +2

Query: 230 ATYNLITLVLHNRSSGYDNSDSGSLSMLHDPITHMPERVKKQETVRLPFHVALTATDGPY 409
           ATYNL+T+ +HNR++G    D     +L DPI  MPE V+K +  +LPFH+ALTATD PY
Sbjct: 19  ATYNLLTMTIHNRATGTLVVDESDHRLLSDPIIEMPENVRKPKNAKLPFHIALTATDAPY 78

Query: 410 NQWQCRIMYYWYKKVKDMPGSDMGGF 487
           ++WQCRIMYYWYKK KD+PGS+MGGF
Sbjct: 79  SKWQCRIMYYWYKKKKDLPGSEMGGF 104


>ref|XP_002299202.1| predicted protein [Populus trichocarpa] gi|222846460|gb|EEE84007.1|
           predicted protein [Populus trichocarpa]
          Length = 362

 Score =  121 bits (304), Expect = 5e-26
 Identities = 55/103 (53%), Positives = 69/103 (66%)
 Frame = +2

Query: 179 GRATPXXXXXXXXXXXXATYNLITLVLHNRSSGYDNSDSGSLSMLHDPITHMPERVKKQE 358
           GRA+             ATYNL+ +++H RS G    D     +  DP+T MPE VKK +
Sbjct: 2   GRASLLVLILLTIGFFFATYNLVAMIMHYRSIGKWAHDDSDGQIFLDPVTEMPEDVKKAK 61

Query: 359 TVRLPFHVALTATDGPYNQWQCRIMYYWYKKVKDMPGSDMGGF 487
             ++PFHVALTATD PY++WQCRIMYYWYKK KD+PGS+MGGF
Sbjct: 62  NAKMPFHVALTATDAPYSKWQCRIMYYWYKKKKDLPGSEMGGF 104


>ref|XP_002280257.1| PREDICTED: uncharacterized protein LOC100250010 [Vitis vinifera]
          Length = 367

 Score =  121 bits (303), Expect = 7e-26
 Identities = 62/111 (55%), Positives = 74/111 (66%)
 Frame = +2

Query: 155 MIGRKNIGGRATPXXXXXXXXXXXXATYNLITLVLHNRSSGYDNSDSGSLSMLHDPITHM 334
           MI RK++G RA+             ATYNL+T+++HNR SG  N  +    +  DPIT M
Sbjct: 1   MIVRKSMG-RASLLLLVLLALGFFFATYNLLTMIMHNRGSGLGNWMTDDFDVF-DPITRM 58

Query: 335 PERVKKQETVRLPFHVALTATDGPYNQWQCRIMYYWYKKVKDMPGSDMGGF 487
            +  KK     L FHVALTATD PY+QWQCRIMYYWYKKVKDMPGS+MGGF
Sbjct: 59  TKETKKVGNRNLYFHVALTATDAPYSQWQCRIMYYWYKKVKDMPGSEMGGF 109


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