BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029515
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15551.3| unnamed protein product [Vitis vinifera]              219   2e-55
ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containi...   219   2e-55
ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containi...   204   8e-51
ref|NP_192184.1| pentatricopeptide repeat-containing protein [Ar...   202   3e-50
ref|XP_002872815.1| pentatricopeptide repeat-containing protein ...   200   9e-50

>emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  219 bits (557), Expect = 2e-55
 Identities = 103/138 (74%), Positives = 123/138 (89%)
 Frame = -2

Query: 416 EAMPCQNASSWNTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALR 237
           EAMPCQN SSWNTMITGYAQ+G+I  AR+ F+ MP+RDSISW+AIIAGYAQSG+ EEAL 
Sbjct: 240 EAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALH 299

Query: 236 LFIELKRDGERMNRSTFTSALSTCADMAALEFGKQVHGRLVKAGYEMGDYVGNALVLMYG 57
           LF+E+KRDGER+NRSTFTS LSTCA++AALE GKQVHGR+VKAG E G YVGNAL++MY 
Sbjct: 300 LFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYC 359

Query: 56  KCGSVEEAYDVFESIQEK 3
           KCG++++AY VFE I+EK
Sbjct: 360 KCGNIDDAYIVFEGIEEK 377



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/133 (32%), Positives = 74/133 (55%)
 Frame = -2

Query: 416 EAMPCQNASSWNTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALR 237
           + MP ++  SWN M++GYAQ+G +  A+++F+EMP ++SISW+ ++A Y Q+G  E+A R
Sbjct: 54  DQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARR 113

Query: 236 LFIELKRDGERMNRSTFTSALSTCADMAALEFGKQVHGRLVKAGYEMGDYVGNALVLMYG 57
           LF E K D E +   ++   +        L   + +  R+     E  +   N ++  Y 
Sbjct: 114 LF-ESKADWELI---SWNCMMGGYVKRNRLVDARGIFDRMP----ERDEVSWNTMISGYA 165

Query: 56  KCGSVEEAYDVFE 18
           + G + EA  +FE
Sbjct: 166 QNGELLEAQRLFE 178



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 31/166 (18%)
 Frame = -2

Query: 416 EAMPCQNASSWNTMITGYAQSGEI------------------NC-------------ARD 330
           + MPC+N+ SWN M+  Y Q+G I                  NC             AR 
Sbjct: 85  DEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARG 144

Query: 329 LFNEMPKRDSISWSAIIAGYAQSGHSEEALRLFIELKRDGERMNRSTFTSALSTCADMAA 150
           +F+ MP+RD +SW+ +I+GYAQ+G   EA RLF     +    +  T+T+ +S       
Sbjct: 145 IFDRMPERDEVSWNTMISGYAQNGELLEAQRLF----EESPVRDVFTWTAMVSGYVQNGM 200

Query: 149 LEFGKQVHGRLVKAGYEMGDYVGNALVLMYGKCGSVEEAYDVFESI 12
           L+  ++V   +     E      NA++  Y +C  +++A ++FE++
Sbjct: 201 LDEARRVFDGMP----EKNSVSWNAIIAGYVQCKRMDQARELFEAM 242



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/125 (24%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
 Frame = -2

Query: 383 NTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALRLFIELKRDGER 204
           N ++  Y + G I+ A  +F  + +++ +SW+ +IAGYA+ G  +EAL LF  +K+ G  
Sbjct: 352 NALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGIL 411

Query: 203 MNRSTFTSALSTCADMAALEFGKQVHGRLVK-AGYEMGDYVGNALVLMYGKCGSVEEAYD 27
            +  T    LS C+    ++ G +    + +  G          ++ + G+ G +++A +
Sbjct: 412 PDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQN 471

Query: 26  VFESI 12
           + +++
Sbjct: 472 LMKNM 476


>ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  219 bits (557), Expect = 2e-55
 Identities = 103/138 (74%), Positives = 123/138 (89%)
 Frame = -2

Query: 416 EAMPCQNASSWNTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALR 237
           EAMPCQN SSWNTMITGYAQ+G+I  AR+ F+ MP+RDSISW+AIIAGYAQSG+ EEAL 
Sbjct: 321 EAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALH 380

