BLASTX nr result
ID: Coptis23_contig00029614
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00029614 (363 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002530557.1| hypothetical protein RCOM_0303940 [Ricinus c... 78 6e-13 ref|XP_002321932.1| predicted protein [Populus trichocarpa] gi|2... 77 1e-12 emb|CBI24021.3| unnamed protein product [Vitis vinifera] 71 8e-11 ref|XP_002263918.1| PREDICTED: uncharacterized protein LOC100261... 71 8e-11 emb|CAN76723.1| hypothetical protein VITISV_042980 [Vitis vinifera] 70 2e-10 >ref|XP_002530557.1| hypothetical protein RCOM_0303940 [Ricinus communis] gi|223529895|gb|EEF31825.1| hypothetical protein RCOM_0303940 [Ricinus communis] Length = 725 Score = 78.2 bits (191), Expect = 6e-13 Identities = 55/122 (45%), Positives = 69/122 (56%), Gaps = 14/122 (11%) Frame = -2 Query: 359 ASPRSQSPANARA----SNEQLVPQPSLSRNSSRKADQSPYRRNPLSEIDDNCLRSEQGA 192 ASPRSQSPA A SNE QPSLSR+SSRKA+QSPYRRNPLSEID N L Q Sbjct: 341 ASPRSQSPARTNAKGGGSNENNQQQPSLSRSSSRKAEQSPYRRNPLSEIDTNSLVYAQAT 400 Query: 191 ALKRPDHQIKKTNLTNNKAQC-NKEVEEGIAAKKPFHF----QSQKPD-----EVNIGGA 42 + N +N++AQ NKE+E + K+ + Q KP+ ++N G+ Sbjct: 401 G-----NNTTANNNSNSRAQTRNKELEGKLMVKESVNVLNQAQMHKPNAEANSKINAQGS 455 Query: 41 TK 36 K Sbjct: 456 NK 457 >ref|XP_002321932.1| predicted protein [Populus trichocarpa] gi|222868928|gb|EEF06059.1| predicted protein [Populus trichocarpa] Length = 736 Score = 77.4 bits (189), Expect = 1e-12 Identities = 51/101 (50%), Positives = 65/101 (64%), Gaps = 3/101 (2%) Frame = -2 Query: 359 ASPRSQSPA--NARASNEQLVPQPSLSRNSSRKADQSPYRRNPLSEIDDNCLRSEQGAAL 186 ASP S+SPA NA+ SNE Q SLSR++SRKADQSPYRRNPLSEID N L+ Q A Sbjct: 342 ASPSSKSPARTNAKTSNENN-QQLSLSRSNSRKADQSPYRRNPLSEIDLNSLQYSQPPA- 399 Query: 185 KRPDHQIKKTNLTNNKAQC-NKEVEEGIAAKKPFHFQSQKP 66 K T +NN+A+ NK++E + K+ F+ +Q P Sbjct: 400 ------NKATCTSNNRARIRNKDIEGQVVVKESFNLLNQTP 434 >emb|CBI24021.3| unnamed protein product [Vitis vinifera] Length = 595 Score = 71.2 bits (173), Expect = 8e-11 Identities = 41/66 (62%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Frame = -2 Query: 356 SPRSQSPANARA-SNEQLVPQPSLSRNSSRKADQSPYRRNPLSEIDDNCLRSEQGAALKR 180 +PRS+SPANAR SN+ PSLSRNSSRKA+QSPYRRNPLSEID N A Sbjct: 271 TPRSRSPANARVVSNDSQNQHPSLSRNSSRKAEQSPYRRNPLSEIDPNINNRGLKAREIE 330 Query: 179 PDHQIK 162 PD Q K Sbjct: 331 PDCQQK 336 >ref|XP_002263918.1| PREDICTED: uncharacterized protein LOC100261489 [Vitis vinifera] Length = 710 Score = 71.2 bits (173), Expect = 8e-11 Identities = 41/66 (62%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Frame = -2 Query: 356 SPRSQSPANARA-SNEQLVPQPSLSRNSSRKADQSPYRRNPLSEIDDNCLRSEQGAALKR 180 +PRS+SPANAR SN+ PSLSRNSSRKA+QSPYRRNPLSEID N A Sbjct: 334 TPRSRSPANARVVSNDSQNQHPSLSRNSSRKAEQSPYRRNPLSEIDPNINNRGLKAREIE 393 Query: 179 PDHQIK 162 PD Q K Sbjct: 394 PDCQQK 399 >emb|CAN76723.1| hypothetical protein VITISV_042980 [Vitis vinifera] Length = 685 Score = 70.1 bits (170), Expect = 2e-10 Identities = 41/66 (62%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Frame = -2 Query: 356 SPRSQSPANARA-SNEQLVPQPSLSRNSSRKADQSPYRRNPLSEIDDNCLRSEQGAALKR 180 +PRS+SPANAR SN PSLSRNSSRKA+QSPYRRNPLSEID N A Sbjct: 334 TPRSRSPANARVVSNXNQNQHPSLSRNSSRKAEQSPYRRNPLSEIDPNINNRGLKAREIE 393 Query: 179 PDHQIK 162 PD Q K Sbjct: 394 PDCQQK 399