BLASTX nr result

ID: Coptis23_contig00029538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029538
         (1894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330316.1| predicted protein [Populus trichocarpa] gi|2...   596   e-168
ref|XP_002281840.1| PREDICTED: armadillo repeat-containing prote...   593   e-167
ref|XP_004165806.1| PREDICTED: armadillo repeat-containing prote...   574   e-161
ref|XP_004136992.1| PREDICTED: armadillo repeat-containing prote...   574   e-161
gb|ACJ85697.1| unknown [Medicago truncatula] gi|388518985|gb|AFK...   573   e-161

>ref|XP_002330316.1| predicted protein [Populus trichocarpa] gi|222871351|gb|EEF08482.1|
            predicted protein [Populus trichocarpa]
          Length = 461

 Score =  596 bits (1537), Expect = e-168
 Identities = 304/462 (65%), Positives = 385/462 (83%), Gaps = 1/462 (0%)
 Frame = -3

Query: 1820 MGPLKNNNKRTISQEAFEVLVKENIEDLDMDPNEALQDAIHTLTLQGVDLSGIVTCIPGV 1641
            MGP  + N RTISQEAF+ LVKENIEDL +DP EAL+DAI TLTLQGVDLSGIVTC+PG 
Sbjct: 1    MGP-PSKNVRTISQEAFDELVKENIEDLGLDPTEALEDAIQTLTLQGVDLSGIVTCVPGE 59

Query: 1640 TSVNDNPVIQCLDQLKESVDHNDTNLEEIVNVLDDLCNLCSVQDSSSNVSIAMRNGGLDL 1461
             +V +NPVI+CL++LKE +  +D +L+E+V +LD+L  L +  + S NV+I +RNGGL+L
Sbjct: 60   GNVRENPVIKCLERLKE-LGFDDDDLDEMVGLLDELVGLFTGVEGSGNVAIGVRNGGLEL 118

Query: 1460 LISICSKFKL-RQRVLVSAFKAMSVLITDIQSTEIFRKNDGPKIVMNILSECSEKIDVVN 1284
            + SICS   +  ++VLVSA K +++LI D+QSTE+FR +DGPK+V+ IL   SE ++V+N
Sbjct: 119  VCSICSNIPIVSEKVLVSALKTLALLIHDVQSTEMFRSSDGPKMVVGILKGGSESLEVLN 178

Query: 1283 SGFAVVAAAATGNEVVKDLFMDLKVDELLVQILGGKNKDGLRHPYDAIRVLLTADDGRVL 1104
            +GFAVVAAAATGNEVVK+L ++LK+DEL++++L  ++K  ++  YD+IRVLLT DD RV+
Sbjct: 179  TGFAVVAAAATGNEVVKELLIELKIDELILEVLNRQSKGIIQGLYDSIRVLLTPDDNRVV 238

Query: 1103 ASQVYGYARTFAKIGIAEALVGALHQGISSPNLISATIALKAVAVNDEICRSIADNGGVD 924
            ASQVYGYAR FAKIGIA ALV +L  G++SP+L+SA+IALKAVAVNDEIC+SIA++GG+D
Sbjct: 239  ASQVYGYARRFAKIGIARALVESLRSGLTSPSLVSASIALKAVAVNDEICKSIAESGGID 298

Query: 923  AVLKCIDDSGEQSNSAVARACCSLLSKLAGSDANKSSIVQKGGMDRLIKLSCRLSEDPSV 744
             + KCIDDSGE  N  VARACCSLLSKLAGSD+NKS+IV+K GM++LI+L+ R S+DPSV
Sbjct: 299  VIFKCIDDSGEHGNKIVARACCSLLSKLAGSDSNKSAIVEKEGMNKLIQLAARFSDDPSV 358

Query: 743  LQEIMSIICTLSLRSPGNAASAVEAGAGDFAIQAMQKFPAAPQMQKQSCLMIRNLVVRNP 564
            LQE+MSI   L LRSP NAA A+EAGAGD AIQAM+KF    Q+Q+ SCLMIRNLV RNP
Sbjct: 359  LQEVMSIFTVLCLRSPDNAARAMEAGAGDLAIQAMEKFSNVQQLQRSSCLMIRNLVARNP 418

