BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029512
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|2...   108   2e-21
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...   105   1e-20
ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus ...   105   2e-20
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...   100   5e-19
ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine...    99   1e-18

>ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|222845402|gb|EEE82949.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score =  108 bits (269), Expect = 2e-21
 Identities = 95/304 (31%), Positives = 141/304 (46%), Gaps = 23/304 (7%)
 Frame = +2

Query: 62  EIMLEIFSRLPIQALSQCKLVCKPWYAYWRSFVTNPHFINLHHSRINQHDPSYLILLDRS 241
           EI ++I SRLP++A++QCK VCK     WR  ++ P+F  LH ++     PS L+    S
Sbjct: 27  EIFVDILSRLPVEAMTQCKSVCKS----WRDLLSTPYFARLHFAKAK---PSSLLFCHCS 79

Query: 242 SN---LYIVDHQSHTSSFKAVETKVNSLPDRIKL---------VGSSNGLLCICSFPSY- 382
            N   LY      H+S    +   + S+P + KL         VGSSNGLLC+       
Sbjct: 80  GNKTKLYCC--HIHSSRGSNINNAMVSMPTKFKLPKNTFRGKVVGSSNGLLCLSEIHRMK 137

Query: 383 GNFYICNPISQTEV-LEIPKAD----VVDVISGSFASGFVFDKTMGNYKIVNTWMTFRAD 547
             FYICNPI+   + +  PK D    V + I      GF ++      KI+   +     
Sbjct: 138 KKFYICNPITGEYIGIAGPKVDQGWHVFEPI------GFFYNPQNQQCKILMPRVRVGYG 191

Query: 548 EFVRARVEVYSLGSGRWRRIESIPSCFMLNPPLLFLNGALHWEVTHRENFETYEEGNKPP 727
            F  +  ++++LGS  WR I+ IP    L   +  LNG+LHW  T  +            
Sbjct: 192 NFPGSG-QIFTLGSNSWRNID-IPGHLHLIRAVP-LNGSLHWISTRDDR----------- 237

Query: 728 SSLVSSIAAFDIGSEKLRAFKKPPG---QSGPFRLLGEFLCTTDEKSNHMDVWVMKDYGV 898
                 I++FD+ +E+  +   P      +     LG FLC  D +    ++WVMK+YGV
Sbjct: 238 -----HISSFDMENEQALSIALPDQVVMHTASLAGLGNFLCIFDNEYPEFNIWVMKEYGV 292

Query: 899 --SW 904
             SW
Sbjct: 293 EESW 296


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  105 bits (262), Expect = 1e-20
 Identities = 97/317 (30%), Positives = 150/317 (47%), Gaps = 31/317 (9%)
 Frame = +2

Query: 47  IQLYREIMLEIFSRLPIQALSQCKLVCKPWYAYWRSFVTNPHFINLHHSRINQHDPSYLI 226
           + L+ EI  +I SRLP+++L + + V K W       + +P+FIN H  R +Q      +
Sbjct: 1   MMLFPEITADILSRLPVKSLKRFRCVSKSWC----KEIDSPYFINTHLKRSSQAHTHLNL 56

Query: 227 LLDRSSNLYIVDHQSHTSSFKAVETKVNSLPD---RIKLVGSSNGLLCICSFPSYGNFYI 397
           +L  ++NL  VD  S    F ++E K N L       +++GS NGLL + +  S  +  +
Sbjct: 57  ILRDATNLCTVDLDS--PDFTSIELKNNPLKSDDCATEVMGSCNGLLALLN--SDFSIAL 112

Query: 398 CNPISQ------TEVLEIPKADVVDVISGSF-ASGFVFDKTMGNYKIVNTWMTFRADE-- 550
            NP ++         LE+P       +S  F   GF  D    +YK+V  ++ F  D   
Sbjct: 113 YNPSTREKKMIPVSPLELPNDLDDSKVSSLFNFYGFGHDPINEDYKVVR-FIHFYGDSPD 171