Query: 236 LFIELKRDGERMNRSTFTSALSTCADMAALEFGKQVHGRLVKAGYEMGDYVGNALVLMYG 57
           LF+E+KRDGER+NRSTFTS LSTCA++AALE GKQVHGR+VKAG E G YVGNAL++MY 
Sbjct: 381 LFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYC 440

Query: 56  KCGSVEEAYDVFESIQEK 3
           KCG++++AY VFE I+EK
Sbjct: 441 KCGNIDDAYIVFEGIEEK 458



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/133 (32%), Positives = 74/133 (55%)
 Frame = -2

Query: 416 EAMPCQNASSWNTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALR 237
           + MP ++  SWN M++GYAQ+G +  A+++F+EMP ++SISW+ ++A Y Q+G  E+A R
Sbjct: 135 DQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARR 194

Query: 236 LFIELKRDGERMNRSTFTSALSTCADMAALEFGKQVHGRLVKAGYEMGDYVGNALVLMYG 57
           LF E K D E +   ++   +        L   + +  R+     E  +   N ++  Y 
Sbjct: 195 LF-ESKADWELI---SWNCMMGGYVKRNRLVDARGIFDRMP----ERDEVSWNTMISGYA 246

Query: 56  KCGSVEEAYDVFE 18
           + G + EA  +FE
Sbjct: 247 QNGELLEAQRLFE 259



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 31/166 (18%)
 Frame = -2

Query: 416 EAMPCQNASSWNTMITGYAQSGEI------------------NC-------------ARD 330
           + MPC+N+ SWN M+  Y Q+G I                  NC             AR 
Sbjct: 166 DEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARG 225

Query: 329 LFNEMPKRDSISWSAIIAGYAQSGHSEEALRLFIELKRDGERMNRSTFTSALSTCADMAA 150
           +F+ MP+RD +SW+ +I+GYAQ+G   EA RLF     +    +  T+T+ +S       
Sbjct: 226 IFDRMPERDEVSWNTMISGYAQNGELLEAQRLF----EESPVRDVFTWTAMVSGYVQNGM 281

Query: 149 LEFGKQVHGRLVKAGYEMGDYVGNALVLMYGKCGSVEEAYDVFESI 12
           L+  ++V   +     E      NA++  Y +C  +++A ++FE++
Sbjct: 282 LDEARRVFDGMP----EKNSVSWNAIIAGYVQCKRMDQARELFEAM 323



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/138 (29%), Positives = 77/138 (55%)
 Frame = -2

Query: 416 EAMPCQNASSWNTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALR 237
           E MP ++  SWN MI+G  +   +  AR LF++MP+RD +SW+A+++GYAQ+G+ +EA  
Sbjct: 104 EKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKE 163

Query: 236 LFIELKRDGERMNRSTFTSALSTCADMAALEFGKQVHGRLVKAGYEMGDYVGNALVLMYG 57
           +F E+       N  ++   L+       +E  +++     KA +E+  +  N ++  Y 
Sbjct: 164 IFDEM----PCKNSISWNGMLAAYVQNGRIEDARRLFES--KADWELISW--NCMMGGYV 215

Query: 56  KCGSVEEAYDVFESIQEK 3
           K   + +A  +F+ + E+
Sbjct: 216 KRNRLVDARGIFDRMPER 233



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/125 (24%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
 Frame = -2

Query: 383 NTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALRLFIELKRDGER 204
           N ++  Y + G I+ A  +F  + +++ +SW+ +IAGYA+ G  +EAL LF  +K+ G  
Sbjct: 433 NALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGIL 492

Query: 203 MNRSTFTSALSTCADMAALEFGKQVHGRLVK-AGYEMGDYVGNALVLMYGKCGSVEEAYD 27
            +  T    LS C+    ++ G +    + +  G          ++ + G+ G +++A +
Sbjct: 493 PDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQN 552

Query: 26  VFESI 12
           + +++
Sbjct: 553 LMKNM 557


>ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  204 bits (518), Expect = 8e-51
 Identities = 97/138 (70%), Positives = 117/138 (84%)
 Frame = -2

