BLASTX nr result

ID: Coptis23_contig00029435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029435
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137995.1| PREDICTED: uncharacterized protein LOC101220...    89   1e-17
ref|XP_004161273.1| PREDICTED: dnaJ homolog subfamily C member 2...    89   1e-17
ref|NP_001062509.1| Os08g0560600 [Oryza sativa Japonica Group] g...    92   6e-17
gb|EAZ43660.1| hypothetical protein OsJ_28286 [Oryza sativa Japo...    92   6e-17
ref|XP_003541437.1| PREDICTED: dnaJ homolog subfamily C member 2...    90   6e-17

>ref|XP_004137995.1| PREDICTED: uncharacterized protein LOC101220350 [Cucumis sativus]
          Length = 272

 Score = 89.4 bits (220), Expect(2) = 1e-17
 Identities = 46/67 (68%), Positives = 52/67 (77%), Gaps = 5/67 (7%)
 Frame = -3

Query: 240 RLETDIINAVEVRI*HSMEEGKFKNLPG-----NLDINPHADPAEDTLYRIISRNKSAPE 76
           R ETD+IN VE RI +SMEEG+F+NLPG     NL INPHADPAEDTLYRI+S+N  APE
Sbjct: 134 RSETDLINVVERRIWNSMEEGQFENLPGKGKPLNLSINPHADPAEDTLYRILSKNGCAPE 193

Query: 75  WVVLITE 55
           WV L  E
Sbjct: 194 WVELNKE 200



 Score = 25.0 bits (53), Expect(2) = 1e-17
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -1

Query: 59  LNKEIWSNIVDWRCPL 12
           LNKEI SNI +WR  L
Sbjct: 197 LNKEIRSNISEWRSSL 212


>ref|XP_004161273.1| PREDICTED: dnaJ homolog subfamily C member 28-like, partial
           [Cucumis sativus]
          Length = 193

 Score = 89.4 bits (220), Expect(2) = 1e-17
 Identities = 46/67 (68%), Positives = 52/67 (77%), Gaps = 5/67 (7%)
 Frame = -3

Query: 240 RLETDIINAVEVRI*HSMEEGKFKNLPG-----NLDINPHADPAEDTLYRIISRNKSAPE 76
           R ETD+IN VE RI +SMEEG+F+NLPG     NL INPHADPAEDTLYRI+S+N  APE
Sbjct: 55  RSETDLINVVERRIWNSMEEGQFENLPGKGKPLNLSINPHADPAEDTLYRILSKNGCAPE 114

Query: 75  WVVLITE 55
           WV L  E
Sbjct: 115 WVELNKE 121



 Score = 25.0 bits (53), Expect(2) = 1e-17
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -1

Query: 59  LNKEIWSNIVDWRCPL 12
           LNKEI SNI +WR  L
Sbjct: 118 LNKEIRSNISEWRSSL 133


>ref|NP_001062509.1| Os08g0560600 [Oryza sativa Japonica Group]
           gi|45736118|dbj|BAD13149.1| unknown protein [Oryza
           sativa Japonica Group] gi|45736164|dbj|BAD13210.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113624478|dbj|BAF24423.1| Os08g0560600 [Oryza sativa
           Japonica Group] gi|125562564|gb|EAZ08012.1| hypothetical
           protein OsI_30278 [Oryza sativa Indica Group]
           gi|215766411|dbj|BAG98639.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 216

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 48/67 (71%), Positives = 51/67 (76%), Gaps = 5/67 (7%)
 Frame = -3

Query: 240 RLETDIINAVEVRI*HSMEEGKFKNLPG-----NLDINPHADPAEDTLYRIISRNKSAPE 76
           R ETDIIN VE RI HSMEEG F+NLPG     NL+ NPHADPAEDTLYRI+SRN  APE
Sbjct: 78  RSETDIINVVEQRIWHSMEEGHFENLPGKGKPLNLNSNPHADPAEDTLYRILSRNGCAPE 137

Query: 75  WVVLITE 55
           WV L  E
Sbjct: 138 WVELNKE 144


>gb|EAZ43660.1| hypothetical protein OsJ_28286 [Oryza sativa Japonica Group]
          Length = 143

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 48/67 (71%), Positives = 51/67 (76%), Gaps = 5/67 (7%)
 Frame = -3

Query: 240 RLETDIINAVEVRI*HSMEEGKFKNLPG-----NLDINPHADPAEDTLYRIISRNKSAPE 76
           R ETDIIN VE RI HSMEEG F+NLPG     NL+ NPHADPAEDTLYRI+SRN  APE
Sbjct: 5   RSETDIINVVEQRIWHSMEEGHFENLPGKGKPLNLNSNPHADPAEDTLYRILSRNGCAPE 64

Query: 75  WVVLITE 55
           WV L  E
Sbjct: 65  WVELNKE 71


>ref|XP_003541437.1| PREDICTED: dnaJ homolog subfamily C member 28-like [Glycine max]
          Length = 212

 Score = 90.1 bits (222), Expect(2) = 6e-17
 Identities = 46/67 (68%), Positives = 51/67 (76%), Gaps = 5/67 (7%)
 Frame = -3

Query: 240 RLETDIINAVEVRI*HSMEEGKFKNLPGN-----LDINPHADPAEDTLYRIISRNKSAPE 76
           R ETD+IN VE RI HSMEEG+F+NLPG      LD NPHADPAEDTLYRI+S+N  APE
Sbjct: 73  RSETDMINVVEQRIWHSMEEGQFENLPGKGKPLKLDTNPHADPAEDTLYRILSKNGCAPE 132

Query: 75  WVVLITE 55
           WV L  E
Sbjct: 133 WVELNKE 139



 Score = 21.9 bits (45), Expect(2) = 6e-17
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 59  LNKEIWSNIVDWR 21
           LNKEI S I +WR
Sbjct: 136 LNKEIRSKISEWR 148


Top