Query: 551 -FVRARVEVYSLGSGRWRRIESIP--SCFMLNPPL---------LFLNGALHWEVTHREN 694
            F    V+VYSL S  W+RI+  P    F+L P           +F N A+HW+ T    
Sbjct: 172 GFFHCEVKVYSLKSNSWKRIDDYPYDLRFILPPDYHPRCRRGYGVFANSAVHWKAT---- 227

Query: 695 FETYEEGNKPPSSLVSSIAAFDIGSEKLRAFKKPPGQSGPFRL----LGEFLCTTDEKS- 859
                +G +  S L   I AFD+G+E+ +   +P   S    +    LG  LC    K+ 
Sbjct: 228 --VVGKGKENGSDL---IVAFDLGAEEFKIIPQPDYSSNEHEMNVGVLGGCLCVFCNKNC 282

Query: 860 NHMDVWVMKDYGV--SW 904
             +++WVMK+YGV  SW
Sbjct: 283 KQVEIWVMKEYGVKESW 299


>ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223543895|gb|EEF45421.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 358

 Score =  105 bits (261), Expect = 2e-20
 Identities = 88/304 (28%), Positives = 141/304 (46%), Gaps = 20/304 (6%)
 Frame = +2

Query: 53  LYREIMLEIFSRLPIQALSQCKLVCKPWYAYWRSFVTNPHFINLHHSR------INQHDP 214
           L ++++L I  RLP+++L + K+VCK W+      +++PHFI++H S       IN H  
Sbjct: 4   LVQDVVLHILLRLPVKSLCRFKVVCKSWWL----LISDPHFISMHLSLATKNNCINCHRW 59

Query: 215 SYLILLDRSSNLYIVDHQSHTSSFKAVETKV-----NSLPDRIKLVGSSNGLLCICSFPS 379
              +      ++Y V +++   S +A+  K+     +   D +K +GS NGLLC+ S P 
Sbjct: 60  RLCLTSFSLPSVYSVGYEA---SDRAIAIKLGYPLKSDCYDEVKFIGSCNGLLCVASEP- 115

Query: 380 YGNFYICNPISQTEVLEIPKADVVDVISGS---FASGFVFDKTMGNYKIVNTWMTFRADE 550
            G   + NP S     EIP+       + S   +  GF +  ++ +YK+V          
Sbjct: 116 -GVLLLLNP-STRAAQEIPRLGNRRPFTQSSLPYMYGFGYAHSINDYKLVKI-------- 165

Query: 551 FVRARVEVYSLGSGRWRRIESIPSCFMLNPPLLFLNGALHWEVTHRENFETYEEGNKPPS 730
             R  V VYS+    WR +   P   +   P + LNGA+HW V+  ++           S
Sbjct: 166 SCRGCVFVYSVKENSWRSVGGFPYSILALDPGIQLNGAIHWVVSRSKD-----------S 214

Query: 731 SLVSSIAAFDIGSEKLRAFKKPPGQSGPFRL--LGEFLCTT--DEKSNHMDVWVMKDYGV 898
           +    I AFD+  EK      P      + +   GE LC     + ++H D WVMK YG+
Sbjct: 215 TKSQIIGAFDLVEEKFWDVPPPVSVHNFYGIGVFGECLCILPGSDVTSHNDFWVMKRYGI 274

Query: 899 --SW 904
             SW
Sbjct: 275 RDSW 278


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score =  100 bits (249), Expect = 5e-19
 Identities = 84/294 (28%), Positives = 140/294 (47%), Gaps = 16/294 (5%)
 Frame = +2

Query: 62  EIMLEIFSRLPIQALSQCKLVCKPWYAYWRSFVTNPHFINLHHSRINQHDPSYLILLDRS 241
           E+  EI SR+P + L + +  CK    +WR+ + +  FI LH S+        +I+L + 
Sbjct: 7   EVTTEILSRVPAKPLLRLRSTCK----WWRNLIDSTDFIFLHLSKSRDS----VIILRQH 58