Query: 416 EAMPCQNASSWNTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALR 237
           EAMPC+N SSWNTMITGY Q+G I  AR LF+ MP+RD +SW+AII+GYAQ+GH EEAL 
Sbjct: 318 EAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALN 377

Query: 236 LFIELKRDGERMNRSTFTSALSTCADMAALEFGKQVHGRLVKAGYEMGDYVGNALVLMYG 57
           +F+E+KRDGE  NRSTF+ ALSTCAD+AALE GKQVHG++VKAG+E G +VGNAL+ MY 
Sbjct: 378 MFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYF 437

Query: 56  KCGSVEEAYDVFESIQEK 3
           KCGS +EA DVFE I+EK
Sbjct: 438 KCGSTDEANDVFEGIEEK 455



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/139 (31%), Positives = 79/139 (56%), Gaps = 1/139 (0%)
 Frame = -2

Query: 416 EAMPCQNASSWNTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALR 237
           + MP ++  SWNTMI+GYAQ G+++ A+ LFNE P RD  +W+A+++GY Q+G  +EA +
Sbjct: 225 DRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARK 284

Query: 236 LFIELKRDGERMNRSTFTSALSTCADMAALEFGKQV-HGRLVKAGYEMGDYVGNALVLMY 60
            F E+       N  ++ + L+       +++ K V  G L +A         N ++  Y
Sbjct: 285 YFDEM----PVKNEISYNAMLA-----GYVQYKKMVIAGELFEAMPCRNISSWNTMITGY 335

Query: 59  GKCGSVEEAYDVFESIQEK 3
           G+ G + +A  +F+ + ++
Sbjct: 336 GQNGGIAQARKLFDMMPQR 354



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 30/62 (48%), Positives = 47/62 (75%)
 Frame = -2

Query: 416 EAMPCQNASSWNTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALR 237
           + MP ++  SWN M++GYAQ+G ++ AR++FN+MP R+SISW+ ++A Y  +G  +EA R
Sbjct: 132 DLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARR 191

Query: 236 LF 231
           LF
Sbjct: 192 LF 193



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
 Frame = -2

Query: 413 AMPCQNASSWNTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALRL 234
           +MP +++ S+N MI+GY ++ + + ARDLF++MP+RD  SW+ ++ GY ++    EA +L
Sbjct: 71  SMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKL 130

Query: 233 F-IELKRDGERMNRSTFTSALSTCADMAALEFGKQVHGRLVKAGYEMGDYVGNALVLMYG 57
           F +  K+D    N      A +   D A   F K  H   +           N L+  Y 
Sbjct: 131 FDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSIS---------WNGLLAAYV 181

Query: 56  KCGSVEEAYDVFES 15
             G ++EA  +FES
Sbjct: 182 HNGRLKEARRLFES 195



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
 Frame = -2

Query: 416 EAMPCQNASSWNTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALR 237
           + MP ++  SWN M+TGY ++  +  A  LF+ MPK+D +SW+A+++GYAQ+G  +EA  
Sbjct: 101 DKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEARE 160

Query: 236 LFIELKRDGERMNRSTFTSALSTCADMAALE-----FGKQVHGRLVKAGYEMGDYV 84
           +F ++       N  ++   L+       L+     F  Q +  L+     MG YV
Sbjct: 161 VFNKM----PHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYV 212



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/55 (49%), Positives = 36/55 (65%)
 Frame = -2

Query: 389 SWNTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALRLFIE 225
           SWN ++ GY +   +  AR LF+ MP RD ISW+ +I+GYAQ G   +A RLF E
Sbjct: 203 SWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNE 257



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/125 (24%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
 Frame = -2

Query: 383 NTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALRLFIELKRDGER 204
           N ++  Y + G  + A D+F  + ++D +SW+ +IAGYA+ G   +AL LF  +K+ G +
Sbjct: 430 NALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVK 489

Query: 203 MNRSTFTSALSTCADMAALEFGKQVHGRLVK-AGYEMGDYVGNALVLMYGKCGSVEEAYD 27
            +  T    LS C+    ++ G +    + +    +        ++ + G+ G +EEA +
Sbjct: 490 PDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAEN 549

