BLASTX nr result

ID: Coptis23_contig00029453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029453
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324339.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
ref|XP_002308712.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_003545404.1| PREDICTED: uncharacterized protein LOC100806...    86   3e-15
ref|XP_003549330.1| PREDICTED: uncharacterized protein LOC100794...    84   9e-15
ref|XP_003576536.1| PREDICTED: uncharacterized protein LOC100830...    81   1e-13

>ref|XP_002324339.1| predicted protein [Populus trichocarpa] gi|222865773|gb|EEF02904.1|
           predicted protein [Populus trichocarpa]
          Length = 519

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/77 (59%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
 Frame = -2

Query: 439 GGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNVLVPPDLLSQGSTL 260
           GGIVLHL +VTRTDFTNLWL ILIRN LRF+T+ LIFL+PKGDQ + L+PPD+L+  S  
Sbjct: 428 GGIVLHLFHVTRTDFTNLWLAILIRNFLRFATIGLIFLVPKGDQEDDLIPPDILTANSDA 487

Query: 259 NM-EEGLQLVSVNKKTQ 212
           ++ ++GL+L  V + ++
Sbjct: 488 SLDDDGLELAPVKETSE 504


>ref|XP_002308712.1| predicted protein [Populus trichocarpa] gi|222854688|gb|EEE92235.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/77 (58%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
 Frame = -2

Query: 439 GGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNVLVPPDLLSQGSTL 260
           GG++LHL +VTRTDFTNLWLVILIRN LRF+TL LIFL+P+GDQ++ L+P D+L+  S  
Sbjct: 394 GGVLLHLFHVTRTDFTNLWLVILIRNFLRFATLGLIFLVPRGDQADSLIPSDVLTANSAA 453

Query: 259 NM-EEGLQLVSVNKKTQ 212
           ++ ++GL+LV V + ++
Sbjct: 454 SLDDDGLELVPVKETSE 470


>ref|XP_003545404.1| PREDICTED: uncharacterized protein LOC100806186 [Glycine max]
          Length = 523

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/79 (50%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
 Frame = -2

Query: 439 GGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNVLVPPDLLSQGST- 263
           GG++L +L++TRTDFTNLWL +LIR++LRF+TL+L+FL+PK DQ   L+P ++  + ++ 
Sbjct: 445 GGVLLRVLHITRTDFTNLWLAVLIRDMLRFATLALVFLVPKTDQYEELLPFEVSGKNTSD 504

Query: 262 -LNMEEGLQLVSVNKKTQV 209
            ++ EE L+LV +N KT+V
Sbjct: 505 KVDEEETLELVPINGKTEV 523


>ref|XP_003549330.1| PREDICTED: uncharacterized protein LOC100794191 [Glycine max]
          Length = 511

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/79 (49%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
 Frame = -2

Query: 439 GGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNVLVPPDLLSQGST- 263
           GG++L +L++TRTDFTNLWL +LIR++LRF+TL+L+FL+PK DQ   L+P ++  + ++ 
Sbjct: 433 GGMLLRVLHITRTDFTNLWLAVLIRDMLRFATLALVFLVPKTDQYEELLPSEVSGKNTSE 492

Query: 262 -LNMEEGLQLVSVNKKTQV 209
            ++ EE L+LV ++ KT+V
Sbjct: 493 KVHEEETLELVPIHGKTEV 511


>ref|XP_003576536.1| PREDICTED: uncharacterized protein LOC100830453 [Brachypodium
           distachyon]
          Length = 501

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/59 (64%), Positives = 46/59 (77%)
 Frame = -2

Query: 439 GGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNVLVPPDLLSQGST 263
           G  VL  L+VTRTDF+NLWL +L+RNLLR S LS IFL+P  DQ++VL+P DLLS G T
Sbjct: 419 GAFVLRALHVTRTDFSNLWLAVLLRNLLRLSALSAIFLVPTADQTDVLLPHDLLSSGGT 477


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