BLASTX nr result
ID: Coptis23_contig00029478
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00029478 (417 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002314666.1| predicted protein [Populus trichocarpa] gi|2... 80 2e-13 emb|CAN66770.1| hypothetical protein VITISV_013810 [Vitis vinifera] 78 8e-13 emb|CBI26300.3| unnamed protein product [Vitis vinifera] 75 4e-12 ref|XP_002265460.1| PREDICTED: protein IQ-DOMAIN 14-like [Vitis ... 75 4e-12 ref|XP_003638200.1| Vacuolar protein sorting-associated protein-... 75 7e-12 >ref|XP_002314666.1| predicted protein [Populus trichocarpa] gi|222863706|gb|EEF00837.1| predicted protein [Populus trichocarpa] Length = 430 Score = 79.7 bits (195), Expect = 2e-13 Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 5/89 (5%) Frame = -3 Query: 253 MGKAGKWIKNFLTGKKEKGKGGSVRNQHCSYSAEFPTVPVA--PTTPKENRRWSFRRS-- 86 MGK GKW+++FLTGKK+K K NQ+ + S E P P++ PTT KE RRWSFRRS Sbjct: 1 MGKPGKWLRSFLTGKKDKEKEKGTSNQNSTPSIENPVTPISIPPTTAKEKRRWSFRRSSA 60 Query: 85 -ATASRDFSSMDLIATTLQSAVQSMLETE 2 A A +D + + ATT +AVQ ++E Sbjct: 61 TAAAPKDSNYTEPTATTQPAAVQDTFDSE 89 >emb|CAN66770.1| hypothetical protein VITISV_013810 [Vitis vinifera] Length = 570 Score = 77.8 bits (190), Expect = 8e-13 Identities = 46/90 (51%), Positives = 59/90 (65%), Gaps = 6/90 (6%) Frame = -3 Query: 253 MGKAGKWIKNFLTGKKEKGKGGSVRNQHC-SYSAEFPTVP--VAPTTPKENRRWSFRRSA 83 MGK GKWI+NFLTGKK+K + + S + E P+ P + PTTPKE RRWSFRRS+ Sbjct: 1 MGKTGKWIRNFLTGKKDKERDREKDKEKLNSIAIENPSTPILIPPTTPKEKRRWSFRRSS 60 Query: 82 TAS---RDFSSMDLIATTLQSAVQSMLETE 2 S +D SMD IATT A Q++L++E Sbjct: 61 ATSAGHKDSISMDTIATT-PPAGQTILDSE 89 >emb|CBI26300.3| unnamed protein product [Vitis vinifera] Length = 430 Score = 75.5 bits (184), Expect = 4e-12 Identities = 45/90 (50%), Positives = 58/90 (64%), Gaps = 6/90 (6%) Frame = -3 Query: 253 MGKAGKWIKNFLTGKKEKGKGGSVRNQHC-SYSAEFPTVP--VAPTTPKENRRWSFRRSA 83 MGK GKWI+NFLTGKK+K + + S + E P+ P + PTTPKE RRWSFRRS+ Sbjct: 1 MGKTGKWIRNFLTGKKDKERDREKDKEKLNSIAIENPSTPILIPPTTPKEKRRWSFRRSS 60 Query: 82 TAS---RDFSSMDLIATTLQSAVQSMLETE 2 S +D S+D IATT A Q +L++E Sbjct: 61 ATSAGHKDSISVDTIATT-PPAGQPILDSE 89 >ref|XP_002265460.1| PREDICTED: protein IQ-DOMAIN 14-like [Vitis vinifera] Length = 464 Score = 75.5 bits (184), Expect = 4e-12 Identities = 45/90 (50%), Positives = 58/90 (64%), Gaps = 6/90 (6%) Frame = -3 Query: 253 MGKAGKWIKNFLTGKKEKGKGGSVRNQHC-SYSAEFPTVP--VAPTTPKENRRWSFRRSA 83 MGK GKWI+NFLTGKK+K + + S + E P+ P + PTTPKE RRWSFRRS+ Sbjct: 1 MGKTGKWIRNFLTGKKDKERDREKDKEKLNSIAIENPSTPILIPPTTPKEKRRWSFRRSS 60 Query: 82 TAS---RDFSSMDLIATTLQSAVQSMLETE 2 S +D S+D IATT A Q +L++E Sbjct: 61 ATSAGHKDSISVDTIATT-PPAGQPILDSE 89 >ref|XP_003638200.1| Vacuolar protein sorting-associated protein-like protein [Medicago truncatula] gi|355504135|gb|AES85338.1| Vacuolar protein sorting-associated protein-like protein [Medicago truncatula] Length = 539 Score = 74.7 bits (182), Expect = 7e-12 Identities = 43/85 (50%), Positives = 56/85 (65%), Gaps = 8/85 (9%) Frame = -3 Query: 253 MGKAGKWIKNFLTGKK--EKGKGGSVRNQHCSYSAEFPTVPVAPTTPKENRRWSFRRSA- 83 MGK GKW+KNFLTGKK EK K NQ+ S E PT PV+ T KE +RWSFRRS+ Sbjct: 1 MGKKGKWLKNFLTGKKDKEKEKEKCNTNQNFSNGTENPTTPVSTTPSKEKKRWSFRRSSA 60 Query: 82 ----TASRDFSSMDLIAT-TLQSAV 23 TAS++ ++ ++ A+ T+QS V Sbjct: 61 TATPTASKELNNSEITASMTVQSTV 85