BLASTX nr result
ID: Coptis23_contig00029631
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00029631 (487 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513045.1| conserved hypothetical protein [Ricinus comm... 129 2e-28 ref|XP_002264860.1| PREDICTED: uncharacterized protein LOC100244... 124 6e-27 emb|CAN83338.1| hypothetical protein VITISV_011144 [Vitis vinifera] 124 6e-27 ref|XP_002299202.1| predicted protein [Populus trichocarpa] gi|2... 121 5e-26 ref|XP_002280257.1| PREDICTED: uncharacterized protein LOC100250... 121 7e-26 >ref|XP_002513045.1| conserved hypothetical protein [Ricinus communis] gi|223548056|gb|EEF49548.1| conserved hypothetical protein [Ricinus communis] Length = 361 Score = 129 bits (324), Expect = 2e-28 Identities = 59/106 (55%), Positives = 75/106 (70%), Gaps = 3/106 (2%) Frame = +2 Query: 179 GRATPXXXXXXXXXXXXATYNLITLVLHNRSSG---YDNSDSGSLSMLHDPITHMPERVK 349 GRA+P ATYNL+T+++HNRS G +D+SD G + DP+ MPE K Sbjct: 2 GRASPLLLILLVLGFFFATYNLVTMIMHNRSVGKRIHDDSDGG---IFFDPVIEMPEDAK 58 Query: 350 KQETVRLPFHVALTATDGPYNQWQCRIMYYWYKKVKDMPGSDMGGF 487 K + R+PFHVALTATD PY++WQCRIMYYWYK+ KD+PGSD+GGF Sbjct: 59 KSKNARMPFHVALTATDAPYSKWQCRIMYYWYKQKKDLPGSDLGGF 104 >ref|XP_002264860.1| PREDICTED: uncharacterized protein LOC100244671 [Vitis vinifera] Length = 362 Score = 124 bits (312), Expect = 6e-27 Identities = 53/86 (61%), Positives = 67/86 (77%) Frame = +2 Query: 230 ATYNLITLVLHNRSSGYDNSDSGSLSMLHDPITHMPERVKKQETVRLPFHVALTATDGPY 409 ATYNL+T+ +HNR++G D +L DPI MPE V+K + +LPFH+ALTATD PY Sbjct: 19 ATYNLLTMTIHNRATGTLVVDESDHRLLSDPIIEMPENVRKPKNAKLPFHIALTATDAPY 78 Query: 410 NQWQCRIMYYWYKKVKDMPGSDMGGF 487 ++WQCRIMYYWYKK KD+PGS+MGGF Sbjct: 79 SKWQCRIMYYWYKKKKDLPGSEMGGF 104 >emb|CAN83338.1| hypothetical protein VITISV_011144 [Vitis vinifera] Length = 416 Score = 124 bits (312), Expect = 6e-27 Identities = 53/86 (61%), Positives = 67/86 (77%) Frame = +2 Query: 230 ATYNLITLVLHNRSSGYDNSDSGSLSMLHDPITHMPERVKKQETVRLPFHVALTATDGPY 409 ATYNL+T+ +HNR++G D +L DPI MPE V+K + +LPFH+ALTATD PY Sbjct: 19 ATYNLLTMTIHNRATGTLVVDESDHRLLSDPIIEMPENVRKPKNAKLPFHIALTATDAPY 78 Query: 410 NQWQCRIMYYWYKKVKDMPGSDMGGF 487 ++WQCRIMYYWYKK KD+PGS+MGGF Sbjct: 79 SKWQCRIMYYWYKKKKDLPGSEMGGF 104 >ref|XP_002299202.1| predicted protein [Populus trichocarpa] gi|222846460|gb|EEE84007.1| predicted protein [Populus trichocarpa] Length = 362 Score = 121 bits (304), Expect = 5e-26 Identities = 55/103 (53%), Positives = 69/103 (66%) Frame = +2 Query: 179 GRATPXXXXXXXXXXXXATYNLITLVLHNRSSGYDNSDSGSLSMLHDPITHMPERVKKQE 358 GRA+ ATYNL+ +++H RS G D + DP+T MPE VKK + Sbjct: 2 GRASLLVLILLTIGFFFATYNLVAMIMHYRSIGKWAHDDSDGQIFLDPVTEMPEDVKKAK 61 Query: 359 TVRLPFHVALTATDGPYNQWQCRIMYYWYKKVKDMPGSDMGGF 487 ++PFHVALTATD PY++WQCRIMYYWYKK KD+PGS+MGGF Sbjct: 62 NAKMPFHVALTATDAPYSKWQCRIMYYWYKKKKDLPGSEMGGF 104 >ref|XP_002280257.1| PREDICTED: uncharacterized protein LOC100250010 [Vitis vinifera] Length = 367 Score = 121 bits (303), Expect = 7e-26 Identities = 62/111 (55%), Positives = 74/111 (66%) Frame = +2 Query: 155 MIGRKNIGGRATPXXXXXXXXXXXXATYNLITLVLHNRSSGYDNSDSGSLSMLHDPITHM 334 MI RK++G RA+ ATYNL+T+++HNR SG N + + DPIT M Sbjct: 1 MIVRKSMG-RASLLLLVLLALGFFFATYNLLTMIMHNRGSGLGNWMTDDFDVF-DPITRM 58 Query: 335 PERVKKQETVRLPFHVALTATDGPYNQWQCRIMYYWYKKVKDMPGSDMGGF 487 + KK L FHVALTATD PY+QWQCRIMYYWYKKVKDMPGS+MGGF Sbjct: 59 TKETKKVGNRNLYFHVALTATDAPYSQWQCRIMYYWYKKVKDMPGSEMGGF 109