BLASTX nr result

ID: Coptis23_contig00029438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029438
         (780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95158.1| unknown [Populus trichocarpa]                          120   3e-25
ref|XP_002528691.1| conserved hypothetical protein [Ricinus comm...   106   7e-21
emb|CBI18034.3| unnamed protein product [Vitis vinifera]              103   3e-20
ref|XP_002280623.1| PREDICTED: uncharacterized protein LOC100251...    98   2e-18
ref|XP_003533658.1| PREDICTED: uncharacterized protein LOC100814...    94   3e-17

>gb|ABK95158.1| unknown [Populus trichocarpa]
          Length = 350

 Score =  120 bits (301), Expect = 3e-25
 Identities = 89/250 (35%), Positives = 122/250 (48%), Gaps = 45/250 (18%)
 Frame = -1

Query: 615 SDASFLSKIRKMADVNPQVNETQ-QIIPSPAPIAEKELN--------------------- 502
           S+ SFLSKIR++  +    N  Q Q+ PSP+P     LN                     
Sbjct: 21  SNTSFLSKIRQLVALKDDSNSVQIQVPPSPSPDPANALNTTNTEENSVLKADSSTSINNS 80

Query: 501 --QNGINNNN------MKLP--------EESHGKDKNI-------KDGNEGEVTNEKCEE 391
              N  +NNN      + +P        E+++ + K +       K  +E EV  E C +
Sbjct: 81  SSSNKSDNNNTGIVGPISIPGNQTDSEAEKNNDEKKKVSEEKDHHKTDSESEVGGENCTK 140

Query: 390 ASSISSCKVEGKMTACVKRSETGSQDLMILIQNDGETVLNVSVIVPASVEDSTKPVEIPQ 211
              I  C     M+AC+   +  SQ  ++LIQN GE  L+V V  P SV++S   VE+ +
Sbjct: 141 VG-IKRCTDRKSMSACILGFDNESQRWIVLIQNSGERDLSVDVHAPNSVDNSL--VELGK 197

Query: 210 HQAKKINASTTVGKAQEITLNTNPGVCVLNTGVLVSEGNFFQRIPSYANLVTPTYGAYFI 31
           HQ KKI    TVG+  E+ LN   G CVL+   L S GNFF   PSY  L+TP  GAYF+
Sbjct: 198 HQTKKI--ILTVGENTEVILNAKNGECVLHLDPLESHGNFFLHFPSYDQLITPINGAYFL 255

Query: 30  ILVALVVGGT 1
           I+ A+V GGT
Sbjct: 256 IVTAVVFGGT 265


>ref|XP_002528691.1| conserved hypothetical protein [Ricinus communis]
           gi|223531863|gb|EEF33680.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 329

 Score =  106 bits (264), Expect = 7e-21
 Identities = 73/232 (31%), Positives = 111/232 (47%), Gaps = 25/232 (10%)
 Frame = -1

Query: 624 AQRSDASFLSKIRKMADVNPQVN-ETQQIIPSPAP--------------------IAEKE 508
           A  S AS LS  R+   V      ++ Q+ PSP+P                    +  KE
Sbjct: 19  ADVSSASVLSTFRRFLTVATTTPLDSNQVSPSPSPDPIQTRGSKTTSNETTTGSKVNSKE 78

Query: 507 LNQNGINNNNMKLPEESHGKDKNIKDGNEGEVTNEKCEEASSISS----CKVEGKMTACV 340
           LN N    +  + P     +  NIK  NE + T+ + E   + S     C+ +  + AC+
Sbjct: 79  LNSN---TDTTRPPPMLVNEGNNIK--NENKTTDSQLEIGQNCSGMLRFCRDDASLVACI 133

Query: 339 KRSETGSQDLMILIQNDGETVLNVSVIVPASVEDSTKPVEIPQHQAKKINASTTVGKAQE 160
             S+   +  +IL+QN+GE+ L V +  P    D +    + +HQ  KIN S  VG + +
Sbjct: 134 LNSDPEYKKFVILVQNEGESNLKVDISAPNP--DESTSFAMTKHQTSKINLS--VGDSNQ 189

Query: 159 ITLNTNPGVCVLNTGVLVSEGNFFQRIPSYANLVTPTYGAYFIILVALVVGG 4
           +      G CVL+T + VS+GN F  +PSY  L+TP  GAYF+I+  L+ GG
Sbjct: 190 VIFKAGNGECVLHTDIPVSQGNIFFNLPSYDRLITPINGAYFLIVTVLIFGG 241


>emb|CBI18034.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  103 bits (258), Expect = 3e-20
 Identities = 73/220 (33%), Positives = 114/220 (51%), Gaps = 17/220 (7%)
 Frame = -1

Query: 615 SDASFLSKIRKMADVNPQVNETQ-QIIPSPAPIA------EKELNQNGINNNNMK-LPEE 460
           S  S   K RK+AD  P+ + T  +I P P+P++       K ++   +     K  P  
Sbjct: 20  SGGSVAGKFRKLADAEPKEDSTATKIDPPPSPVSVGNQSEPKPIDPGKLGKEKSKDAPVP 79

