BLASTX nr result

ID: Coptis23_contig00029495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029495
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275941.2| PREDICTED: uncharacterized protein LOC100252...    61   8e-08
emb|CBI34995.3| unnamed protein product [Vitis vinifera]               61   8e-08
ref|XP_003622403.1| AAA-ATPase 1-like protein [Medicago truncatu...    57   2e-06
ref|XP_002267418.2| PREDICTED: mitochondrial chaperone BCS1 isof...    57   2e-06
ref|XP_002275823.2| PREDICTED: ATP-dependent zinc metalloproteas...    56   3e-06

>ref|XP_002275941.2| PREDICTED: uncharacterized protein LOC100252565 [Vitis vinifera]
          Length = 520

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/50 (56%), Positives = 38/50 (76%)
 Frame = -2

Query: 200 LDTHHLFENIEQMFIDTQISPADVAENLMPKTTMGKFAELCLENLIQALK 51
           LD+HHLF +I ++  +T ++PADVAENLMPK+  G     CLE+LIQAL+
Sbjct: 408 LDSHHLFASIRRLLEETNMTPADVAENLMPKSVTGDPGTTCLESLIQALE 457


>emb|CBI34995.3| unnamed protein product [Vitis vinifera]
          Length = 850

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/50 (56%), Positives = 38/50 (76%)
 Frame = -2

Query: 200 LDTHHLFENIEQMFIDTQISPADVAENLMPKTTMGKFAELCLENLIQALK 51
           LD+HHLF +I ++  +T ++PADVAENLMPK+  G     CLE+LIQAL+
Sbjct: 323 LDSHHLFASIRRLLEETNMTPADVAENLMPKSVTGDPGTTCLESLIQALE 372


>ref|XP_003622403.1| AAA-ATPase 1-like protein [Medicago truncatula]
           gi|355497418|gb|AES78621.1| AAA-ATPase 1-like protein
           [Medicago truncatula]
          Length = 520

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/51 (54%), Positives = 39/51 (76%)
 Frame = -2

Query: 200 LDTHHLFENIEQMFIDTQISPADVAENLMPKTTMGKFAELCLENLIQALKD 48
           ++ H LFE+IE++  + +I+PADVAENLMPK+ M   A+ CL NLI+AL D
Sbjct: 423 VENHALFESIERLIGEVKITPADVAENLMPKSPMDD-ADKCLSNLIEALSD 472


>ref|XP_002267418.2| PREDICTED: mitochondrial chaperone BCS1 isoform 1 [Vitis vinifera]
          Length = 474

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/50 (52%), Positives = 42/50 (84%)
 Frame = -2

Query: 200 LDTHHLFENIEQMFIDTQISPADVAENLMPKTTMGKFAELCLENLIQALK 51
           LD+HHLF+ IE++  +++++PADVAE+LMPKT++   AE  L++L+QAL+
Sbjct: 401 LDSHHLFDTIERLLGESRVTPADVAEHLMPKTSVAD-AETSLKSLVQALE 449


>ref|XP_002275823.2| PREDICTED: ATP-dependent zinc metalloprotease FtsH-like [Vitis
           vinifera]
          Length = 528

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = -2

Query: 200 LDTHHLFENIEQMFIDTQISPADVAENLMPKT-TMGKFAELCLENLIQALK 51
           LD+HHLF +I ++  +T ++PADVAENLMPK+ +       CLENLIQAL+
Sbjct: 412 LDSHHLFASIRRLLEETNMTPADVAENLMPKSISTDDPGTACLENLIQALE 462


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