Query: 563  ENRSILLGNGIEKIIRKAKENHESCKDAATDALRDLGLDNYN 438
            ENR++LL +GIEKIIR+AK NHE+CKDAATDALRDLGLDNYN
Sbjct: 419  ENRTLLLSHGIEKIIRRAKVNHETCKDAATDALRDLGLDNYN 460


>ref|XP_002281840.1| PREDICTED: armadillo repeat-containing protein 6 [Vitis vinifera]
            gi|297741329|emb|CBI32460.3| unnamed protein product
            [Vitis vinifera]
          Length = 460

 Score =  593 bits (1529), Expect = e-167
 Identities = 308/455 (67%), Positives = 372/455 (81%), Gaps = 3/455 (0%)
 Frame = -3

Query: 1793 RTISQEAFEVLVKENIEDLDMDPNEALQDAIHTLTLQGVDLSGIVTCIPGVTSVNDNPVI 1614
            RTISQ AF+ LV+EN+EDL M+P EAL+DA+ TLTLQGVDLSGIV C+PG  SV DNPVI
Sbjct: 8    RTISQAAFDELVRENMEDLGMEPAEALEDALQTLTLQGVDLSGIVACVPGDGSVGDNPVI 67

Query: 1613 QCLDQLKESVDHNDTNLEEIVNVLDDLCNLCSVQDSSSNVSIAMRNGGLDLLISICSKFK 1434
            Q LD+LK+ +D +     E+V V D L  LCS++  S N +IA RNGG++++ S+CSK +
Sbjct: 68   QSLDRLKQ-LDSDWVGFGEMVEVFDKLTELCSIE-GSDNAAIATRNGGVEVVCSVCSKIR 125

Query: 1433 LR---QRVLVSAFKAMSVLITDIQSTEIFRKNDGPKIVMNILSECSEKIDVVNSGFAVVA 1263
            +      VLVS    M+ L+ D+QSTE F+K  GPKIV+ +L++ S+ +D++NSGF+VVA
Sbjct: 126  VGCEGDSVLVSGLTTMASLLHDVQSTETFQKIGGPKIVVGVLNDASQNVDILNSGFSVVA 185

Query: 1262 AAATGNEVVKDLFMDLKVDELLVQILGGKNKDGLRHPYDAIRVLLTADDGRVLASQVYGY 1083
            AAATGNE++K+ FMDL++DEL++QI+    +  +   YDAI VLLT DD RV+ASQVYGY
Sbjct: 186  AAATGNEILKESFMDLQIDELIIQIMKSHGRGRVHSIYDAICVLLTPDDNRVVASQVYGY 245

Query: 1082 ARTFAKIGIAEALVGALHQGISSPNLISATIALKAVAVNDEICRSIADNGGVDAVLKCID 903
            AR FAK GIA ALV +L +G+ SP+L+SA+IALKAVAVNDEIC+SIA++GG+DAVL+CID
Sbjct: 246  ARRFAKAGIAGALVESLGEGLRSPSLVSASIALKAVAVNDEICKSIAESGGIDAVLRCID 305

Query: 902  DSGEQSNSAVARACCSLLSKLAGSDANKSSIVQKGGMDRLIKLSCRLSEDPSVLQEIMSI 723
            DSGEQ N  VARACCSLLSKLAGSDANKS+IV+KGGMDRLIKLS R S+DPSVLQE+M I
Sbjct: 306  DSGEQGNKTVARACCSLLSKLAGSDANKSTIVEKGGMDRLIKLSARFSDDPSVLQEVMPI 365

Query: 722  ICTLSLRSPGNAASAVEAGAGDFAIQAMQKFPAAPQMQKQSCLMIRNLVVRNPENRSILL 543
             C LSLRSP NAA AVEAGAGD AIQAMQKFPAA QMQ+ SCLMIRNLVVRN ENR++LL
Sbjct: 366  FCVLSLRSPDNAARAVEAGAGDLAIQAMQKFPAAQQMQRNSCLMIRNLVVRNQENRTLLL 425

