BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029464
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ32479.1| hypothetical protein [Nicotiana tabacum]               69   4e-13
ref|YP_398843.1| hypothetical protein NitoCp007 [Nicotiana tomen...    69   1e-12
ref|YP_004891584.1| unnamed protein product (chloroplast) [Nicot...    66   2e-12

>emb|CAJ32479.1| hypothetical protein [Nicotiana tabacum]
          Length = 90

 Score = 68.6 bits (166), Expect(2) = 4e-13
 Identities = 36/43 (83%), Positives = 38/43 (88%)
 Frame = +3

Query: 132 ERKYQVIR*NGKRGIRTLGTNNSYNGLAIRRFSPLSHLSQLNK 260
           ++K QVI  NGKRGIRTLGT NSYNGLAIRRFSPLSHLSQL K
Sbjct: 46  KKKNQVI--NGKRGIRTLGTINSYNGLAIRRFSPLSHLSQLKK 86



 Score = 30.8 bits (68), Expect(2) = 4e-13
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = +2

Query: 14  IKK*GIFRCLISEFSYDFIYYGYLTTIKIK 103
           IKK  +F CLI +FSYD +Y  +LT  K K
Sbjct: 13  IKK--VFPCLIFQFSYDLVYSTHLTKNKNK 40


>ref|YP_398843.1| hypothetical protein NitoCp007 [Nicotiana tomentosiformis]
           gi|80750905|dbj|BAE47981.1| hypothetical protein
           [Nicotiana tomentosiformis]
          Length = 90

 Score = 68.6 bits (166), Expect(2) = 1e-12
 Identities = 36/43 (83%), Positives = 38/43 (88%)
 Frame = +3

Query: 132 ERKYQVIR*NGKRGIRTLGTNNSYNGLAIRRFSPLSHLSQLNK 260
           ++K QVI  NGKRGIRTLGT NSYNGLAIRRFSPLSHLSQL K
Sbjct: 46  KKKNQVI--NGKRGIRTLGTINSYNGLAIRRFSPLSHLSQLKK 86



 Score = 28.9 bits (63), Expect(2) = 1e-12
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 32  FRCLISEFSYDFIYYGYLTTIKIK 103
           F CLI +FSYD +Y  +LT  K K
Sbjct: 17  FPCLIFKFSYDLVYSTHLTKNKNK 40


>ref|YP_004891584.1| unnamed protein product (chloroplast) [Nicotiana undulata]
           gi|347453885|gb|AEO95543.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347453996|gb|AEO95653.1| hypothetical protein
           [synthetic construct]
          Length = 90

 Score = 66.2 bits (160), Expect(2) = 2e-12
 Identities = 32/34 (94%), Positives = 32/34 (94%)
 Frame = +3

Query: 159 NGKRGIRTLGTNNSYNGLAIRRFSPLSHLSQLNK 260
           NGKRGIRTLGT NSYNGLAIRRFSPLSHLSQL K
Sbjct: 53  NGKRGIRTLGTINSYNGLAIRRFSPLSHLSQLKK 86



 Score = 30.8 bits (68), Expect(2) = 2e-12
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +2

Query: 17  KK*GIFRCLISEFSYDFIYYGYLTTIKIK 103
           K+  +F CLI +FSYD +Y  +LT  K K
Sbjct: 12  KRKRVFPCLIFQFSYDLVYSTHLTKNKNK 40