BLASTX nr result

ID: Coptis23_contig00029630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029630
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277100.1| PREDICTED: syntaxin-51 [Vitis vinifera] gi|2...   107   1e-21
ref|XP_003545109.1| PREDICTED: syntaxin-51-like [Glycine max]         106   2e-21
gb|ACU19604.1| unknown [Glycine max]                                  106   2e-21
gb|AFK40910.1| unknown [Lotus japonicus]                              104   7e-21
ref|XP_003573428.1| PREDICTED: syntaxin-52-like [Brachypodium di...   103   1e-20

>ref|XP_002277100.1| PREDICTED: syntaxin-51 [Vitis vinifera]
           gi|297737506|emb|CBI26707.3| unnamed protein product
           [Vitis vinifera]
          Length = 232

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/70 (72%), Positives = 60/70 (85%)
 Frame = +2

Query: 2   INEEVDLHTRLIESLDQHVDSTDSRLQLVQKKLAILNKHMKGGCSCMLLLLAVIGIMILA 181
           +NEE+DLHTRLI++LDQHVD TDSRL+ VQK LAILNK  KGGCSC+ LLL+V+GI+IL 
Sbjct: 163 VNEELDLHTRLIDNLDQHVDITDSRLKRVQKNLAILNKRTKGGCSCLCLLLSVVGIVILI 222

Query: 182 VVAWSLVKYL 211
           V  W LVKYL
Sbjct: 223 VAIWLLVKYL 232


>ref|XP_003545109.1| PREDICTED: syntaxin-51-like [Glycine max]
          Length = 362

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/70 (71%), Positives = 59/70 (84%)
 Frame = +2

Query: 2   INEEVDLHTRLIESLDQHVDSTDSRLQLVQKKLAILNKHMKGGCSCMLLLLAVIGIMILA 181
           +NEE+DLHTRLI+ LDQHVD TDSRL+ VQK LA+LNK  KGGCSCM +LL+V+GI+ L 
Sbjct: 293 VNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAVLNKRTKGGCSCMCMLLSVVGIVALI 352

Query: 182 VVAWSLVKYL 211
           VV W LVKYL
Sbjct: 353 VVIWLLVKYL 362


>gb|ACU19604.1| unknown [Glycine max]
          Length = 232

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/70 (71%), Positives = 59/70 (84%)
 Frame = +2

Query: 2   INEEVDLHTRLIESLDQHVDSTDSRLQLVQKKLAILNKHMKGGCSCMLLLLAVIGIMILA 181
           +NEE+DLHTRLI+ LDQHVD TDSRL+ VQK LA+LNK  KGGCSCM +LL+V+GI+ L 
Sbjct: 163 VNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAVLNKRTKGGCSCMCMLLSVVGIVALI 222

Query: 182 VVAWSLVKYL 211
           VV W LVKYL
Sbjct: 223 VVIWLLVKYL 232


>gb|AFK40910.1| unknown [Lotus japonicus]
          Length = 229

 Score =  104 bits (260), Expect = 7e-21
 Identities = 49/70 (70%), Positives = 59/70 (84%)
 Frame = +2

Query: 2   INEEVDLHTRLIESLDQHVDSTDSRLQLVQKKLAILNKHMKGGCSCMLLLLAVIGIMILA 181
           +NEE+ LHTRLI+ LD+HVD TDSRL+ VQK LA+LNK  KGGCSC+ +LLAV+GI+IL 
Sbjct: 160 VNEELTLHTRLIDDLDEHVDVTDSRLRRVQKHLAVLNKRTKGGCSCLCMLLAVVGIVILV 219

Query: 182 VVAWSLVKYL 211
           VV W LVKYL
Sbjct: 220 VVIWLLVKYL 229


>ref|XP_003573428.1| PREDICTED: syntaxin-52-like [Brachypodium distachyon]
          Length = 231

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/70 (67%), Positives = 59/70 (84%)
 Frame = +2

Query: 2   INEEVDLHTRLIESLDQHVDSTDSRLQLVQKKLAILNKHMKGGCSCMLLLLAVIGIMILA 181
           +NEE+DLHT+LIE LD HVD T+SRLQ VQKKLA+LNK  KGGCSCM LLL+V+ I++L 
Sbjct: 162 VNEELDLHTKLIEDLDDHVDGTNSRLQRVQKKLAVLNKRAKGGCSCMSLLLSVVSIVMLV 221

Query: 182 VVAWSLVKYL 211
           V+ W L+K+L
Sbjct: 222 VIVWLLMKFL 231


Top