BLASTX nr result

ID: Coptis23_contig00029493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029493
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170765.1| PREDICTED: LOW QUALITY PROTEIN: LRR receptor...   161   4e-38
ref|XP_004143765.1| PREDICTED: LRR receptor-like serine/threonin...   161   4e-38
ref|XP_002276030.1| PREDICTED: LRR receptor-like serine/threonin...   159   2e-37
ref|XP_003548492.1| PREDICTED: LRR receptor-like serine/threonin...   152   3e-35
ref|XP_003624516.1| Receptor-like-kinase [Medicago truncatula] g...   141   6e-32

>ref|XP_004170765.1| PREDICTED: LOW QUALITY PROTEIN: LRR receptor-like
           serine/threonine-protein kinase RPK2-like [Cucumis
           sativus]
          Length = 1041

 Score =  161 bits (408), Expect = 4e-38
 Identities = 78/130 (60%), Positives = 92/130 (70%)
 Frame = +3

Query: 3   RIPPEIGKLSQLENLDVSRNSLTDKIPKELGNCSKLFSLVLTNLVDSQSRRDSIRGEFNA 182
           +IP EIG++S+L  LDVSRNSLTD IPKELGNC KL  +VLTNL D     DS+RGEFNA
Sbjct: 238 KIPAEIGQISELRILDVSRNSLTDSIPKELGNCRKLSQIVLTNLNDINPDNDSLRGEFNA 297

Query: 183 FDGGIPPXXXXXXXXXXXWAPRANLGGRLPSNWSASCKLHVVNLGQNYFTGLIPRGMGLC 362
           F+GGIP            WAPR N  GRLP+NW++ C L V+NLGQNY TG IP  +  C
Sbjct: 298 FNGGIPSGLLLLPSLQVLWAPRGNFNGRLPTNWNSLCSLKVLNLGQNYITGTIPESIRKC 357

Query: 363 RNLSFLDLSS 392
            NL++LDLSS
Sbjct: 358 ANLTYLDLSS 367


>ref|XP_004143765.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           RPK2-like [Cucumis sativus]
          Length = 1041

 Score =  161 bits (408), Expect = 4e-38
 Identities = 78/130 (60%), Positives = 92/130 (70%)
 Frame = +3

Query: 3   RIPPEIGKLSQLENLDVSRNSLTDKIPKELGNCSKLFSLVLTNLVDSQSRRDSIRGEFNA 182
           +IP EIG++S+L  LDVSRNSLTD IPKELGNC KL  +VLTNL D     DS+RGEFNA
Sbjct: 238 KIPAEIGQISELRILDVSRNSLTDSIPKELGNCRKLSQIVLTNLNDINPDNDSLRGEFNA 297

Query: 183 FDGGIPPXXXXXXXXXXXWAPRANLGGRLPSNWSASCKLHVVNLGQNYFTGLIPRGMGLC 362
           F+GGIP            WAPR N  GRLP+NW++ C L V+NLGQNY TG IP  +  C
Sbjct: 298 FNGGIPSGLLLLPSLQVLWAPRGNFNGRLPTNWNSLCSLKVLNLGQNYITGTIPESIRKC 357

Query: 363 RNLSFLDLSS 392
            NL++LDLSS
Sbjct: 358 ANLTYLDLSS 367


>ref|XP_002276030.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2
           [Vitis vinifera] gi|147802220|emb|CAN68268.1|
           hypothetical protein VITISV_029909 [Vitis vinifera]
          Length = 1066

 Score =  159 bits (403), Expect = 2e-37
 Identities = 81/134 (60%), Positives = 93/134 (69%), Gaps = 4/134 (2%)
 Frame = +3

Query: 3   RIPPEIGKLSQLENLDVSRNSLTDKIPKELGNCSKLFSLVLTNLVDSQSRRDSIR----G 170
           RIP EIG++SQL  LDVSRNSLTD IPKEL NC +L  +VLTNL D  S  D++     G
Sbjct: 244 RIPAEIGRISQLRVLDVSRNSLTDGIPKELANCRELSVIVLTNLDDFSSAEDNLADSSSG 303

Query: 171 EFNAFDGGIPPXXXXXXXXXXXWAPRANLGGRLPSNWSASCKLHVVNLGQNYFTGLIPRG 350
           EFNAF GG+P            WAPRANLGGRLPSNWS SC L  +NLGQNY +  +P  
Sbjct: 304 EFNAFMGGVPYELLLLPKLQIFWAPRANLGGRLPSNWSDSCSLRALNLGQNYISAAVPES 363

Query: 351 MGLCRNLSFLDLSS 392
           MG C+NL+FLDLSS
Sbjct: 364 MGKCKNLTFLDLSS 377


>ref|XP_003548492.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           RPK2-like, partial [Glycine max]
          Length = 1022

 Score =  152 bits (384), Expect = 3e-35
 Identities = 77/133 (57%), Positives = 89/133 (66%), Gaps = 3/133 (2%)
 Frame = +3

Query: 3   RIPPEIGKLSQLENLDVSRNSLTDKIPKELGNCSKLFSLVLTNLVDSQSR---RDSIRGE 173
           RIP EIG + +L  LDVSRNSLT ++PKEL NC KL  LVLT+L + +      D  RGE
Sbjct: 209 RIPSEIGHIVELRVLDVSRNSLTGRVPKELANCVKLSVLVLTDLFEDRDEGGLEDGFRGE 268

Query: 174 FNAFDGGIPPXXXXXXXXXXXWAPRANLGGRLPSNWSASCKLHVVNLGQNYFTGLIPRGM 353
           FNAF G IP            WAPRANLGGRLPS WS  C L V+NL QNY  G++P  +
Sbjct: 269 FNAFVGNIPHQVLLLSSLRVLWAPRANLGGRLPSGWSDLCSLRVLNLAQNYVAGVVPESL 328

Query: 354 GLCRNLSFLDLSS 392
           G+CRNLSFLDLSS
Sbjct: 329 GMCRNLSFLDLSS 341


>ref|XP_003624516.1| Receptor-like-kinase [Medicago truncatula]
           gi|355499531|gb|AES80734.1| Receptor-like-kinase
           [Medicago truncatula]
          Length = 1131

 Score =  141 bits (355), Expect = 6e-32
 Identities = 79/138 (57%), Positives = 89/138 (64%), Gaps = 9/138 (6%)
 Frame = +3

Query: 6   IPPEIGKLSQLENLDVSRNSLTDKIPKELGNCSKLFSLVLTNLV-------DSQSRRDS- 161
           IP EIG   +L  LDVSRNSLT +IP ELGNC KL  LVLT+L        D     DS 
Sbjct: 300 IPHEIGDAVELRVLDVSRNSLTGRIPNELGNCLKLSVLVLTDLYEDHGGSNDGSLLEDSR 359

Query: 162 IRGEFNAFDGGIPPXXXXXXXXXXXWAPRANLGGRLPS-NWSASCKLHVVNLGQNYFTGL 338
            RGEFNAF G IP            WAPRANLGGRLP+  WS SC L V+NL QNY TG+
Sbjct: 360 FRGEFNAFVGNIPYKVLLLSGLRVLWAPRANLGGRLPAAGWSDSCSLKVLNLAQNYVTGV 419

Query: 339 IPRGMGLCRNLSFLDLSS 392
           +P  +G+CRNL+FLDLSS
Sbjct: 420 VPESLGMCRNLTFLDLSS 437


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