BLASTX nr result

ID: Coptis23_contig00029613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029613
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60346.1| hypothetical protein VITISV_001795 [Vitis vinifera]   406   e-111
ref|XP_002263615.2| PREDICTED: LOW QUALITY PROTEIN: probable pec...   404   e-110
ref|XP_004164879.1| PREDICTED: putative pectate lyase 2-like [Cu...   385   e-105
ref|XP_004153041.1| PREDICTED: putative pectate lyase 2-like [Cu...   384   e-104
ref|XP_004145189.1| PREDICTED: putative pectate lyase 2-like [Cu...   384   e-104

>emb|CAN60346.1| hypothetical protein VITISV_001795 [Vitis vinifera]
          Length = 397

 Score =  406 bits (1044), Expect = e-111
 Identities = 186/233 (79%), Positives = 211/233 (90%), Gaps = 1/233 (0%)
 Frame = +1

Query: 1   IIHGISIHDCKPGKSGLVRSSPMHLGHRLGSDGDAITIFTSSNVWVDHCFLARCSDGLID 180
           IIHGISIHDCKPGKSGLVRS+ MH+GHRLGSDGDAI+IFTSS+VW+DHC+LA C+DGLID
Sbjct: 165 IIHGISIHDCKPGKSGLVRSTTMHVGHRLGSDGDAISIFTSSHVWIDHCYLASCTDGLID 224

Query: 181 VTHASTAITISNNFFSQHDKVMLFGHNDQFTADKIMKVTVVFNHFGLGLIERMPRVRFGY 360
           V HASTAITISNN+FS HDKVMLFGH+D FTADK+M VTV FNHFG GL++RMPRVRFGY
Sbjct: 225 VIHASTAITISNNYFSHHDKVMLFGHDDHFTADKVMSVTVAFNHFGTGLVQRMPRVRFGY 284

Query: 361 AHVANNRYDEWHMYAIGGSANPTILSEGNYFIAPNDPSSKQVTKRE-GGGWKNWKWRSSK 537
           AH+ANN+YDEW MYAIGGSANPTILSEGN+F AP++ ++K+VTKRE   GWKNWKWRSSK
Sbjct: 285 AHLANNKYDEWEMYAIGGSANPTILSEGNHFTAPDNANTKEVTKREVKSGWKNWKWRSSK 344

Query: 538 DTFVNGAYFTQSGWGSCAPLYSMSQAFTVAEGAMAPALTSNAGPLRCIPRRPC 696
           D FVNGAYF QSGWGSCAPLYS SQAF+VA+G+M PALTS+AGPL C   +PC
Sbjct: 345 DKFVNGAYFVQSGWGSCAPLYSRSQAFSVADGSMVPALTSDAGPLGCSAGKPC 397


>ref|XP_002263615.2| PREDICTED: LOW QUALITY PROTEIN: probable pectate lyase 16 [Vitis
           vinifera]
          Length = 397

 Score =  404 bits (1038), Expect = e-110
 Identities = 185/233 (79%), Positives = 210/233 (90%), Gaps = 1/233 (0%)
 Frame = +1

Query: 1   IIHGISIHDCKPGKSGLVRSSPMHLGHRLGSDGDAITIFTSSNVWVDHCFLARCSDGLID 180
           IIHGISIHDCKPGKSGLVRS+ MH+GHRLGSDGDAI+IFTSS+VW+DHC+LA C+DGLID
Sbjct: 165 IIHGISIHDCKPGKSGLVRSTTMHVGHRLGSDGDAISIFTSSHVWIDHCYLASCTDGLID 224

Query: 181 VTHASTAITISNNFFSQHDKVMLFGHNDQFTADKIMKVTVVFNHFGLGLIERMPRVRFGY 360
           V HASTAITISNN+FS HDKVMLFGH+D FTADK+M VTV FNHFG GL++RMPRVRFGY
Sbjct: 225 VIHASTAITISNNYFSHHDKVMLFGHDDHFTADKVMSVTVAFNHFGTGLVQRMPRVRFGY 284

Query: 361 AHVANNRYDEWHMYAIGGSANPTILSEGNYFIAPNDPSSKQVTKRE-GGGWKNWKWRSSK 537
           AH+ANN+YDEW MYAIGGSANPTILSEGN+F AP++ ++K+VTKRE   GWKNWKWRSSK
Sbjct: 285 AHLANNKYDEWEMYAIGGSANPTILSEGNHFTAPDNANTKEVTKREVKSGWKNWKWRSSK 344

Query: 538 DTFVNGAYFTQSGWGSCAPLYSMSQAFTVAEGAMAPALTSNAGPLRCIPRRPC 696
           D FVNGAYF  SGWGSCAPLYS SQAF+VA+G+M PALTS+AGPL C   +PC
Sbjct: 345 DKFVNGAYFVXSGWGSCAPLYSRSQAFSVADGSMVPALTSDAGPLGCSAGKPC 397


>ref|XP_004164879.1| PREDICTED: putative pectate lyase 2-like [Cucumis sativus]
          Length = 588

 Score =  385 bits (989), Expect = e-105
 Identities = 174/233 (74%), Positives = 202/233 (86%), Gaps = 1/233 (0%)
 Frame = +1

Query: 1    IIHGISIHDCKPGKSGLVRSSPMHLGHRLGSDGDAITIFTSSNVWVDHCFLARCSDGLID 180
            IIHGISIHDCKPGK+GLVR +  H+G R GSDGDAI +F SS+VW+DHC+LARC+DGLID
Sbjct: 356  IIHGISIHDCKPGKAGLVRDTVSHIGKRKGSDGDAIAVFGSSHVWIDHCYLARCTDGLID 415

