BLASTX nr result

ID: Coptis23_contig00029628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029628
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275319.1| PREDICTED: NAC domain-containing protein 8 [...    87   2e-15
ref|XP_002278661.1| PREDICTED: NAC domain-containing protein 8 [...    86   4e-15
emb|CAN77470.1| hypothetical protein VITISV_029763 [Vitis vinifera]    86   4e-15
ref|XP_002328031.1| NAC domain protein, IPR003441 [Populus trich...    82   5e-14
ref|XP_002309767.1| NAC domain protein, IPR003441 [Populus trich...    79   3e-13

>ref|XP_002275319.1| PREDICTED: NAC domain-containing protein 8 [Vitis vinifera]
           gi|302143344|emb|CBI21905.3| unnamed protein product
           [Vitis vinifera]
          Length = 303

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 43/79 (54%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
 Frame = -1

Query: 533 VFYQTQPRQCSSIIRDSVPSKEKARH-GHEGPSFKDTSLADYYNPTTLIAYDQSGHNMRT 357
           VFYQTQPRQCSSI++DS+PSK K  H GHE P+ ++ +L +YYNP + I++DQ   N R 
Sbjct: 216 VFYQTQPRQCSSIMKDSLPSKLKDHHSGHESPNLRNNALVEYYNPNSFISFDQGSQN-RL 274

Query: 356 IPSQLLPNFVVNAGGSSFL 300
             ++L+PNF V+  GS+FL
Sbjct: 275 SHARLIPNFTVH-DGSTFL 292


>ref|XP_002278661.1| PREDICTED: NAC domain-containing protein 8 [Vitis vinifera]
          Length = 312

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 46/96 (47%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
 Frame = -1

Query: 533 VFYQTQPRQCSSIIRDSVPSKEKARHGHEGPSFKDTSLADYYNPTTLIAYDQSGHNMRTI 354
           VFYQTQPRQC   I+DS+ +K  +R  H+GP  K  +L +YY+P + I+YDQ  HN R  
Sbjct: 216 VFYQTQPRQCGLSIKDSLDNKSNSRSAHDGPIIKSAALVEYYHP-SFISYDQVSHN-RES 273

Query: 353 PSQLLPNFVVNAGGSSF--LP*ESCNGNERSEAGRR 252
           P QL+PN VV   GSSF  L  ++  GN R     R
Sbjct: 274 PPQLIPNLVVQGDGSSFIRLAADASKGNLRGNRDGR 309


>emb|CAN77470.1| hypothetical protein VITISV_029763 [Vitis vinifera]
          Length = 796

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 46/96 (47%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
 Frame = -1

Query: 533 VFYQTQPRQCSSIIRDSVPSKEKARHGHEGPSFKDTSLADYYNPTTLIAYDQSGHNMRTI 354
           VFYQTQPRQC   I+DS+ +K  +R  H+GP  K  +L +YY+P + I+YDQ  HN R  
Sbjct: 700 VFYQTQPRQCGLSIKDSLDNKSNSRSAHDGPIIKSAALVEYYHP-SFISYDQVSHN-RES 757

Query: 353 PSQLLPNFVVNAGGSSF--LP*ESCNGNERSEAGRR 252
           P QL+PN VV   GSSF  L  ++  GN R     R
Sbjct: 758 PPQLIPNLVVQGDGSSFIRLAADASKGNLRGNRDGR 793


>ref|XP_002328031.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222837440|gb|EEE75819.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 299

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 7/86 (8%)
 Frame = -1

Query: 533 VFYQTQPRQCSSIIRD--SVPSKEKAR-HGHEGPSFKD-TSLADYYNPTTLIAYDQSGHN 366
           VFYQTQPRQC S+I+D  SVPSK K +  GHEG + K+ T+L +YY+P++ I++DQSG N
Sbjct: 215 VFYQTQPRQCGSLIKDSVSVPSKLKVQSSGHEGSNLKNSTTLVEYYHPSSFISFDQSGQN 274

Query: 365 MRTIPS---QLLPNFVVNAGGSSFLP 297
             T P+   QLL +F V+  GSSF+P
Sbjct: 275 RSTNPNPPQQLLSHFAVH-DGSSFIP 299


>ref|XP_002309767.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222852670|gb|EEE90217.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 298

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 45/86 (52%), Positives = 60/86 (69%), Gaps = 7/86 (8%)
 Frame = -1

Query: 533 VFYQTQPRQCSSIIRDSVPSKEKAR---HGHEGPSFKD-TSLADYYNPTTLIAYDQSGHN 366
           VFYQTQPRQC S+I+DSVP   K +    GHEG + K+ T+L +YYNP + I++DQSG N
Sbjct: 215 VFYQTQPRQCGSLIKDSVPVPSKLKVQSSGHEGSNLKNSTTLVEYYNP-SFISFDQSGQN 273

Query: 365 MRTIPS---QLLPNFVVNAGGSSFLP 297
             T P+   QLLP+F ++  GSS +P
Sbjct: 274 RSTNPNPPQQLLPHFALH-DGSSLIP 298


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