BLASTX nr result

ID: Coptis23_contig00029553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029553
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32737.3| unnamed protein product [Vitis vinifera]              127   9e-28
ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vi...   127   9e-28
gb|ACI13681.1| putative auxin response factor ARF16 [Malus x dom...   125   3e-27
gb|AEI70250.1| auxin response factor 10 [Solanum lycopersicum]        125   4e-27
ref|NP_001234796.1| auxin response factor 10 [Solanum lycopersic...   125   4e-27

>emb|CBI32737.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  127 bits (319), Expect = 9e-28
 Identities = 58/82 (70%), Positives = 65/82 (79%)
 Frame = +1

Query: 1   LWHACAGGMVNMPPVNSKVYYFPQGQVEHTYGNADFGNSGRIPALVLCRVGGVKFMADPD 180
           LWHACAGGMV MPPVNSKV+YFPQG  EH   + DF N  RIPA + CRV  +KFMADP+
Sbjct: 22  LWHACAGGMVQMPPVNSKVFYFPQGHAEHACASVDFRNYPRIPAYIPCRVSAMKFMADPE 81

Query: 181 TDEVYAKIGLVPLKGNESDYYD 246
           +DEVYAKI LVPL G+ESDY D
Sbjct: 82  SDEVYAKITLVPLNGSESDYDD 103


>ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 701

 Score =  127 bits (319), Expect = 9e-28
 Identities = 58/82 (70%), Positives = 65/82 (79%)
 Frame = +1

Query: 1   LWHACAGGMVNMPPVNSKVYYFPQGQVEHTYGNADFGNSGRIPALVLCRVGGVKFMADPD 180
           LWHACAGGMV MPPVNSKV+YFPQG  EH   + DF N  RIPA + CRV  +KFMADP+
Sbjct: 22  LWHACAGGMVQMPPVNSKVFYFPQGHAEHACASVDFRNYPRIPAYIPCRVSAMKFMADPE 81

Query: 181 TDEVYAKIGLVPLKGNESDYYD 246
           +DEVYAKI LVPL G+ESDY D
Sbjct: 82  SDEVYAKITLVPLNGSESDYDD 103


>gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
          Length = 702

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/82 (69%), Positives = 63/82 (76%)
 Frame = +1

Query: 1   LWHACAGGMVNMPPVNSKVYYFPQGQVEHTYGNADFGNSGRIPALVLCRVGGVKFMADPD 180
           LWHACAGGMV MPPVN+KV+YFPQG  EH  G  DF N  R+PA +LCRV  +KFMADP 
Sbjct: 22  LWHACAGGMVQMPPVNAKVFYFPQGHAEHACGPVDFRNCPRVPAHILCRVAAIKFMADPG 81

Query: 181 TDEVYAKIGLVPLKGNESDYYD 246
           TDEVYAKI LVPL G E+ Y D
Sbjct: 82  TDEVYAKIRLVPLNGAEAGYED 103


>gb|AEI70250.1| auxin response factor 10 [Solanum lycopersicum]
          Length = 699

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/92 (64%), Positives = 73/92 (79%)
 Frame = +1

Query: 1   LWHACAGGMVNMPPVNSKVYYFPQGQVEHTYGNADFGNSGRIPALVLCRVGGVKFMADPD 180
           LWHACAGGMV +PPVNSKVYYFPQG  EHT  N DF    R PAL+LCRV  VKF+ADP+
Sbjct: 13  LWHACAGGMVQIPPVNSKVYYFPQGHAEHTLMNVDFSALPRSPALILCRVAAVKFLADPE 72

Query: 181 TDEVYAKIGLVPLKGNESDYYDGDEEEVIQSN 276
           TDEVYAKI +VP+ GN+ + +D D+++++ SN
Sbjct: 73  TDEVYAKIRVVPV-GNKGNDFD-DDDDILGSN 102


>ref|NP_001234796.1| auxin response factor 10 [Solanum lycopersicum]
           gi|300676100|gb|ADK26472.1| auxin response factor 10
           [Solanum lycopersicum]
          Length = 699

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/92 (64%), Positives = 73/92 (79%)
 Frame = +1

Query: 1   LWHACAGGMVNMPPVNSKVYYFPQGQVEHTYGNADFGNSGRIPALVLCRVGGVKFMADPD 180
           LWHACAGGMV +PPVNSKVYYFPQG  EHT  N DF    R PAL+LCRV  VKF+ADP+
Sbjct: 13  LWHACAGGMVQIPPVNSKVYYFPQGHAEHTLMNVDFSALPRSPALILCRVAAVKFLADPE 72

Query: 181 TDEVYAKIGLVPLKGNESDYYDGDEEEVIQSN 276
           TDEVYAKI +VP+ GN+ + +D D+++++ SN
Sbjct: 73  TDEVYAKIRVVPV-GNKGNDFD-DDDDILGSN 102


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