Query: 181  VTHASTAITISNNFFSQHDKVMLFGHNDQFTADKIMKVTVVFNHFGLGLIERMPRVRFGY 360
            V HAST++TISNN+FSQHDKVML GHND FT DKIM+VT+VFN FG GLIERMPRVRFGY
Sbjct: 416  VIHASTSVTISNNYFSQHDKVMLLGHNDGFTDDKIMRVTIVFNRFGAGLIERMPRVRFGY 475

Query: 361  AHVANNRYDEWHMYAIGGSANPTILSEGNYFIAPNDPSSKQVTKRE-GGGWKNWKWRSSK 537
            AHVANNRYDEW MYAIGGSANPTI SEGNYF+AP + ++KQVTKRE   GWKNWKWRSS+
Sbjct: 476  AHVANNRYDEWKMYAIGGSANPTIFSEGNYFVAPQNSNAKQVTKREVNNGWKNWKWRSSR 535

Query: 538  DTFVNGAYFTQSGWGSCAPLYSMSQAFTVAEGAMAPALTSNAGPLRCIPRRPC 696
            D F+NGAYF  SGWGSC+P+Y+ +Q+F VA G+M PALT+N+GPLRC   + C
Sbjct: 536  DVFLNGAYFVPSGWGSCSPIYTKAQSFPVAPGSMVPALTANSGPLRCFIGKAC 588


>ref|XP_004153041.1| PREDICTED: putative pectate lyase 2-like [Cucumis sativus]
          Length = 381

 Score =  384 bits (986), Expect = e-104
 Identities = 174/233 (74%), Positives = 201/233 (86%), Gaps = 1/233 (0%)
 Frame = +1

Query: 1   IIHGISIHDCKPGKSGLVRSSPMHLGHRLGSDGDAITIFTSSNVWVDHCFLARCSDGLID 180
           IIHGISIHDCKPGK+GLVR +  H+G R GSDGDAI +F SS+VW+DHC+LARC+DGLID
Sbjct: 149 IIHGISIHDCKPGKAGLVRDTVSHIGKRKGSDGDAIAVFGSSHVWIDHCYLARCTDGLID 208

Query: 181 VTHASTAITISNNFFSQHDKVMLFGHNDQFTADKIMKVTVVFNHFGLGLIERMPRVRFGY 360
           V HAST++TISNN+FSQHDKVML GHND FT DKIM+VT+VFN FG GLIERMPRVRFGY
Sbjct: 209 VIHASTSVTISNNYFSQHDKVMLLGHNDGFTDDKIMRVTIVFNRFGAGLIERMPRVRFGY 268

Query: 361 AHVANNRYDEWHMYAIGGSANPTILSEGNYFIAPNDPSSKQVTKRE-GGGWKNWKWRSSK 537
           AHVANNRYDEW MYAIGGSANPTI SEGNYF+AP +  +KQVTKRE   GWKNWKWRSS+
Sbjct: 269 AHVANNRYDEWKMYAIGGSANPTIFSEGNYFVAPQNSYAKQVTKREVNNGWKNWKWRSSR 328

Query: 538 DTFVNGAYFTQSGWGSCAPLYSMSQAFTVAEGAMAPALTSNAGPLRCIPRRPC 696
           D F+NGAYF  SGWGSC+P+Y+ +Q+F VA G+M PALT+N+GPLRC   + C
Sbjct: 329 DVFLNGAYFVPSGWGSCSPIYTKAQSFPVAPGSMVPALTANSGPLRCFIGKAC 381


>ref|XP_004145189.1| PREDICTED: putative pectate lyase 2-like [Cucumis sativus]
          Length = 622

 Score =  384 bits (986), Expect = e-104
 Identities = 174/233 (74%), Positives = 201/233 (86%), Gaps = 1/233 (0%)
 Frame = +1

Query: 1    IIHGISIHDCKPGKSGLVRSSPMHLGHRLGSDGDAITIFTSSNVWVDHCFLARCSDGLID 180
            IIHGISIHDCKPGK+GLVR +  H+G R GSDGDAI +F SS+VW+DHC+LARC+DGLID
Sbjct: 390  IIHGISIHDCKPGKAGLVRDTVSHIGKRKGSDGDAIAVFGSSHVWIDHCYLARCTDGLID 449

Query: 181  VTHASTAITISNNFFSQHDKVMLFGHNDQFTADKIMKVTVVFNHFGLGLIERMPRVRFGY 360
            V HAST++TISNN+FSQHDKVML GHND FT DKIM+VT+VFN FG GLIERMPRVRFGY
Sbjct: 450  VIHASTSVTISNNYFSQHDKVMLLGHNDGFTDDKIMRVTIVFNRFGAGLIERMPRVRFGY 509

Query: 361  AHVANNRYDEWHMYAIGGSANPTILSEGNYFIAPNDPSSKQVTKRE-GGGWKNWKWRSSK 537
            AHVANNRYDEW MYAIGGSANPTI SEGNYF+AP +  +KQVTKRE   GWKNWKWRSS+
Sbjct: 510  AHVANNRYDEWKMYAIGGSANPTIFSEGNYFVAPQNSYAKQVTKREVNNGWKNWKWRSSR 569

Query: 538  DTFVNGAYFTQSGWGSCAPLYSMSQAFTVAEGAMAPALTSNAGPLRCIPRRPC 696
            D F+NGAYF  SGWGSC+P+Y+ +Q+F VA G+M PALT+N+GPLRC   + C
Sbjct: 570  DVFLNGAYFVPSGWGSCSPIYTKAQSFPVAPGSMVPALTANSGPLRCFIGKAC 622


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