BLASTX nr result

ID: Coptis23_contig00029475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029475
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531277.1| ankyrin repeat-containing protein, putative ...    79   5e-13
ref|XP_002263664.1| PREDICTED: ankyrin-1 [Vitis vinifera] gi|296...    77   2e-12
emb|CAN69337.1| hypothetical protein VITISV_032631 [Vitis vinifera]    77   2e-12
ref|XP_002328336.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
dbj|BAC23047.1| ankyrin-like protein [Solanum tuberosum]               76   3e-12

>ref|XP_002531277.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223529110|gb|EEF31090.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 463

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 35/65 (53%), Positives = 51/65 (78%)
 Frame = -2

Query: 199 GKGVSETIANVKDSRGRGALHGAAQKGKLNICKYLLEELKFDVNWKDIEGNTALHYASGN 20
           GKG+++T+A++KD+  RGALH AA++GK  +CKYLLE+LK DV+ KD +G T L +A+  
Sbjct: 40  GKGMAKTVADIKDANKRGALHFAAREGKTEVCKYLLEDLKLDVDTKDDDGETPLIHAARQ 99

Query: 19  GHLST 5
           GH +T
Sbjct: 100 GHTAT 104


>ref|XP_002263664.1| PREDICTED: ankyrin-1 [Vitis vinifera] gi|296087918|emb|CBI35201.3|
           unnamed protein product [Vitis vinifera]
          Length = 458

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/73 (50%), Positives = 52/73 (71%)
 Frame = -2

Query: 223 ELTMNQEVGKGVSETIANVKDSRGRGALHGAAQKGKLNICKYLLEELKFDVNWKDIEGNT 44
           +L    + GKG++ T+A+VKD+  RGALH AA++G+  +CKYLLEELK DV+ KD +G T
Sbjct: 32  KLAAQLDDGKGLAGTVADVKDANKRGALHFAAREGRTEVCKYLLEELKLDVDAKDEDGET 91

Query: 43  ALHYASGNGHLST 5
            L +A+  GH  T
Sbjct: 92  PLLHAARQGHTVT 104


>emb|CAN69337.1| hypothetical protein VITISV_032631 [Vitis vinifera]
          Length = 433

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/75 (50%), Positives = 52/75 (69%)
 Frame = -2

Query: 229 SWELTMNQEVGKGVSETIANVKDSRGRGALHGAAQKGKLNICKYLLEELKFDVNWKDIEG 50
           S  L    + GKG++ T+A+VKD+  RGALH AA++G+  +CKYLLEELK DV+ KD +G
Sbjct: 30  SSRLAAQLDDGKGLAGTVADVKDANKRGALHFAAREGRTEVCKYLLEELKLDVDAKDEDG 89

Query: 49  NTALHYASGNGHLST 5
            T L +A+  GH  T
Sbjct: 90  ETPLLHAARQGHTVT 104


>ref|XP_002328336.1| predicted protein [Populus trichocarpa] gi|222838051|gb|EEE76416.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/65 (52%), Positives = 49/65 (75%)
 Frame = -2

Query: 199 GKGVSETIANVKDSRGRGALHGAAQKGKLNICKYLLEELKFDVNWKDIEGNTALHYASGN 20
           GKG+S+T+A +KD+  RGALH AA++ +  +CKYL+EELK DV+ KD +G T L +A+  
Sbjct: 40  GKGMSKTVAEIKDANKRGALHFAAREAQTEVCKYLIEELKLDVDTKDEDGETPLVHAARQ 99

Query: 19  GHLST 5
           GH +T
Sbjct: 100 GHTAT 104


>dbj|BAC23047.1| ankyrin-like protein [Solanum tuberosum]
          Length = 467

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/74 (51%), Positives = 52/74 (70%)
 Frame = -2

Query: 223 ELTMNQEVGKGVSETIANVKDSRGRGALHGAAQKGKLNICKYLLEELKFDVNWKDIEGNT 44
           +L    + GKG++ T+A+VKD   RGAL  AA++ K+ +CKYL+EELK DVN KD EG T
Sbjct: 32  KLAKQLDDGKGLAGTVADVKDGNKRGALIFAARESKIELCKYLVEELKVDVNEKDDEGET 91

Query: 43  ALHYASGNGHLSTV 2
            L +A+  GH +TV
Sbjct: 92  PLLHAAREGHTATV 105


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