BLASTX nr result

ID: Coptis23_contig00029575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029575
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554958.1| PREDICTED: probable N(2),N(2)-dimethylguanos...    94   2e-17
ref|XP_003554957.1| PREDICTED: probable N(2),N(2)-dimethylguanos...    94   2e-17
ref|XP_002871685.1| hypothetical protein ARALYDRAFT_488427 [Arab...    92   3e-17
ref|XP_003544005.1| PREDICTED: probable N(2),N(2)-dimethylguanos...    91   1e-16
ref|XP_002281380.1| PREDICTED: probable N(2),N(2)-dimethylguanos...    90   2e-16

>ref|XP_003554958.1| PREDICTED: probable N(2),N(2)-dimethylguanosine tRNA
           methyltransferase 1-like isoform 2 [Glycine max]
          Length = 645

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 55/104 (52%), Positives = 64/104 (61%), Gaps = 7/104 (6%)
 Frame = +3

Query: 207 KHQTLN-------QIMSTDPDDYTIIKEGEAEIIMHXXXXXXXXXXXXXXXXXXXEAEII 365
           K QTLN       + MS+D  DY IIKEGEAEI+M                         
Sbjct: 51  KEQTLNLFLHDIGRTMSSDLSDYKIIKEGEAEILM------------------------- 85

Query: 366 MHAKNEVFYNKAQVNNRDMSIAVLRTFLSKRKEEHEAILNKKTE 497
            HAKNEVFYNK QVNNRD+SIAVLRTF+SKRK+EHEA L+K+T+
Sbjct: 86  -HAKNEVFYNKTQVNNRDISIAVLRTFISKRKQEHEAYLSKRTK 128


>ref|XP_003554957.1| PREDICTED: probable N(2),N(2)-dimethylguanosine tRNA
           methyltransferase 1-like isoform 1 [Glycine max]
          Length = 638

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 55/104 (52%), Positives = 64/104 (61%), Gaps = 7/104 (6%)
 Frame = +3

Query: 207 KHQTLN-------QIMSTDPDDYTIIKEGEAEIIMHXXXXXXXXXXXXXXXXXXXEAEII 365
           K QTLN       + MS+D  DY IIKEGEAEI+M                         
Sbjct: 51  KEQTLNLFLHDIGRTMSSDLSDYKIIKEGEAEILM------------------------- 85

Query: 366 MHAKNEVFYNKAQVNNRDMSIAVLRTFLSKRKEEHEAILNKKTE 497
            HAKNEVFYNK QVNNRD+SIAVLRTF+SKRK+EHEA L+K+T+
Sbjct: 86  -HAKNEVFYNKTQVNNRDISIAVLRTFISKRKQEHEAYLSKRTK 128


>ref|XP_002871685.1| hypothetical protein ARALYDRAFT_488427 [Arabidopsis lyrata subsp.
           lyrata] gi|297317522|gb|EFH47944.1| hypothetical protein
           ARALYDRAFT_488427 [Arabidopsis lyrata subsp. lyrata]
          Length = 634

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 49/99 (49%), Positives = 62/99 (62%)
 Frame = +3

Query: 195 SAEGKHQTLNQIMSTDPDDYTIIKEGEAEIIMHXXXXXXXXXXXXXXXXXXXEAEIIMHA 374
           S+  + + L   M TD DDYT+IKEGEAE++M                          H 
Sbjct: 41  SSAPEEKNLRSAMETDLDDYTVIKEGEAEVLM--------------------------HK 74

Query: 375 KNEVFYNKAQVNNRDMSIAVLRTFLSKRKEEHEAILNKK 491
           KN+VF+NKAQVNNRDMSIAVLR F+SKRK+EHEA+L+K+
Sbjct: 75  KNQVFFNKAQVNNRDMSIAVLRAFISKRKQEHEAMLSKR 113


>ref|XP_003544005.1| PREDICTED: probable N(2),N(2)-dimethylguanosine tRNA
           methyltransferase 1-like [Glycine max]
          Length = 582

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/89 (56%), Positives = 58/89 (65%)
 Frame = +3

Query: 231 MSTDPDDYTIIKEGEAEIIMHXXXXXXXXXXXXXXXXXXXEAEIIMHAKNEVFYNKAQVN 410
           MS+D  DY IIKEGEAEI+M                          HAKNEVFYNK QVN
Sbjct: 1   MSSDLSDYKIIKEGEAEILM--------------------------HAKNEVFYNKTQVN 34

Query: 411 NRDMSIAVLRTFLSKRKEEHEAILNKKTE 497
           NRD+SIAVLRTF+SKRK+EHEA L+K+T+
Sbjct: 35  NRDISIAVLRTFISKRKQEHEAYLSKRTK 63


>ref|XP_002281380.1| PREDICTED: probable N(2),N(2)-dimethylguanosine tRNA
           methyltransferase 2 [Vitis vinifera]
           gi|147815608|emb|CAN65976.1| hypothetical protein
           VITISV_036159 [Vitis vinifera]
           gi|298204459|emb|CBI16939.3| unnamed protein product
           [Vitis vinifera]
          Length = 579

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 50/89 (56%), Positives = 58/89 (65%)
 Frame = +3

Query: 231 MSTDPDDYTIIKEGEAEIIMHXXXXXXXXXXXXXXXXXXXEAEIIMHAKNEVFYNKAQVN 410
           MS D  DY+IIKEGEAEI+M                          HAKNEVFYNK QVN
Sbjct: 1   MSIDLSDYSIIKEGEAEILM--------------------------HAKNEVFYNKTQVN 34

Query: 411 NRDMSIAVLRTFLSKRKEEHEAILNKKTE 497
           NRD+SIAVLRTF+SKRK+EHEA L+K+T+
Sbjct: 35  NRDISIAVLRTFISKRKQEHEAKLSKRTK 63


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