Query: 542  GNGIEKIIRKAKENHESCKDAATDALRDLGLDNYN 438
             NGIEKIIRKAKENHESCKDAA DALRDLGLD YN
Sbjct: 426  SNGIEKIIRKAKENHESCKDAANDALRDLGLD-YN 459


>ref|XP_004165806.1| PREDICTED: armadillo repeat-containing protein 6-like [Cucumis
            sativus]
          Length = 465

 Score =  574 bits (1480), Expect = e-161
 Identities = 297/466 (63%), Positives = 372/466 (79%), Gaps = 6/466 (1%)
 Frame = -3

Query: 1820 MGPLKNNNKRTISQEAFEVLVKENIEDLDMDPNEALQDAIHTLTLQGVDLSGIVTCIPGV 1641
            MGP K    RTISQEAF+ +V+EN+EDL MDP EALQDAI TLTLQGVDLSGIV C+PG 
Sbjct: 1    MGPPKT--LRTISQEAFDEVVRENVEDLGMDPTEALQDAIETLTLQGVDLSGIVRCVPGE 58

Query: 1640 TSVNDNPVIQCLDQLKE----SVDH-NDTNLEEIVNVLDDLCNLCSVQDSSSNVSIAMRN 1476
             S  DNP+IQ L++LK+    S D  +D  ++EIV + D + +LC     S N SIA+RN
Sbjct: 59   GSARDNPLIQSLERLKQLDGDSKDKISDQFVDEIVVLFDRISDLCGSTQESGNASIALRN 118

Query: 1475 GGLDLLISICSKFKLR-QRVLVSAFKAMSVLITDIQSTEIFRKNDGPKIVMNILSECSEK 1299
            GGL+LL S+C K     +  +VS+ K M +L+ D+ STEIFR ++GP+IVM+IL+   + 
Sbjct: 119  GGLELLCSLCYKIPSDCEPAVVSSLKTMVLLLQDLHSTEIFRNSNGPRIVMDILNSGKQN 178

Query: 1298 IDVVNSGFAVVAAAATGNEVVKDLFMDLKVDELLVQILGGKNKDGLRHPYDAIRVLLTAD 1119
            ++++  GFAVVAAAAT NEVVK++FM++ +DEL++Q L     D +   YDAIRVLLTAD
Sbjct: 179  VNILYGGFAVVAAAATANEVVKEVFMEMNIDELILQTLSTYRGDCINSLYDAIRVLLTAD 238

Query: 1118 DGRVLASQVYGYARTFAKIGIAEALVGALHQGISSPNLISATIALKAVAVNDEICRSIAD 939
            D RV+ASQVYGYAR FAKIGIA ALV +LH+G++S  L+SA IAL+AV+VNDEIC+SIA+
Sbjct: 239  DHRVVASQVYGYARRFAKIGIANALVDSLHEGLNSAGLVSACIALRAVSVNDEICKSIAE 298

Query: 938  NGGVDAVLKCIDDSGEQSNSAVARACCSLLSKLAGSDANKSSIVQKGGMDRLIKLSCRLS 759
            NGG+DAVL+CIDDSG+Q N  VA+ CCSLLSKLAGSDANKS+I++K G+++LIKLS R S
Sbjct: 299  NGGIDAVLRCIDDSGDQGNKMVAKVCCSLLSKLAGSDANKSAIIEKKGLNKLIKLSSRFS 358

Query: 758  EDPSVLQEIMSIICTLSLRSPGNAASAVEAGAGDFAIQAMQKFPAAPQMQKQSCLMIRNL 579
            +DPSVLQE+M+++  L+LRSP NA  A+EAGAGD AIQAMQKFP+A QMQ+ SC MIRNL
Sbjct: 359  DDPSVLQEVMAVVSVLTLRSPENATQAIEAGAGDLAIQAMQKFPSAQQMQRNSCNMIRNL 418

