BLASTX nr result

ID: Coptis23_contig00029570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029570
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516085.1| calmodulin binding protein, putative [Ricinu...   138   7e-31
emb|CAN83680.1| hypothetical protein VITISV_003845 [Vitis vinifera]   133   2e-29
ref|XP_002279054.1| PREDICTED: uncharacterized protein LOC100254...   132   3e-29
ref|XP_002308551.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_004141323.1| PREDICTED: uncharacterized protein LOC101210...   110   1e-22

>ref|XP_002516085.1| calmodulin binding protein, putative [Ricinus communis]
           gi|223544571|gb|EEF46087.1| calmodulin binding protein,
           putative [Ricinus communis]
          Length = 452

 Score =  138 bits (347), Expect = 7e-31
 Identities = 89/181 (49%), Positives = 106/181 (58%), Gaps = 15/181 (8%)
 Frame = +2

Query: 2   ENRLMEQAHVESSETTPS-KKCDDYL-----RFSEPSSVKVRKNNVTKRISAKPP---VT 154
           E RLMEQ+  + S++TP  K C D L     + SE S VKVRKNNVT RISAKPP   VT
Sbjct: 261 ETRLMEQSQNDPSDSTPPPKSCADSLVMKHSKSSEQSFVKVRKNNVTTRISAKPPIGHVT 320

Query: 155 YSSSGPXXXXXXXXXXXXXXXXXXXXXXX------KTMTKEINNSKPNYMNLTVSVKAKR 316
            SSS P                                T+E  NS+PNYMNLT S KAKR
Sbjct: 321 RSSSSPSSEFRCDESSASSSICTSATPISGNTGLASDRTEESGNSRPNYMNLTESTKAKR 380

Query: 317 RTCNYTPQKSQSQSLDGFQFHKRSETFSNGDNKSNAGSDFSSVNYSKQILLPSRLHKNSM 496
           +  N+   + Q QS+D FQF +RS  FSNGD+KS+AGSD SSVN SK + LP+RL KNSM
Sbjct: 381 KIYNHLSNRIQRQSMDEFQFLRRSAAFSNGDSKSSAGSDPSSVNLSKPLGLPTRLDKNSM 440

Query: 497 R 499
           +
Sbjct: 441 K 441


>emb|CAN83680.1| hypothetical protein VITISV_003845 [Vitis vinifera]
          Length = 992

 Score =  133 bits (334), Expect = 2e-29
 Identities = 88/192 (45%), Positives = 111/192 (57%), Gaps = 17/192 (8%)
 Frame = +2

Query: 2    ENRLMEQAHVESSETTPS-KKCDDYL-----RFSEPSSVKVRKNNVTKRISAKPP----V 151
            ENRLMEQAH + SETTP  K C + L     + SEP SVKVR+NNVT RISAKPP    V
Sbjct: 806  ENRLMEQAHTDPSETTPPFKHCMNPLSGPHSKSSEPGSVKVRRNNVTTRISAKPPPIGLV 865

Query: 152  TYSSSGP------XXXXXXXXXXXXXXXXXXXXXXXKTMTKEINNSKPNYMNLTVSVKAK 313
            T SSS P                                T++ +N +P+YMNLT S KAK
Sbjct: 866  TRSSSSPSSEFQYDESSASSSICTSATPVSGNTVLTSDKTEDSSNYRPSYMNLTESTKAK 925

Query: 314  RRTCNYTPQKSQSQSLDGFQFHKRSETFSNGDNKSNAGSDFSSVNYSKQILLPSRLHKNS 493
            +R+      + Q QS+D FQF K+S  + N D KS+AGSD  SVN+SK + LP+R+ K S
Sbjct: 926  QRS-----HRVQRQSMDEFQFLKKSGVYCNVDTKSSAGSDPPSVNFSKPLYLPTRMDKAS 980

Query: 494  MRDR-NENCYYE 526
            ++ R  ENC+YE
Sbjct: 981  VKVRERENCFYE 992


>ref|XP_002279054.1| PREDICTED: uncharacterized protein LOC100254187 [Vitis vinifera]
          Length = 449

 Score =  132 bits (333), Expect = 3e-29
 Identities = 88/192 (45%), Positives = 111/192 (57%), Gaps = 17/192 (8%)
 Frame = +2

Query: 2   ENRLMEQAHVESSETTPS-KKCDDYL-----RFSEPSSVKVRKNNVTKRISAKPP----V 151
           ENRLMEQAH + SETTP  K C + L     + SEP SVKVR+NNVT RISAKPP    V
Sbjct: 263 ENRLMEQAHTDPSETTPPFKHCMNPLSGTHSKSSEPGSVKVRRNNVTTRISAKPPPIGLV 322

