BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029474
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    63   3e-08
ref|XP_002523031.1| nucleic acid binding protein, putative [Rici...    62   5e-08
ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    62   6e-08
dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ...    61   8e-08
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    60   1e-07

>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
 Frame = +1

Query: 1   VIRSETGEVVAAAHGKSSFCEIAMIELQGLQEGLKLAKRQNIKRVRAQTNSKNVISFLKG 180
           + R   G+ + A   K+   +I ++EL  +  GL LA    IK +  +++S +V+  +  
Sbjct: 181 LFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLASGLGIKAIWVESDSMSVVKTINR 240

Query: 181 THPWQVRY--IIKEVKHIIQELEKFEIVHVYRESNKLADALAANVPNVSFIELIPSSFSE 354
             P+  R    +  +  ++ + EK+ + H +RE+NK AD L+    + S + L  + F  
Sbjct: 241 KQPYSSRAGSCLNHIWVLLGKFEKYRVSHTWRETNKAADFLSRMDLSGSDVVLGTADFPN 300

Query: 355 DIRKIVYEDASGKQYMR 405
            +  I+ +DA G+ Y R
Sbjct: 301 GLNSIIKDDAEGRMYRR 317


>ref|XP_002523031.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223537714|gb|EEF39335.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 209

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
 Frame = +1

Query: 1   VIRSETGEVVAAAHGKSSFCEIAMIELQGLQEGLKLAKRQNIKRVRAQTNSKNVISFLKG 180
           VI  + G  +     K SFC +   EL GL +GL+LA +  I+R++ + ++K V+  + G
Sbjct: 70  VIHDDIGNWLRGFFMKMSFCIVTATELWGLYQGLELAWKIGIRRIQVEVDNKRVVKLIYG 129

Query: 181 --THPWQVRYIIKEVKHIIQELEKFEIVHVYRESNKLADALAANVPNVSFIELIPSSFSE 354
              H   +  +I  + H++    +  I HVY +S+K+A+ LA + P V   EL+ S    
Sbjct: 130 HRVHASCLILLIASIHHLLSRNWQVNIGHVYCKSSKVANCLAVSFPLVVH-ELVVSPLK- 187

Query: 355 DIRKIVYEDASGKQYMR 405
               ++ +DA G  Y R
Sbjct: 188 -THALLRQDALGICYPR 203


>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/137 (24%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
 Frame = +1

Query: 1   VIRSETGEVVAAAHGKSSFCEIAMIELQGLQEGLKLAKRQNIKRVRAQTNSKNVISFLKG 180
           ++R   G  + A   K+   +I ++EL  +  GL LA    IK +  +++S + +  +  
Sbjct: 300 LLRDNEGNAICAFVSKAPLDDIFLVELWAIWRGLVLALGLGIKVIWVESDSMSAVKTINR 359

Query: 181 --THPWQVRYIIKEVKHIIQELEKFEIVHVYRESNKLADALAANVPNVSFIELIPSSFSE 354
             +H  +    +  +  ++++ E++++ H +RE+NK AD L+  V   + + L P  F  
Sbjct: 360 VQSHSGKANRCLNHIWALLKKFEEYKVSHAWRETNKAADYLSKMVLERNDVVLWPVHFPT 419

Query: 355 DIRKIVYEDASGKQYMR 405
            ++ I+ +DA G+ Y R
Sbjct: 420 TLQNIIKDDAQGRIYCR 436


>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 676

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
 Frame = +1

Query: 1   VIRSETGEVVAAAHGKSSFCEIAMIELQGLQEGLKLAKRQNIKRVRAQTNSKNVISFLKG 180
           VIR E G  +         C   + EL G+  GL +A  +  +RVR + +S  V+ FL+ 
Sbjct: 536 VIRDEHGSWLVGFALNIGVCSAPLAELWGVYYGLVVAWERGWRRVRLEVDSALVVGFLQS 595

Query: 181 ----THPWQVRYIIKEVKHIIQELEKFEIVHVYRESNKLADALAANVPNVSFIELIPSSF 348
               +HP  + ++++     I +     I HVYRE+N+LAD LA     + F  L+  S 
Sbjct: 596 GIGDSHP--LAFLVRLCHGFISKDWIVRITHVYREANRLADGLANYAFTLPFGFLLLDSC 653

Query: 349 SEDIRKIVYEDASGKQYMR 405
            E +  I+ ED  G  + R
Sbjct: 654 PEHVSSILLEDVMGTSFPR 672


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/137 (24%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
 Frame = +1

Query: 1   VIRSETGEVVAAAHGKSSFCEIAMIELQGLQEGLKLAKRQNIKRVRAQTNSKNVISFLKG 180
           + R   G+ + A   K+   +I ++EL  +  GL LA    IK +  +++S + +  +  
Sbjct: 294 LFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLASGLGIKAIWVESDSMSAVKTINR 353

Query: 181 THPWQVRY--IIKEVKHIIQELEKFEIVHVYRESNKLADALAANVPNVSFIELIPSSFSE 354
             P+  R    +  +  ++++ EK+ + H +RE+NK AD L+    + + + L  + F  
Sbjct: 354 KQPYSSRAGSCLNHIWVLLEKFEKYLVSHTWRETNKAADFLSKMDLSGNDVVLGTADFPN 413

Query: 355 DIRKIVYEDASGKQYMR 405
            +  I+ +DA G+ Y R
Sbjct: 414 GLNSIIKDDAEGRMYRR 430