Query: 459 SHGKDKNIKDGNEGEVTNEKCE-EASSISSCK--------VEGKMTACVKRSETGSQDLM 307
           +    K    G + E  ++K   E  +  +C          + KM AC++  E GS+ L 
Sbjct: 80  TTNSSKADSKGKQKEKNDDKASSELGTYGTCDGLLEKCTDPKKKMIACIQSFENGSKAL- 138

Query: 306 ILIQNDGETVLNVSVIVPASVEDSTKPVEIPQHQAKKINASTTVGKAQEITLNTNPGVCV 127
            ++QN+GE  L V++ V  SV+D+ + + IP+HQ + +N  +T   + ++ LN     CV
Sbjct: 139 -IVQNEGENTLKVNLTVSDSVKDALEVLVIPKHQTRSMNILST--GSSKLVLNAGNKDCV 195

Query: 126 LNTGVLVSEGNFFQRIPSYANLVTPTYGAYFIILVALVVG 7
                L+SEGNFFQ +P ++ LVTP YG YF+ L ALVVG
Sbjct: 196 FENH-LISEGNFFQWLP-HSELVTPIYGVYFLFLTALVVG 233


>ref|XP_002280623.1| PREDICTED: uncharacterized protein LOC100251828 [Vitis vinifera]
           gi|297736482|emb|CBI25353.3| unnamed protein product
           [Vitis vinifera]
          Length = 305

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 75/213 (35%), Positives = 106/213 (49%), Gaps = 5/213 (2%)
 Frame = -1

Query: 624 AQRSDASFLSKIRKMADVNPQVNETQQIIPSPAPIAEKELNQNGINNNNMKLPEESHGKD 445
           A  SDAS LS ++K+A       ET Q  PSP+PI    +N  G           +    
Sbjct: 17  ADGSDASLLSNLQKLARAAKN-EETVQASPSPSPIPS--INGTGGPAKGSSSTAGAPAPS 73

Query: 444 KNIKDGNEGEVTNEKCEEASSISSCKVEGKMTACVKRSETGSQDLMILIQNDGETVLNVS 265
              K    G    E C+   S  +C  +  +TACV        +L +L+ NDGE  L V 
Sbjct: 74  NPPKTDQGGSNNQETCK--GSEMNCHNQN-ITACVFHPANAPMELFLLVNNDGEGTLEVD 130

Query: 264 VI---VPASVEDSTKP-VEIPQHQAKKINASTTVGKAQEITLNTNPGVCVLNTGVLVSEG 97
           V    V ++++D   P ++IP+HQ KKIN S   G    I LN   G C+++ G    + 
Sbjct: 131 VTISPVDSTLKDIQIPKIQIPKHQMKKINVSEYAGSPL-IALN---GDCLIHMGSPPQKD 186

Query: 96  -NFFQRIPSYANLVTPTYGAYFIILVALVVGGT 1
            NFF++ P+YAN VTP +G Y + L AL++GGT
Sbjct: 187 TNFFKQFPAYANQVTPIHGVYLLSLTALLIGGT 219


>ref|XP_003533658.1| PREDICTED: uncharacterized protein LOC100814077 [Glycine max]
          Length = 342

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
 Frame = -1

Query: 621 QRSDASFLSKIRKMADVNPQVNETQQI---IPSPAPIAE--KELNQNGINNNNMKLPEES 457
           Q  D +   +  K    +P  N +  I   +P P P+ +  K  N +   +NN   P   
Sbjct: 40  QPKDPNHAGETNKATGGSPSTNVSGPISSPVPQPQPLPKVMKNTNDDKKKDNNSAPPVSV 99

Query: 456 HGKDKNIKDGNEG-EVTNEKCE-----------EASSISSCKVEGKMTACVKRSETGSQD 313
               KN   G++G +  N+K E                + C  +G M AC+  S+   + 
Sbjct: 100 PPPPKNDDGGDKGLDKENDKIEGMKFSHNSTTETCDGFNKCTDDGGMVACI--SKIDPKY 157

Query: 312 LMILIQNDGETVLNVSVIVPASVEDSTKPVEIPQHQAKKINASTTVGKAQEITLNTNPGV 133
           L++L+ N G+ ++ V +      +++   VE+ + + +K+N + +  K+ ++TLN   G 
Sbjct: 158 LVVLLHNGGDGIIIVKL--RTDFDNNLGDVEVHKSKTEKVNITQSSSKSTQLTLNAGKGD 215

Query: 132 CVLNTGVLVSEGNFFQRIPSYANLVTPTYGAYFIILVALVVGGT 1
           CVL+    + + NF  R+PSY  ++TP  GAYF+IL+ LV GGT
Sbjct: 216 CVLHMVSNIPDENFILRLPSYDKILTPVNGAYFLILMVLVFGGT 259


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