Query: 26  VFESI 12
           +  ++
Sbjct: 550 LMRNM 554


>ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g02750 gi|4263522|gb|AAD15348.1| hypothetical protein
           [Arabidopsis thaliana] gi|7269760|emb|CAB77760.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332656824|gb|AEE82224.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  202 bits (513), Expect = 3e-50
 Identities = 92/138 (66%), Positives = 121/138 (87%)
 Frame = -2

Query: 416 EAMPCQNASSWNTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALR 237
           + MPC+N S+WNTMITGYAQ G+I+ A++LF++MPKRD +SW+A+IAGY+QSGHS EALR
Sbjct: 336 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALR 395

Query: 236 LFIELKRDGERMNRSTFTSALSTCADMAALEFGKQVHGRLVKAGYEMGDYVGNALVLMYG 57
           LF++++R+G R+NRS+F+SALSTCAD+ ALE GKQ+HGRLVK GYE G +VGNAL+LMY 
Sbjct: 396 LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 455

Query: 56  KCGSVEEAYDVFESIQEK 3
           KCGS+EEA D+F+ +  K
Sbjct: 456 KCGSIEEANDLFKEMAGK 473



 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 42/138 (30%), Positives = 77/138 (55%)
 Frame = -2

Query: 416 EAMPCQNASSWNTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALR 237
           ++M  ++  SWNT+ITGYAQSG+I+ AR LF+E P +D  +W+A+++GY Q+   EEA  
Sbjct: 243 DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARE 302

Query: 236 LFIELKRDGERMNRSTFTSALSTCADMAALEFGKQVHGRLVKAGYEMGDYVGNALVLMYG 57
           LF ++       N  ++ + L+       +E  K++   +            N ++  Y 
Sbjct: 303 LFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS----TWNTMITGYA 354

Query: 56  KCGSVEEAYDVFESIQEK 3
           +CG + EA ++F+ + ++
Sbjct: 355 QCGKISEAKNLFDKMPKR 372



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
 Frame = -2

Query: 416 EAMPCQNASSWNTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALR 237
           E MP ++  SWNTM++GYAQ+G ++ AR +F+ MP+++ +SW+A+++ Y Q+   EEA  
Sbjct: 150 EIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACM 209

Query: 236 LFIELKRDGERMNRSTFTSALSTCADMAALEFGKQVHGRLVKAGYEMGDYVG-NALVLMY 60
           LF          +R  +      C     ++  K V  R       + D V  N ++  Y
Sbjct: 210 LF---------KSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGY 260

Query: 59  GKCGSVEEAYDVFE 18
            + G ++EA  +F+
Sbjct: 261 AQSGKIDEARQLFD 274



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/125 (30%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
 Frame = -2

Query: 383 NTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALRLFIELKRDGER 204
           N ++  Y + G I  A DLF EM  +D +SW+ +IAGY++ G  E ALR F  +KR+G +
Sbjct: 448 NALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLK 507

Query: 203 MNRSTFTSALSTCADMAALEFGKQVHGRLVK-AGYEMGDYVGNALVLMYGKCGSVEEAYD 27
            + +T  + LS C+    ++ G+Q    + +  G          +V + G+ G +E+A++
Sbjct: 508 PDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHN 567

Query: 26  VFESI 12
           + +++
Sbjct: 568 LMKNM 572



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
 Frame = -2

Query: 410 MPCQNASSWNTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALRLF 231
           MP  ++ S+N MI+GY ++GE   AR LF+EMP+RD +SW+ +I GY ++ +  +A  LF
Sbjct: 90  MPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF 149

Query: 230 -IELKRDGERMNRSTFTSALSTCADMAALEFGKQVHGRLVKAGYEMGDYVGNALVLMYGK 54
            I  +RD    N      A + C D A   F +           E  D   NAL+  Y +
Sbjct: 150 EIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP---------EKNDVSWNALLSAYVQ 200

Query: 53  CGSVEEAYDVFES 15
              +EEA  +F+S
Sbjct: 201 NSKMEEACMLFKS 213


>ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297318652|gb|EFH49074.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 776

