BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029479
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322045.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-13
ref|XP_002524613.1| step II splicing factor slu7, putative [Rici...    65   6e-13
ref|XP_002318579.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-13
emb|CAB16783.1| putative protein [Arabidopsis thaliana] gi|72706...    67   1e-12
ref|XP_002866976.1| hypothetical protein ARALYDRAFT_490928 [Arab...    68   1e-12

>ref|XP_002322045.1| predicted protein [Populus trichocarpa] gi|222869041|gb|EEF06172.1|
           predicted protein [Populus trichocarpa]
          Length = 536

 Score = 66.2 bits (160), Expect(2) = 3e-13
 Identities = 32/51 (62%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
 Frame = -1

Query: 311 GQAMEFK-FSIHACEEYEKGENGHIQAAPVQAELFYKN*KIIKEKLKSKTR 162
           GQA+EFK  +IHA E ++KG++ H+QAAP QAEL YKN K+IKEKLK++T+
Sbjct: 290 GQALEFKHLNIHAWEAFDKGQDIHMQAAPSQAELLYKNHKVIKEKLKTRTK 340



 Score = 33.5 bits (75), Expect(2) = 3e-13
 Identities = 18/34 (52%), Positives = 20/34 (58%)
 Frame = -2

Query: 157 KKYRMQLFEVEHCNSLLLGLGKRQVEYDHTGRII 56
           +KY     E E    LLLG  +RQVEYD  GRII
Sbjct: 345 EKYGNAASEEEIPRELLLGQSERQVEYDRAGRII 378


>ref|XP_002524613.1| step II splicing factor slu7, putative [Ricinus communis]
           gi|223536166|gb|EEF37821.1| step II splicing factor
           slu7, putative [Ricinus communis]
          Length = 536

 Score = 65.1 bits (157), Expect(2) = 6e-13
 Identities = 31/51 (60%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
 Frame = -1

Query: 311 GQAMEFK-FSIHACEEYEKGENGHIQAAPVQAELFYKN*KIIKEKLKSKTR 162
           GQA+EFK  +IH+ E ++KG++ H+QAAP QAEL YKN K+IKEKLK++T+
Sbjct: 290 GQALEFKQLNIHSWEAFDKGQDIHMQAAPSQAELLYKNYKVIKEKLKTRTK 340



 Score = 33.5 bits (75), Expect(2) = 6e-13
 Identities = 18/34 (52%), Positives = 20/34 (58%)
 Frame = -2

Query: 157 KKYRMQLFEVEHCNSLLLGLGKRQVEYDHTGRII 56
           +KY     E E    LLLG  +RQVEYD  GRII
Sbjct: 345 EKYGNAASEEEIPRELLLGQSERQVEYDRAGRII 378


>ref|XP_002318579.1| predicted protein [Populus trichocarpa] gi|222859252|gb|EEE96799.1|
           predicted protein [Populus trichocarpa]
          Length = 536

 Score = 65.1 bits (157), Expect(2) = 6e-13
 Identities = 31/51 (60%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
 Frame = -1

Query: 311 GQAMEFK-FSIHACEEYEKGENGHIQAAPVQAELFYKN*KIIKEKLKSKTR 162
           GQA+EFK  +IHA E ++KG++ H+QAAP QAEL YKN K+IK+KLK++T+
Sbjct: 290 GQALEFKHLNIHAWEAFDKGQDIHMQAAPSQAELLYKNHKVIKDKLKTRTK 340



 Score = 33.5 bits (75), Expect(2) = 6e-13
 Identities = 18/34 (52%), Positives = 20/34 (58%)
 Frame = -2

Query: 157 KKYRMQLFEVEHCNSLLLGLGKRQVEYDHTGRII 56
           +KY     E E    LLLG  +RQVEYD  GRII
Sbjct: 345 EKYGNAASEEEIPRELLLGQSERQVEYDRAGRII 378


>emb|CAB16783.1| putative protein [Arabidopsis thaliana] gi|7270661|emb|CAB80378.1|
           step II splicing factor-like protein [Arabidopsis
           thaliana]
          Length = 538

 Score = 66.6 bits (161), Expect(2) = 1e-12
 Identities = 31/51 (60%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
 Frame = -1

Query: 311 GQAMEFK-FSIHACEEYEKGENGHIQAAPVQAELFYKN*KIIKEKLKSKTR 162
           GQA+EFK  +IH+CE ++KG + H+QAAP QAEL YKN K+ KEKLK++T+
Sbjct: 292 GQALEFKQINIHSCEAFDKGHDMHMQAAPSQAELLYKNFKVAKEKLKTQTK 342



 Score = 30.8 bits (68), Expect(2) = 1e-12
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = -2

Query: 157 KKYRMQLFEVEHCNSLLLGLGKRQVEYDHTGRII 56
           +KY     E E    LLLG  +RQ+EYD  GRI+
Sbjct: 347 EKYGNAATEGEIPMELLLGQSERQIEYDRAGRIM 380


>ref|XP_002866976.1| hypothetical protein ARALYDRAFT_490928 [Arabidopsis lyrata subsp.
           lyrata] gi|297312812|gb|EFH43235.1| hypothetical protein
           ARALYDRAFT_490928 [Arabidopsis lyrata subsp. lyrata]
          Length = 536

 Score = 68.2 bits (165), Expect(2) = 1e-12
 Identities = 31/51 (60%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
 Frame = -1

Query: 311 GQAMEFK-FSIHACEEYEKGENGHIQAAPVQAELFYKN*KIIKEKLKSKTR 162
           GQA+EFK  ++H+CE ++KG++ H+QAAP QAEL YKN K+ KEKLKS+T+
Sbjct: 290 GQALEFKQLNVHSCEAFDKGQDMHMQAAPSQAELLYKNFKVAKEKLKSQTK 340



 Score = 29.3 bits (64), Expect(2) = 1e-12
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = -2

Query: 112 LLLGLGKRQVEYDHTGRI 59
           LLLG  +RQVEYD  GRI
Sbjct: 360 LLLGQSERQVEYDRAGRI 377