BLASTX nr result
ID: Coptis23_contig00029453
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00029453 (440 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002324339.1| predicted protein [Populus trichocarpa] gi|2... 99 5e-19 ref|XP_002308712.1| predicted protein [Populus trichocarpa] gi|2... 97 1e-18 ref|XP_003545404.1| PREDICTED: uncharacterized protein LOC100806... 86 3e-15 ref|XP_003549330.1| PREDICTED: uncharacterized protein LOC100794... 84 9e-15 ref|XP_003576536.1| PREDICTED: uncharacterized protein LOC100830... 81 1e-13 >ref|XP_002324339.1| predicted protein [Populus trichocarpa] gi|222865773|gb|EEF02904.1| predicted protein [Populus trichocarpa] Length = 519 Score = 98.6 bits (244), Expect = 5e-19 Identities = 46/77 (59%), Positives = 62/77 (80%), Gaps = 1/77 (1%) Frame = -2 Query: 439 GGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNVLVPPDLLSQGSTL 260 GGIVLHL +VTRTDFTNLWL ILIRN LRF+T+ LIFL+PKGDQ + L+PPD+L+ S Sbjct: 428 GGIVLHLFHVTRTDFTNLWLAILIRNFLRFATIGLIFLVPKGDQEDDLIPPDILTANSDA 487 Query: 259 NM-EEGLQLVSVNKKTQ 212 ++ ++GL+L V + ++ Sbjct: 488 SLDDDGLELAPVKETSE 504 >ref|XP_002308712.1| predicted protein [Populus trichocarpa] gi|222854688|gb|EEE92235.1| predicted protein [Populus trichocarpa] Length = 479 Score = 97.4 bits (241), Expect = 1e-18 Identities = 45/77 (58%), Positives = 64/77 (83%), Gaps = 1/77 (1%) Frame = -2 Query: 439 GGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNVLVPPDLLSQGSTL 260 GG++LHL +VTRTDFTNLWLVILIRN LRF+TL LIFL+P+GDQ++ L+P D+L+ S Sbjct: 394 GGVLLHLFHVTRTDFTNLWLVILIRNFLRFATLGLIFLVPRGDQADSLIPSDVLTANSAA 453 Query: 259 NM-EEGLQLVSVNKKTQ 212 ++ ++GL+LV V + ++ Sbjct: 454 SLDDDGLELVPVKETSE 470 >ref|XP_003545404.1| PREDICTED: uncharacterized protein LOC100806186 [Glycine max] Length = 523 Score = 85.9 bits (211), Expect = 3e-15 Identities = 40/79 (50%), Positives = 63/79 (79%), Gaps = 2/79 (2%) Frame = -2 Query: 439 GGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNVLVPPDLLSQGST- 263 GG++L +L++TRTDFTNLWL +LIR++LRF+TL+L+FL+PK DQ L+P ++ + ++ Sbjct: 445 GGVLLRVLHITRTDFTNLWLAVLIRDMLRFATLALVFLVPKTDQYEELLPFEVSGKNTSD 504 Query: 262 -LNMEEGLQLVSVNKKTQV 209 ++ EE L+LV +N KT+V Sbjct: 505 KVDEEETLELVPINGKTEV 523 >ref|XP_003549330.1| PREDICTED: uncharacterized protein LOC100794191 [Glycine max] Length = 511 Score = 84.3 bits (207), Expect = 9e-15 Identities = 39/79 (49%), Positives = 63/79 (79%), Gaps = 2/79 (2%) Frame = -2 Query: 439 GGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNVLVPPDLLSQGST- 263 GG++L +L++TRTDFTNLWL +LIR++LRF+TL+L+FL+PK DQ L+P ++ + ++ Sbjct: 433 GGMLLRVLHITRTDFTNLWLAVLIRDMLRFATLALVFLVPKTDQYEELLPSEVSGKNTSE 492 Query: 262 -LNMEEGLQLVSVNKKTQV 209 ++ EE L+LV ++ KT+V Sbjct: 493 KVHEEETLELVPIHGKTEV 511 >ref|XP_003576536.1| PREDICTED: uncharacterized protein LOC100830453 [Brachypodium distachyon] Length = 501 Score = 80.9 bits (198), Expect = 1e-13 Identities = 38/59 (64%), Positives = 46/59 (77%) Frame = -2 Query: 439 GGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNVLVPPDLLSQGST 263 G VL L+VTRTDF+NLWL +L+RNLLR S LS IFL+P DQ++VL+P DLLS G T Sbjct: 419 GAFVLRALHVTRTDFSNLWLAVLLRNLLRLSALSAIFLVPTADQTDVLLPHDLLSSGGT 477