 Score =  200 bits (509), Expect = 9e-50
 Identities = 92/138 (66%), Positives = 120/138 (86%)
 Frame = -2

Query: 416 EAMPCQNASSWNTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALR 237
           + MPC+N S+WNTMITGYAQ G+I+ A++LF++MPKRD +SW+A+IAGY+QSGHS EALR
Sbjct: 331 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALR 390

Query: 236 LFIELKRDGERMNRSTFTSALSTCADMAALEFGKQVHGRLVKAGYEMGDYVGNALVLMYG 57
           LF+ ++R+G R+NRS+F+SALSTCAD+ ALE GKQ+HGRLVK GYE G +VGNAL+LMY 
Sbjct: 391 LFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 450

Query: 56  KCGSVEEAYDVFESIQEK 3
           KCGS+EEA D+F+ +  K
Sbjct: 451 KCGSIEEANDLFKEMAGK 468



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
 Frame = -2

Query: 383 NTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALRLFIELKRDGER 204
           N ++  Y + G I  A DLF EM  +D +SW+ +IAGY++ G  EEALR F  +KR+G +
Sbjct: 443 NALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLK 502

Query: 203 MNRSTFTSALSTCADMAALEFGKQ-VHGRLVKAGYEMGDYVGNALVLMYGKCGSVEEAYD 27
            + +T  + LS C+    ++ G+Q  H      G          +V + G+ G +EEA++
Sbjct: 503 PDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHN 562

Query: 26  VFESI 12
           + +++
Sbjct: 563 LMKNM 567



 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 45/138 (32%), Positives = 77/138 (55%)
 Frame = -2

Query: 416 EAMPCQNASSWNTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALR 237
           ++M  ++  SWNT+ITGYAQ+GEI+ AR LF+E P  D  +W+A+++GY Q+   EEA  
Sbjct: 238 DSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARE 297

Query: 236 LFIELKRDGERMNRSTFTSALSTCADMAALEFGKQVHGRLVKAGYEMGDYVGNALVLMYG 57
           LF    R  ER N  ++ + L+       +E  K++   +            N ++  Y 
Sbjct: 298 LF---DRMPER-NEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVS----TWNTMITGYA 349

Query: 56  KCGSVEEAYDVFESIQEK 3
           +CG + EA ++F+ + ++
Sbjct: 350 QCGKISEAKNLFDKMPKR 367



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 42/134 (31%), Positives = 73/134 (54%), Gaps = 1/134 (0%)
 Frame = -2

Query: 416 EAMPCQNASSWNTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALR 237
           E MP ++  SWNT+++GYAQ+G ++ AR +F+ MP+++ +SW+A+++ Y Q+   EEA  
Sbjct: 145 ERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACV 204

Query: 236 LFIELKRDGERMNRSTFTSALSTCADMAALEFGKQVHGRLVKAGYEMGDYVG-NALVLMY 60
           LF      G R N   +      C     ++  K V  R      ++ D V  N ++  Y
Sbjct: 205 LF------GSREN---WALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGY 255

Query: 59  GKCGSVEEAYDVFE 18
            + G ++EA  +F+
Sbjct: 256 AQNGEIDEARQLFD 269



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 46/132 (34%), Positives = 75/132 (56%)
 Frame = -2

Query: 410 MPCQNASSWNTMITGYAQSGEINCARDLFNEMPKRDSISWSAIIAGYAQSGHSEEALRLF 231
           MP  ++ S+N MI+GY ++GE   AR LF+EMP+RD +SW+ +I GY ++ +  +A  LF
Sbjct: 85  MPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF 144

Query: 230 IELKRDGERMNRSTFTSALSTCADMAALEFGKQVHGRLVKAGYEMGDYVGNALVLMYGKC 51
              +R  ER +  ++ + LS  A    ++  ++V  R+     E  D   NAL+  Y + 
Sbjct: 145 ---ERMPER-DVCSWNTILSGYAQNGCVDDARRVFDRMP----EKNDVSWNALLSAYVQN 196

Query: 50  GSVEEAYDVFES 15
             +EEA  +F S
Sbjct: 197 SKLEEACVLFGS 208