Query: 242 SNLYIVDHQSHTSSFKAVETKVNSLPDRIKLVGSSNGLLCICSFPSYGNFYICNP----- 406
           S LY +D  S     K ++  +    +RIK++GS NGLLCIC+      F+  NP     
Sbjct: 59  SRLYELDLNS-MDRVKELDHPLMCYSNRIKVLGSCNGLLCICNIADDIAFW--NPTIRKH 115

Query: 407 -ISQTEVL---EIPKADVVDVISGSFASGFVFDKTMGNYKIVN-TWMTFRADEFVRARVE 571
            I  +E L   E  + + +  +  +   GF +D    +YK+V+ ++     +    + V+
Sbjct: 116 RIIPSEPLIRKETNENNTITTLLAAHVYGFGYDSATDDYKLVSISYFVDLHNRSFDSHVK 175

Query: 572 VYSLGSGRWRRIESIPSCFMLNPPL-LFLNGALHWEVTHRENFETYEEGNKPPSSLVSSI 748
           +Y++ +  W+ + S+P        + +F++GALHW VT     E+ +            I
Sbjct: 176 IYTMRTDVWKTLPSMPYALCCARTMGVFVSGALHWVVTRDLEPESRD-----------LI 224

Query: 749 AAFDIGSEKLRAFKKPPGQSGPF----RLLGEFLCTTDEK-SNHMDVWVMKDYG 895
            AFD+  E  R    P    G F     LL   LC  + + S+  DVWVM++YG
Sbjct: 225 VAFDLRFEVFREVALPGTVDGKFDMDVALLRGMLCIIENRGSDGFDVWVMREYG 278


>ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 385

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 83/287 (28%), Positives = 141/287 (49%), Gaps = 9/287 (3%)
 Frame = +2

Query: 62  EIMLEIFSRLPIQALSQCKLVCKPWYAYWRSFVTNPHFINLHHSRINQHDPSYLILLDRS 241
           E++ EI SRLP++++ + +  CK    +WRS + + HF+  H ++ +    S LIL  RS
Sbjct: 8   EVVTEILSRLPVKSVIRLRSTCK----WWRSIIDSRHFVLFHLNKSH----SSLILRHRS 59

Query: 242 SNLYIVDHQSHTSSFKAVETKVNSLPDRIKLVGSSNGLLCICSFPSYGNFYICNPISQTE 421
            +LY +D +S   +   +   +    + IK++GSSNGLLCI +     +  + NP  +  
Sbjct: 60  -HLYSLDLKSPEQNPVELSHPLMCYSNSIKVLGSSNGLLCISNVAD--DIALWNPFLRKH 116

Query: 422 VLEIPKADVVDVISGSFAS---GFVFDKTMGNYKIVN-TWMTFRADEFVRARVEVYSLGS 589
            + +P        S  FA+   GF       +YK+++ T+          ++V++Y+L S
Sbjct: 117 RI-LPADRFHRPQSSLFAARVYGFGHHSPSNDYKLLSITYFVDLQKRTFDSQVQLYTLKS 175

Query: 590 GRWRRIESIPSCFMLNPPL-LFLNGALHWEVTHRENFETYEEGNKPPSSLVSSIAAFDIG 766
             W+ + S+P        + +F++G+LHW VT +   + +E     P  +VS    FD+ 
Sbjct: 176 DSWKNLPSMPYALCCARTMGVFVSGSLHWLVTRK--LQPHE-----PDLIVS----FDLT 224

Query: 767 SEKLRAFKKPPGQSGPF----RLLGEFLCTTDEKSNHMDVWVMKDYG 895
            E       P   +G F     LLG  LC  + +    DVWVM+ YG
Sbjct: 225 RETFHEVPLPVTVNGDFDMQVALLGGCLCVVEHRGTGFDVWVMRVYG 271