BLASTX nr result
ID: Coptis23_contig00029444
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00029444 (1140 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277197.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ... 86 1e-14 ref|XP_002302852.1| predicted protein [Populus trichocarpa] gi|2... 86 2e-14 ref|XP_003571262.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ... 85 4e-14 dbj|BAK07782.1| predicted protein [Hordeum vulgare subsp. vulgare] 85 4e-14 pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas gi|56... 84 5e-14 >ref|XP_002277197.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial [Vitis vinifera] gi|297739239|emb|CBI28890.3| unnamed protein product [Vitis vinifera] Length = 463 Score = 86.3 bits (212), Expect = 1e-14 Identities = 44/65 (67%), Positives = 49/65 (75%) Frame = +1 Query: 562 VETSTTMLEKFQGIAPLTLNLSSPDPIFRVTFMPLTTSTEMNIRAALSNSFGFGGTNASL 741 VE +L GIAPLTLNL+ PDP+F +MPLT S EM +RAALSNSFGFGGTNASL Sbjct: 398 VEAIFAVLAIHHGIAPLTLNLTRPDPVFSGGYMPLTASREMPVRAALSNSFGFGGTNASL 457 Query: 742 LFASA 756 LF SA Sbjct: 458 LFTSA 462 >ref|XP_002302852.1| predicted protein [Populus trichocarpa] gi|222844578|gb|EEE82125.1| predicted protein [Populus trichocarpa] Length = 415 Score = 85.9 bits (211), Expect = 2e-14 Identities = 43/64 (67%), Positives = 48/64 (75%) Frame = +1 Query: 562 VETSTTMLEKFQGIAPLTLNLSSPDPIFRVTFMPLTTSTEMNIRAALSNSFGFGGTNASL 741 VE +L GIAPLTLNL+ PDP+F+ FMPL S EM +RAALSNSFGFGGTNASL Sbjct: 351 VEAIFAILAVHHGIAPLTLNLNKPDPLFKDNFMPLIASKEMPVRAALSNSFGFGGTNASL 410 Query: 742 LFAS 753 LF S Sbjct: 411 LFTS 414 >ref|XP_003571262.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial-like [Brachypodium distachyon] Length = 460 Score = 84.7 bits (208), Expect = 4e-14 Identities = 42/66 (63%), Positives = 49/66 (74%) Frame = +1 Query: 562 VETSTTMLEKFQGIAPLTLNLSSPDPIFRVTFMPLTTSTEMNIRAALSNSFGFGGTNASL 741 VE T+L G+AP TLNL PDP+F FMPLT + +M IRAA+SNSFGFGGTNASL Sbjct: 395 VEAIFTVLAIHHGLAPPTLNLEKPDPLFEGAFMPLTAAKKMPIRAAISNSFGFGGTNASL 454 Query: 742 LFASAP 759 LF+S P Sbjct: 455 LFSSPP 460 >dbj|BAK07782.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 462 Score = 84.7 bits (208), Expect = 4e-14 Identities = 42/66 (63%), Positives = 48/66 (72%) Frame = +1 Query: 562 VETSTTMLEKFQGIAPLTLNLSSPDPIFRVTFMPLTTSTEMNIRAALSNSFGFGGTNASL 741 VE T+L G+AP TLNL PDP+F FMPLT S +M IRAA+SNSFGFGGTNASL Sbjct: 397 VEAIFTVLAIHHGVAPSTLNLEQPDPLFEGAFMPLTASKKMPIRAAISNSFGFGGTNASL 456 Query: 742 LFASAP 759 LF+ P Sbjct: 457 LFSCPP 462 >pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas gi|56966611|pdb|1W0I|B Chain B, Arabidopsis Thaliana Mitochondrial Kas gi|126030848|pdb|2IX4|A Chain A, Arabidopsis Thaliana Mitochondrial Beta-Ketoacyl Acp Synthase Hexanoic Acid Complex gi|126030849|pdb|2IX4|B Chain B, Arabidopsis Thaliana Mitochondrial Beta-Ketoacyl Acp Synthase Hexanoic Acid Complex Length = 431 Score = 84.3 bits (207), Expect = 5e-14 Identities = 41/64 (64%), Positives = 50/64 (78%) Frame = +1 Query: 562 VETSTTMLEKFQGIAPLTLNLSSPDPIFRVTFMPLTTSTEMNIRAALSNSFGFGGTNASL 741 VE ++L G+AP+TLN+ +PDPIF FMPLTTS +M +R A+SNSFGFGGTNASL Sbjct: 367 VEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASL 426 Query: 742 LFAS 753 LFAS Sbjct: 427 LFAS 430