Query: 152 TYSSSGP------XXXXXXXXXXXXXXXXXXXXXXXKTMTKEINNSKPNYMNLTVSVKAK 313
           T SSS P                                T++ +N +P+YMNLT S KAK
Sbjct: 323 TRSSSSPSSEFQYDESSASSSICTSATPVSGNTVLTSDKTEDSSNYRPSYMNLTESTKAK 382

Query: 314 RRTCNYTPQKSQSQSLDGFQFHKRSETFSNGDNKSNAGSDFSSVNYSKQILLPSRLHKNS 493
           +R+      + Q QS+D FQF K+S  + N D KS+AGSD  SVN+SK + LP+R+ K S
Sbjct: 383 QRS-----HRVQRQSMDEFQFLKKSGLYCNVDTKSSAGSDPPSVNFSKPLYLPTRMDKAS 437

Query: 494 MRDR-NENCYYE 526
           ++ R  ENC+YE
Sbjct: 438 VKVRERENCFYE 449


>ref|XP_002308551.1| predicted protein [Populus trichocarpa] gi|222854527|gb|EEE92074.1|
           predicted protein [Populus trichocarpa]
          Length = 421

 Score =  117 bits (293), Expect = 1e-24
 Identities = 74/156 (47%), Positives = 86/156 (55%), Gaps = 12/156 (7%)
 Frame = +2

Query: 2   ENRLMEQAHVESSETTPSKKCDDYLRFS---EPSSVKVRKNNVTKRISAKPP---VTYSS 163
           E RLMEQ H + S T P K C D    S   E SSVKVRKNNVT RISA+PP   VT SS
Sbjct: 263 ETRLMEQTHTDPSVTPPPKSCVDASTHSKSFEQSSVKVRKNNVTTRISARPPIGHVTRSS 322

Query: 164 SGPXXXXXXXXXXXXXXXXXXXXXXX------KTMTKEINNSKPNYMNLTVSVKAKRRTC 325
           S P                                T+E  NS+PNYMNLT S KAK+ T 
Sbjct: 323 SSPSSEVRFDESSASSSICTSTTPISGNTGLASDKTEESGNSRPNYMNLTESTKAKQNTS 382

Query: 326 NYTPQKSQSQSLDGFQFHKRSETFSNGDNKSNAGSD 433
           ++   + Q QS+D FQF K+S  FSNGD+KS+AGSD
Sbjct: 383 SHLFHRIQRQSMDEFQFFKKSAAFSNGDSKSSAGSD 418


>ref|XP_004141323.1| PREDICTED: uncharacterized protein LOC101210019 [Cucumis sativus]
           gi|449524599|ref|XP_004169309.1| PREDICTED:
           uncharacterized LOC101210019 [Cucumis sativus]
          Length = 445

 Score =  110 bits (276), Expect = 1e-22
 Identities = 76/184 (41%), Positives = 104/184 (56%), Gaps = 15/184 (8%)
 Frame = +2

Query: 2   ENRLMEQAHVESSETTP-SKKCDD-----YLRFSEPSSVKVRKNNVTKRISAKPPVT--- 154
           E RLMEQ+  ES + TP SK C +     + + SEP  VKVRKNNV+ RISAKPP +   
Sbjct: 263 ETRLMEQSRTESFDVTPPSKSCIESVVSKHSKGSEPGLVKVRKNNVSTRISAKPPSSGQA 322

Query: 155 YSSSGPXXXXXXXXXXXXXXXXXXXXXXX----KTMTKEINNS--KPNYMNLTVSVKAKR 316
            S S P                            T+ +  N S  +P+YMNLT S KAK+
Sbjct: 323 RSCSSPSSDFWYDESSASSSICTSTTPASGHAFSTIERTENGSYSRPSYMNLTESTKAKQ 382

Query: 317 RTCNYTPQKSQSQSLDGFQFHKRSETFSNGDNKSNAGSDFSSVNYSKQILLPSRLHKNSM 496
           +T ++   + Q QS+D +QF ++S  FSNGD+KS+AGSD SSVN  K +++P+R  KN  
Sbjct: 383 KTNSHLSHRVQRQSMDEYQFLQKSAAFSNGDSKSSAGSD-SSVNPFKPLMMPTRSDKNGT 441

Query: 497 RDRN 508
           + R+
Sbjct: 442 KLRS 445


Top