Query: 578  VVRNPENRSILLGNGIEKIIRKAKENHESCKDAATDALRDLGLDNY 441
            VVRNPENR++LL  GIEK IRKAK+NHESCKDAA+DALRDLGLDNY
Sbjct: 419  VVRNPENRALLLKTGIEKYIRKAKQNHESCKDAASDALRDLGLDNY 464


>ref|XP_004136992.1| PREDICTED: armadillo repeat-containing protein 6-like [Cucumis
            sativus]
          Length = 465

 Score =  574 bits (1480), Expect = e-161
 Identities = 297/466 (63%), Positives = 372/466 (79%), Gaps = 6/466 (1%)
 Frame = -3

Query: 1820 MGPLKNNNKRTISQEAFEVLVKENIEDLDMDPNEALQDAIHTLTLQGVDLSGIVTCIPGV 1641
            MGP K    RTISQEAF+ +V+EN+EDL MDP EALQDAI TLTLQGVDLSGIV C+PG 
Sbjct: 1    MGPPKT--LRTISQEAFDEVVRENVEDLGMDPTEALQDAIETLTLQGVDLSGIVRCVPGE 58

Query: 1640 TSVNDNPVIQCLDQLKE----SVDH-NDTNLEEIVNVLDDLCNLCSVQDSSSNVSIAMRN 1476
             S  DNP+IQ L++LK+    S D  +D  ++EIV + D + +LC     S N SIA+RN
Sbjct: 59   GSARDNPLIQSLERLKQLDGDSKDKISDQFVDEIVVLFDRISDLCGSTQESGNASIALRN 118

Query: 1475 GGLDLLISICSKFKLR-QRVLVSAFKAMSVLITDIQSTEIFRKNDGPKIVMNILSECSEK 1299
            GGL+LL S+C K     +  +VS+ K M +L+ D+ STEIFR ++GP+IVM+IL+   + 
Sbjct: 119  GGLELLCSLCYKIPSDCEPAVVSSLKTMVLLLQDLHSTEIFRNSNGPRIVMDILNSGKQN 178

Query: 1298 IDVVNSGFAVVAAAATGNEVVKDLFMDLKVDELLVQILGGKNKDGLRHPYDAIRVLLTAD 1119
            ++++  GFAVVAAAAT NEVVK++FM++ +DEL++Q L     D +   YDAIRVLLTAD
Sbjct: 179  VNILYGGFAVVAAAATANEVVKEVFMEMNIDELILQTLSTYRGDCINSLYDAIRVLLTAD 238

Query: 1118 DGRVLASQVYGYARTFAKIGIAEALVGALHQGISSPNLISATIALKAVAVNDEICRSIAD 939
            D RV+ASQVYGYAR FAKIGIA ALV +LH+G++S  L+SA IAL+AV+VNDEIC+SIA+
Sbjct: 239  DHRVVASQVYGYARRFAKIGIANALVDSLHEGLNSSGLVSACIALRAVSVNDEICKSIAE 298

Query: 938  NGGVDAVLKCIDDSGEQSNSAVARACCSLLSKLAGSDANKSSIVQKGGMDRLIKLSCRLS 759
            NGG+DAVL+CIDDSG+Q N  VA+ CCSLLSKLAGSDANKS+I++K G+++LIKLS R S
Sbjct: 299  NGGIDAVLRCIDDSGDQGNKMVAKVCCSLLSKLAGSDANKSAIIEKKGLNKLIKLSSRFS 358

Query: 758  EDPSVLQEIMSIICTLSLRSPGNAASAVEAGAGDFAIQAMQKFPAAPQMQKQSCLMIRNL 579
            +DPSVLQE+M+++  L+LRSP NA  A+EAGAGD AIQAMQKFP+A QMQ+ SC MIRNL
Sbjct: 359  DDPSVLQEVMAVVSVLTLRSPENATQAIEAGAGDLAIQAMQKFPSAQQMQRNSCNMIRNL 418

Query: 578  VVRNPENRSILLGNGIEKIIRKAKENHESCKDAATDALRDLGLDNY 441
            VVRNPENR++LL  GIEK IRKAK+NHESCKDAA+DALRDLGLDNY
Sbjct: 419  VVRNPENRALLLKTGIEKYIRKAKQNHESCKDAASDALRDLGLDNY 464


