BLASTX nr result

ID: Coptis23_contig00029577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029577
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142174.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   174   7e-42
ref|XP_002277700.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   167   1e-39
emb|CAN68264.1| hypothetical protein VITISV_002761 [Vitis vinifera]   167   1e-39
ref|XP_002514434.1| Ubiquitin carboxyl-terminal hydrolase, putat...   166   2e-39
gb|EEC69300.1| hypothetical protein OsI_38365 [Oryza sativa Indi...   165   4e-39

>ref|XP_004142174.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
            sativus] gi|449503435|ref|XP_004162001.1| PREDICTED:
            ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
            sativus]
          Length = 1118

 Score =  174 bits (441), Expect = 7e-42
 Identities = 81/115 (70%), Positives = 98/115 (85%)
 Frame = -2

Query: 350  YVGRLFVKVSGSPYEILTKLNKMAGFSSTQQIELYEELKFEPSVMCVPIHKKLTFRANQL 171
            YVGRLFVK +G P+EILTKLN+MAG++  ++IELYEE+KFEP++MC PI KK TFRA+QL
Sbjct: 708  YVGRLFVKGNGKPFEILTKLNEMAGYAPEEEIELYEEIKFEPNIMCEPIDKKFTFRASQL 767

Query: 170  GDGDILCFQKSPPVQCLQQCRCPDVRSFFEYVHNRLVVHFQSLAKPKEDVFCLQL 6
             DGDI+CFQKSPPV+  +Q R PDV SF EYVHNR VVHF+SL KPKED FCL++
Sbjct: 768  EDGDIVCFQKSPPVENTEQYRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLEM 822


>ref|XP_002277700.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Vitis vinifera]
            gi|296084015|emb|CBI24403.3| unnamed protein product
            [Vitis vinifera]
          Length = 1116

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/115 (66%), Positives = 95/115 (82%)
 Frame = -2

Query: 350  YVGRLFVKVSGSPYEILTKLNKMAGFSSTQQIELYEELKFEPSVMCVPIHKKLTFRANQL 171
            YVGRLFVK +G P EIL+KLN+M G++  ++IELYEE+KF+PSVMC PI KK TFRA+QL
Sbjct: 706  YVGRLFVKSTGKPVEILSKLNEMVGYAPDEEIELYEEIKFDPSVMCEPIDKKFTFRASQL 765

Query: 170  GDGDILCFQKSPPVQCLQQCRCPDVRSFFEYVHNRLVVHFQSLAKPKEDVFCLQL 6
             DGDI+CFQK+PP++  +  R PDV SF EYVHNR VVHF+SL KPKED FCL++
Sbjct: 766  EDGDIICFQKTPPIESGESFRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLEM 820


>emb|CAN68264.1| hypothetical protein VITISV_002761 [Vitis vinifera]
          Length = 510

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/115 (66%), Positives = 95/115 (82%)
 Frame = -2

Query: 350 YVGRLFVKVSGSPYEILTKLNKMAGFSSTQQIELYEELKFEPSVMCVPIHKKLTFRANQL 171
           YVGRLFVK +G P EIL+KLN+M G++  ++IELYEE+KF+PSVMC PI KK TFRA+QL
Sbjct: 100 YVGRLFVKSTGKPVEILSKLNEMVGYAPDEEIELYEEIKFDPSVMCEPIDKKFTFRASQL 159

Query: 170 GDGDILCFQKSPPVQCLQQCRCPDVRSFFEYVHNRLVVHFQSLAKPKEDVFCLQL 6
            DGDI+CFQK+PP++  +  R PDV SF EYVHNR VVHF+SL KPKED FCL++
Sbjct: 160 EDGDIICFQKTPPIESGESFRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLEM 214


>ref|XP_002514434.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
            gi|223546430|gb|EEF47930.1| Ubiquitin carboxyl-terminal
            hydrolase, putative [Ricinus communis]
          Length = 1109

 Score =  166 bits (420), Expect = 2e-39
 Identities = 83/115 (72%), Positives = 94/115 (81%)
 Frame = -2

Query: 350  YVGRLFVKVSGSPYEILTKLNKMAGFSSTQQIELYEELKFEPSVMCVPIHKKLTFRANQL 171
            YVGRLFVK +G P EILTKLN+MAGF+S Q+IELYEE+KFEP+VMC  I KKLTFRA+QL
Sbjct: 706  YVGRLFVKGAGKPLEILTKLNEMAGFASDQEIELYEEIKFEPNVMCEHIDKKLTFRASQL 765

Query: 170  GDGDILCFQKSPPVQCLQQCRCPDVRSFFEYVHNRLVVHFQSLAKPKEDVFCLQL 6
             DGDI+CFQKS      +QCR PDV SF EYVHNR VV F+SL KPKED FCL+L
Sbjct: 766  EDGDIVCFQKSAQDGGGEQCRYPDVPSFLEYVHNRQVVRFRSLEKPKEDEFCLEL 820


>gb|EEC69300.1| hypothetical protein OsI_38365 [Oryza sativa Indica Group]
          Length = 1076

 Score =  165 bits (417), Expect = 4e-39
 Identities = 80/115 (69%), Positives = 94/115 (81%)
 Frame = -2

Query: 350  YVGRLFVKVSGSPYEILTKLNKMAGFSSTQQIELYEELKFEPSVMCVPIHKKLTFRANQL 171
            +VGRLFVK +G P EILTKLN+MAGF+  ++IELYEE+KFEP+VMC  I KKLTFR++QL
Sbjct: 699  FVGRLFVKATGKPSEILTKLNEMAGFAPNEEIELYEEIKFEPNVMCEHIDKKLTFRSSQL 758

Query: 170  GDGDILCFQKSPPVQCLQQCRCPDVRSFFEYVHNRLVVHFQSLAKPKEDVFCLQL 6
             DGDI+CFQKSP +    Q R PDV SF EYVHNR VVHF+SL KPKED FCL+L
Sbjct: 759  EDGDIICFQKSPVLDGETQVRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLEL 813


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