BLASTX nr result

ID: Coptis23_contig00029616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029616
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276624.2| PREDICTED: uncharacterized protein LOC100259...   124   8e-27
emb|CBI34727.3| unnamed protein product [Vitis vinifera]              124   8e-27
ref|XP_002299551.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_003581541.1| PREDICTED: uncharacterized protein LOC100837...   116   2e-24
ref|XP_002509741.1| conserved hypothetical protein [Ricinus comm...   114   8e-24

>ref|XP_002276624.2| PREDICTED: uncharacterized protein LOC100259829 [Vitis vinifera]
          Length = 1141

 Score =  124 bits (311), Expect = 8e-27
 Identities = 62/111 (55%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
 Frame = -3

Query: 330 EADEILKVIKLTWITLGINQKMHEALYGWVLFQKFVETGDTKLLDEAILLIQKVQSRDD- 154
           EADEIL +IKLTW +LGINQ+MH  LYGWVLFQ+FV T +  LL+ AIL +Q+V S +D 
Sbjct: 394 EADEILMLIKLTWSSLGINQRMHNVLYGWVLFQQFVGTDEATLLEYAILEVQQVLSTEDI 453

Query: 153 DEKLAAYMDCFVCSVGIIGRKVSSNLIDAIFIMISTWCDKKLKDYHRHFSQ 1
           D K   YM+  VCS    G++   +L++AIF  +S WCD KL DYH HFS+
Sbjct: 454 DGKEEQYMNSLVCSRVFNGKEKKLSLVEAIFFSMSIWCDSKLLDYHLHFSK 504


>emb|CBI34727.3| unnamed protein product [Vitis vinifera]
          Length = 1152

 Score =  124 bits (311), Expect = 8e-27
 Identities = 62/111 (55%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
 Frame = -3

Query: 330 EADEILKVIKLTWITLGINQKMHEALYGWVLFQKFVETGDTKLLDEAILLIQKVQSRDD- 154
           EADEIL +IKLTW +LGINQ+MH  LYGWVLFQ+FV T +  LL+ AIL +Q+V S +D 
Sbjct: 387 EADEILMLIKLTWSSLGINQRMHNVLYGWVLFQQFVGTDEATLLEYAILEVQQVLSTEDI 446

Query: 153 DEKLAAYMDCFVCSVGIIGRKVSSNLIDAIFIMISTWCDKKLKDYHRHFSQ 1
           D K   YM+  VCS    G++   +L++AIF  +S WCD KL DYH HFS+
Sbjct: 447 DGKEEQYMNSLVCSRVFNGKEKKLSLVEAIFFSMSIWCDSKLLDYHLHFSK 497


>ref|XP_002299551.1| predicted protein [Populus trichocarpa] gi|222846809|gb|EEE84356.1|
           predicted protein [Populus trichocarpa]
          Length = 1373

 Score =  117 bits (293), Expect = 1e-24
 Identities = 61/137 (44%), Positives = 81/137 (59%), Gaps = 27/137 (19%)
 Frame = -3

Query: 330 EADEILKVIKLTWITLGINQKMHEALYGWVLFQ--------------------------- 232
           EADE+L +IKLTW TLGI + MH+ALYGWVLFQ                           
Sbjct: 554 EADEMLLLIKLTWSTLGITETMHDALYGWVLFQQLAVMVKPCFILDIISLGIHCNTNFIL 613

Query: 231 KFVETGDTKLLDEAILLIQKVQSRDDDEKLAAYMDCFVCSVGIIGRKVSSNLIDAIFIMI 52
           KFV TG + LL+ A+L +QKV S ++D++   YM+  VC+    G  +  +L+ +IF+ I
Sbjct: 614 KFVRTGGSVLLENAVLHLQKVLSTEEDDRKEQYMNSLVCTKQCNGSHLKLHLLQSIFVSI 673

Query: 51  STWCDKKLKDYHRHFSQ 1
           S WCD KL+DYH HFSQ
Sbjct: 674 SMWCDYKLQDYHSHFSQ 690


>ref|XP_003581541.1| PREDICTED: uncharacterized protein LOC100837541 [Brachypodium
           distachyon]
          Length = 719

 Score =  116 bits (291), Expect = 2e-24
 Identities = 53/110 (48%), Positives = 77/110 (70%)
 Frame = -3

Query: 330 EADEILKVIKLTWITLGINQKMHEALYGWVLFQKFVETGDTKLLDEAILLIQKVQSRDDD 151
           EADEIL+ +KLTW  LGI Q++H+ LY WVLFQKF++TG+  LL +  L IQK+Q   D 
Sbjct: 235 EADEILETVKLTWPILGITQQLHDILYAWVLFQKFIQTGENLLLKQIGLQIQKLQLHSDV 294

Query: 150 EKLAAYMDCFVCSVGIIGRKVSSNLIDAIFIMISTWCDKKLKDYHRHFSQ 1
           +++  Y++ F+CSV   G   S NL+D   + I+ WC ++L++YH +FSQ
Sbjct: 295 KEVELYINSFICSVEGCGSNRSLNLVDCALLKINMWCRRQLENYHLYFSQ 344


>ref|XP_002509741.1| conserved hypothetical protein [Ricinus communis]
           gi|223549640|gb|EEF51128.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1146

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/111 (52%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
 Frame = -3

Query: 330 EADEILKVIKLTWITLGINQKMHEALYGWVLFQKFVETGDTKLLDEAILLIQK-VQSRDD 154
           EA E+L  IK TW  LGI QK+H ALYGWVLF++FVET   +LL++A+L +QK V + + 
Sbjct: 399 EAGEVLSRIKSTWAALGITQKLHNALYGWVLFRQFVETDGGQLLEDAVLELQKFVSAEEA 458

Query: 153 DEKLAAYMDCFVCSVGIIGRKVSSNLIDAIFIMISTWCDKKLKDYHRHFSQ 1
           D K   YM+  VCS     R+V  NL  +I + IS WCD  L+DYH HFSQ
Sbjct: 459 DGKEEQYMNSLVCSRQCDQREVKLNLAQSICLSISIWCDSTLQDYHLHFSQ 509


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