BLASTX nr result

ID: Coptis23_contig00029614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029614
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530557.1| hypothetical protein RCOM_0303940 [Ricinus c...    78   6e-13
ref|XP_002321932.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
emb|CBI24021.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002263918.1| PREDICTED: uncharacterized protein LOC100261...    71   8e-11
emb|CAN76723.1| hypothetical protein VITISV_042980 [Vitis vinifera]    70   2e-10

>ref|XP_002530557.1| hypothetical protein RCOM_0303940 [Ricinus communis]
           gi|223529895|gb|EEF31825.1| hypothetical protein
           RCOM_0303940 [Ricinus communis]
          Length = 725

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 55/122 (45%), Positives = 69/122 (56%), Gaps = 14/122 (11%)
 Frame = -2

Query: 359 ASPRSQSPANARA----SNEQLVPQPSLSRNSSRKADQSPYRRNPLSEIDDNCLRSEQGA 192
           ASPRSQSPA   A    SNE    QPSLSR+SSRKA+QSPYRRNPLSEID N L   Q  
Sbjct: 341 ASPRSQSPARTNAKGGGSNENNQQQPSLSRSSSRKAEQSPYRRNPLSEIDTNSLVYAQAT 400

Query: 191 ALKRPDHQIKKTNLTNNKAQC-NKEVEEGIAAKKPFHF----QSQKPD-----EVNIGGA 42
                 +     N +N++AQ  NKE+E  +  K+  +     Q  KP+     ++N  G+
Sbjct: 401 G-----NNTTANNNSNSRAQTRNKELEGKLMVKESVNVLNQAQMHKPNAEANSKINAQGS 455

Query: 41  TK 36
            K
Sbjct: 456 NK 457


>ref|XP_002321932.1| predicted protein [Populus trichocarpa] gi|222868928|gb|EEF06059.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 51/101 (50%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
 Frame = -2

Query: 359 ASPRSQSPA--NARASNEQLVPQPSLSRNSSRKADQSPYRRNPLSEIDDNCLRSEQGAAL 186
           ASP S+SPA  NA+ SNE    Q SLSR++SRKADQSPYRRNPLSEID N L+  Q  A 
Sbjct: 342 ASPSSKSPARTNAKTSNENN-QQLSLSRSNSRKADQSPYRRNPLSEIDLNSLQYSQPPA- 399

Query: 185 KRPDHQIKKTNLTNNKAQC-NKEVEEGIAAKKPFHFQSQKP 66
                  K T  +NN+A+  NK++E  +  K+ F+  +Q P
Sbjct: 400 ------NKATCTSNNRARIRNKDIEGQVVVKESFNLLNQTP 434


>emb|CBI24021.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 41/66 (62%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
 Frame = -2

Query: 356 SPRSQSPANARA-SNEQLVPQPSLSRNSSRKADQSPYRRNPLSEIDDNCLRSEQGAALKR 180
           +PRS+SPANAR  SN+     PSLSRNSSRKA+QSPYRRNPLSEID N       A    
Sbjct: 271 TPRSRSPANARVVSNDSQNQHPSLSRNSSRKAEQSPYRRNPLSEIDPNINNRGLKAREIE 330

Query: 179 PDHQIK 162
           PD Q K
Sbjct: 331 PDCQQK 336


>ref|XP_002263918.1| PREDICTED: uncharacterized protein LOC100261489 [Vitis vinifera]
          Length = 710

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 41/66 (62%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
 Frame = -2

Query: 356 SPRSQSPANARA-SNEQLVPQPSLSRNSSRKADQSPYRRNPLSEIDDNCLRSEQGAALKR 180
           +PRS+SPANAR  SN+     PSLSRNSSRKA+QSPYRRNPLSEID N       A    
Sbjct: 334 TPRSRSPANARVVSNDSQNQHPSLSRNSSRKAEQSPYRRNPLSEIDPNINNRGLKAREIE 393

Query: 179 PDHQIK 162
           PD Q K
Sbjct: 394 PDCQQK 399


>emb|CAN76723.1| hypothetical protein VITISV_042980 [Vitis vinifera]
          Length = 685

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/66 (62%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
 Frame = -2

Query: 356 SPRSQSPANARA-SNEQLVPQPSLSRNSSRKADQSPYRRNPLSEIDDNCLRSEQGAALKR 180
           +PRS+SPANAR  SN      PSLSRNSSRKA+QSPYRRNPLSEID N       A    
Sbjct: 334 TPRSRSPANARVVSNXNQNQHPSLSRNSSRKAEQSPYRRNPLSEIDPNINNRGLKAREIE 393

Query: 179 PDHQIK 162
           PD Q K
Sbjct: 394 PDCQQK 399


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