BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029627
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    60   2e-07
gb|ABW81094.1| RT6non-ltr [Cleome spinosa]                             59   3e-07
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...    59   5e-07
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    57   1e-06
gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japo...    55   5e-06

>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/73 (39%), Positives = 45/73 (61%)
 Frame = +2

Query: 53   ADDVIIFNKGDARSVRNIADLLERYQASYGQSVNKNKSRMFVGGMSMDRRQNLQQILGIQ 232
            ADDV++F +GD++SV  + + + ++  S G  VN  K +MF GGM    ++NL++I    
Sbjct: 1013 ADDVLLFCRGDSKSVSMMMETIRKFSDSTGLKVNPAKCQMFFGGMDGCSKENLRRITDFA 1072

Query: 233  VGVFSEKYLGVPL 271
             G    +YLGVPL
Sbjct: 1073 EGKLPVRYLGVPL 1085


>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
          Length = 459

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/73 (36%), Positives = 45/73 (61%)
 Frame = +2

Query: 53  ADDVIIFNKGDARSVRNIADLLERYQASYGQSVNKNKSRMFVGGMSMDRRQNLQQILGIQ 232
           ADD++IF+K   +S++ + + L  +  + G  VN  K  MF+GG++   +Q L   +GI 
Sbjct: 68  ADDLVIFSKASRQSMQAVQNCLNWFGRNSGLEVNTGKCEMFLGGLTDSEKQELSSCMGIT 127

Query: 233 VGVFSEKYLGVPL 271
           +G F  KYLG+P+
Sbjct: 128 LGNFPMKYLGLPV 140


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/73 (38%), Positives = 45/73 (61%)
 Frame = +2

Query: 53   ADDVIIFNKGDARSVRNIADLLERYQASYGQSVNKNKSRMFVGGMSMDRRQNLQQILGIQ 232
            ADDV++F +GD++SV  + + + ++  S G  VN  K +MF GGM    ++NL++I    
Sbjct: 896  ADDVLLFCRGDSKSVSMMMETIRKFSDSTGLKVNPAKCQMFFGGMDGCSKENLRRITDFA 955

Query: 233  VGVFSEKYLGVPL 271
             G    +YLG+PL
Sbjct: 956  EGKLPVRYLGMPL 968


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/73 (38%), Positives = 39/73 (53%)
 Frame = +2

Query: 53  ADDVIIFNKGDARSVRNIADLLERYQASYGQSVNKNKSRMFVGGMSMDRRQNLQQILGIQ 232
           ADDV+IF  G  R++R +  +  +Y    GQ +N  KSR F   M+  R Q +  +LG  
Sbjct: 694 ADDVLIFCTGTKRNIRRLIKIFSQYSEVSGQLINNAKSRFFTSAMTGSRVQMISSLLGFN 753

Query: 233 VGVFSEKYLGVPL 271
           VG     YLG P+
Sbjct: 754 VGSLPFTYLGCPI 766


>gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japonica Group]
          Length = 1170

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +2

Query: 53  ADDVIIFNKGDARSVRNIADLLERYQASYGQSVNKNK-SRMFVGGMSMDRRQNLQQILGI 229
           ADD ++F K D      I D+L+ Y++S GQ +N +K S +F        ++++++ILG+
Sbjct: 547 ADDSLLFFKADTEQASRIRDVLQMYESSTGQLINPSKCSMLFSDFCPQQHQEDIKRILGV 606

Query: 230 QVGVFSEKYLGVP 268
               F EKYLG+P
Sbjct: 607 TNSSFEEKYLGLP 619