>gb|ACJ85697.1| unknown [Medicago truncatula] gi|388518985|gb|AFK47554.1| unknown
            [Medicago truncatula]
          Length = 459

 Score =  573 bits (1478), Expect = e-161
 Identities = 296/456 (64%), Positives = 363/456 (79%), Gaps = 3/456 (0%)
 Frame = -3

Query: 1793 RTISQEAFEVLVKENIEDLDMDPNEALQDAIHTLTLQGVDLSGIVTCIPGVTSVNDNPVI 1614
            R +SQEAF  LV ENI DL+MDP EALQDAI TLTLQGVDLSGIVT +PG      NPVI
Sbjct: 9    RAVSQEAFNDLVFENINDLEMDPTEALQDAIQTLTLQGVDLSGIVTSLPG----ESNPVI 64

Query: 1613 QCLDQLKESVDHNDTNLEEIVNVLDDLCNLCSVQDSSSNVSIAMRNGGLDLLISICSKFK 1434
            +CL++LK+  ++ D  L+EIV V D L  LC  +D + N +IA +NGG++L+  +  K +
Sbjct: 65   ECLEKLKQ-FENEDITLDEIVEVFDKLVELCGGEDGNGNAAIATKNGGVELVCGVFEKIR 123

Query: 1433 LRQR---VLVSAFKAMSVLITDIQSTEIFRKNDGPKIVMNILSECSEKIDVVNSGFAVVA 1263
                   VLVS   A+++L+ D+QST  F+ ++GP+I++ I+++  + IDV+NS F VVA
Sbjct: 124  SSDGSRVVLVSGLNALALLLHDVQSTGTFQNSNGPRIIIGIINDNKQNIDVLNSSFRVVA 183

Query: 1262 AAATGNEVVKDLFMDLKVDELLVQILGGKNKDGLRHPYDAIRVLLTADDGRVLASQVYGY 1083
            +AATG+E+VKD FM+LKVDEL+V+I+      G++  YDAIRVLLT DD RVLASQVYGY
Sbjct: 184  SAATGDEIVKDSFMELKVDELIVEIMSVHKNPGIQSLYDAIRVLLTPDDNRVLASQVYGY 243

Query: 1082 ARTFAKIGIAEALVGALHQGISSPNLISATIALKAVAVNDEICRSIADNGGVDAVLKCID 903
            AR FAKIGI +ALV +LH G+SSP+L+SA I LKA AVNDEIC+SIA+ GG+D VLKCID
Sbjct: 244  ARKFAKIGITDALVDSLHTGLSSPDLVSACITLKATAVNDEICKSIAEKGGIDVVLKCID 303

Query: 902  DSGEQSNSAVARACCSLLSKLAGSDANKSSIVQKGGMDRLIKLSCRLSEDPSVLQEIMSI 723
            DSGEQ N+ VA+ CCSLLSKLAGSDANKS+IV KGGMD+LIKLS R ++DP+VLQEIMSI
Sbjct: 304  DSGEQGNTDVAKVCCSLLSKLAGSDANKSAIVGKGGMDKLIKLSARYADDPTVLQEIMSI 363

Query: 722  ICTLSLRSPGNAASAVEAGAGDFAIQAMQKFPAAPQMQKQSCLMIRNLVVRNPENRSILL 543
            I  LSLRSP NAA A+EAGAGD AIQAMQKFPAA QMQ+ SCLMIRNLV RNPENR+ILL
Sbjct: 364  ISVLSLRSPENAARAIEAGAGDLAIQAMQKFPAAHQMQRNSCLMIRNLVARNPENRTILL 423

Query: 542  GNGIEKIIRKAKENHESCKDAATDALRDLGLDNYNV 435
             NGIEK IRKAK+ H +CK+AATDALRDLGLD+YN+
Sbjct: 424  NNGIEKHIRKAKQTHANCKEAATDALRDLGLDSYNL 459


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