BLASTX nr result
ID: Coptis23_contig00029553
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00029553 (278 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI32737.3| unnamed protein product [Vitis vinifera] 127 9e-28 ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vi... 127 9e-28 gb|ACI13681.1| putative auxin response factor ARF16 [Malus x dom... 125 3e-27 gb|AEI70250.1| auxin response factor 10 [Solanum lycopersicum] 125 4e-27 ref|NP_001234796.1| auxin response factor 10 [Solanum lycopersic... 125 4e-27 >emb|CBI32737.3| unnamed protein product [Vitis vinifera] Length = 580 Score = 127 bits (319), Expect = 9e-28 Identities = 58/82 (70%), Positives = 65/82 (79%) Frame = +1 Query: 1 LWHACAGGMVNMPPVNSKVYYFPQGQVEHTYGNADFGNSGRIPALVLCRVGGVKFMADPD 180 LWHACAGGMV MPPVNSKV+YFPQG EH + DF N RIPA + CRV +KFMADP+ Sbjct: 22 LWHACAGGMVQMPPVNSKVFYFPQGHAEHACASVDFRNYPRIPAYIPCRVSAMKFMADPE 81 Query: 181 TDEVYAKIGLVPLKGNESDYYD 246 +DEVYAKI LVPL G+ESDY D Sbjct: 82 SDEVYAKITLVPLNGSESDYDD 103 >ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vitis vinifera] Length = 701 Score = 127 bits (319), Expect = 9e-28 Identities = 58/82 (70%), Positives = 65/82 (79%) Frame = +1 Query: 1 LWHACAGGMVNMPPVNSKVYYFPQGQVEHTYGNADFGNSGRIPALVLCRVGGVKFMADPD 180 LWHACAGGMV MPPVNSKV+YFPQG EH + DF N RIPA + CRV +KFMADP+ Sbjct: 22 LWHACAGGMVQMPPVNSKVFYFPQGHAEHACASVDFRNYPRIPAYIPCRVSAMKFMADPE 81 Query: 181 TDEVYAKIGLVPLKGNESDYYD 246 +DEVYAKI LVPL G+ESDY D Sbjct: 82 SDEVYAKITLVPLNGSESDYDD 103 >gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica] Length = 702 Score = 125 bits (315), Expect = 3e-27 Identities = 57/82 (69%), Positives = 63/82 (76%) Frame = +1 Query: 1 LWHACAGGMVNMPPVNSKVYYFPQGQVEHTYGNADFGNSGRIPALVLCRVGGVKFMADPD 180 LWHACAGGMV MPPVN+KV+YFPQG EH G DF N R+PA +LCRV +KFMADP Sbjct: 22 LWHACAGGMVQMPPVNAKVFYFPQGHAEHACGPVDFRNCPRVPAHILCRVAAIKFMADPG 81 Query: 181 TDEVYAKIGLVPLKGNESDYYD 246 TDEVYAKI LVPL G E+ Y D Sbjct: 82 TDEVYAKIRLVPLNGAEAGYED 103 >gb|AEI70250.1| auxin response factor 10 [Solanum lycopersicum] Length = 699 Score = 125 bits (314), Expect = 4e-27 Identities = 59/92 (64%), Positives = 73/92 (79%) Frame = +1 Query: 1 LWHACAGGMVNMPPVNSKVYYFPQGQVEHTYGNADFGNSGRIPALVLCRVGGVKFMADPD 180 LWHACAGGMV +PPVNSKVYYFPQG EHT N DF R PAL+LCRV VKF+ADP+ Sbjct: 13 LWHACAGGMVQIPPVNSKVYYFPQGHAEHTLMNVDFSALPRSPALILCRVAAVKFLADPE 72 Query: 181 TDEVYAKIGLVPLKGNESDYYDGDEEEVIQSN 276 TDEVYAKI +VP+ GN+ + +D D+++++ SN Sbjct: 73 TDEVYAKIRVVPV-GNKGNDFD-DDDDILGSN 102 >ref|NP_001234796.1| auxin response factor 10 [Solanum lycopersicum] gi|300676100|gb|ADK26472.1| auxin response factor 10 [Solanum lycopersicum] Length = 699 Score = 125 bits (314), Expect = 4e-27 Identities = 59/92 (64%), Positives = 73/92 (79%) Frame = +1 Query: 1 LWHACAGGMVNMPPVNSKVYYFPQGQVEHTYGNADFGNSGRIPALVLCRVGGVKFMADPD 180 LWHACAGGMV +PPVNSKVYYFPQG EHT N DF R PAL+LCRV VKF+ADP+ Sbjct: 13 LWHACAGGMVQIPPVNSKVYYFPQGHAEHTLMNVDFSALPRSPALILCRVAAVKFLADPE 72 Query: 181 TDEVYAKIGLVPLKGNESDYYDGDEEEVIQSN 276 TDEVYAKI +VP+ GN+ + +D D+++++ SN Sbjct: 73 TDEVYAKIRVVPV-GNKGNDFD-DDDDILGSN 102